ID HQ283391; SV 1; linear; genomic RNA; STD; VRL; 3042 BP. XX AC HQ283391; XX DT 21-FEB-2011 (Rel. 107, Created) DT 21-FEB-2011 (Rel. 107, Last updated, Version 1) XX DE Cucumber mosaic virus isolate SFQT1-2 segment RNA2, complete sequence. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3042 RA Du Y., Xiang B.; RT "Complete nucleotide sequence of the RNA2 of Cucumber mosaic virus RT infecting processing tomato in Xinjiang"; RL Unpublished. XX RN [2] RP 1-3042 RA Du Y., Xiang B.; RT ; RL Submitted (27-AUG-2010) to the INSDC. RL Phytopathology, ShiHeZi University, ShiHeZi, Xinjiang 8320003, China XX DR MD5; 22e0ad612904cdef958b96da6720e58f. DR RFAM; RF01084; TLS-PK3. XX CC GenBank Accession Numbers HQ283391-HQ283394 represent the complete CC genome of Cucumber mosaic virus SFQT1-2. XX FH Key Location/Qualifiers FH FT source 1..3042 FT /organism="Cucumber mosaic virus" FT /segment="RNA2" FT /host="tomato" FT /isolate="SFQT1-2" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:12305" FT CDS 80..2653 FT /codon_start=1 FT /product="2a" FT /db_xref="GOA:F1CGZ1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:F1CGZ1" FT /protein_id="ADX86742.1" FT /translation="MAFPAPAFSLANLLNGTYGVDTPEEVERVRSEQHEEAAAACRNYK FT PLPAVDVSESVTEDAHSLRTPDGAPSEEVSVELVTYGAEDYLEKSDDELLVAFETMVKP FT MRIGQLWCPAFNKCSFISSIAMARALLLVPSTSNRTMKCFEDLVAAIYTKSDFFYDDEC FT EADDIQTNVSSRDVPGYSFEPWSRTSGFEPPPICEACDMIMYQCPCFDFNALKKSCAER FT TFADDYVIEGLDGVVDNATLLSNLGPFLVPVKCQYEKCPTPTVAIPPSLNRATDRVDIN FT LVQSICDSTLPTHSNYDDSFHQVFVESADYSIDLDHVRLRQSDLIAKIPDSGHMIPVLN FT TGSGHKRVGTTKEVLTAIKKRNADVPELGDSVNLSRLSKAVAERFFISYINGNSLATSN FT FVNVVSNFHDYMEKWKSSGLSYDDLPDLHAENLQFYDHMIKSDVKPVVSDTLNIDRPVP FT ATITYHKKGITSQFTPLFTALFERFQRCLRERIILLWKDSSLEMSGFDVKNKHCLEIDL FT SKFDKSQGEFHLMIQEHILNGLGCPAPITKWWCDFHRFSYIRDRRAGVGMPISFQRRTG FT DAFTYFGNTIVTVAEFAWCYDTDQFEKLLFSGDDSLGFSVLPPVGDPSKFTTLFNMEAK FT VMEPAVPYICSKFLLSDEFGNTFSVPDPLREVQRLGTKKIPYSDNDEFLFAHFMSFVDR FT LKFLDRMTQSCIDQLSLFFELKYRKSGEEAALMLGAFKKYTANFQSYKELYFSDRRQCE FT LINSFSCVEFRTERSSFIKQRKKKDGIERRRNDKRRTPTGPHGGGEETETKVSQEESTG FT TMLQKSQRESAFKSQTVPLSTVLSNRWFGTDRDVPPRERGGIVRV" FT CDS 2412..2747 FT /codon_start=1 FT /product="2b" FT /db_xref="InterPro:IPR004946" FT /db_xref="UniProtKB/TrEMBL:F1CGZ2" FT /protein_id="ADX86743.1" FT /translation="MELNEGAMTNVELQLARMVEVKRQRRRSHKKNRRERCYKSPSERA FT RSNLRLFRFLPFYQIDGSELIEMYRHVNVAELSESEAPRFTLPAEDDHDFDDTDWFAGN FT EWAEGAF" XX SQ Sequence 3042 BP; 757 A; 680 C; 719 G; 886 T; 0 other; gtttatttac aagagcgtac ggttcaaccc ctgcctcccc tgtaaaaatt ccctagactt 60 tctagtttct ttctttccta tggctttccc tgcccccgct ttctcattgg ccaatctttt 120 gaatggtact tacggtgtcg acactcccga ggaagtggaa cgtgtgcgat ctgagcaaca 180 cgaagaggct gctgcggctt gtcgtaatta caagccctta cccgctgtgg atgtcagcga 240 gagtgtcaca gaggatgcgc attccctccg aactccagac ggagctccct ctgaagaggt 300 gtctgttgag cttgttactt atggtgctga agattacctt gaaaaatctg atgatgagct 360 ccttgtcgct tttgagacga tggtcaaacc catgcgtatc ggacagttat ggtgccctgc 420 gtttaataaa tgttctttta tttccagcat tgctatggct agagctttgc tgttggtacc 480 tagcacatcc aaccgaacca tgaagtgttt tgaagacctg gtcgcggcta tttacactaa 540 atccgatttc ttttatgatg atgagtgtga agctgacgac attcagacaa atgtctcgtc 600 tcgcgatgta cccggttact ctttcgaacc gtggtcccga acatctggat ttgaaccacc 660 gcctatctgc gaggcgtgtg acatgatcat gtaccagtgc ccgtgttttg attttaatgc 720 tttaaagaaa tcgtgcgctg agaggacttt cgctgatgat tatgttattg aaggtttaga 780 tggtgttgtt gacaatgcaa ctttgttgtc taatttaggc ccgtttttgg tgcctgtgaa 840 gtgccaatac gagaaatgtc caacacccac cgtcgcgatt cctccgagct taaatcgtgc 900 tactgatcgt gttgatatca atttagttca atccatttgt gattccactc tgcccacgca 960 cagcaactac gatgactctt ttcatcaagt gttcgtcgaa agcgctgatt attctattga 1020 tctggatcat gttagacttc ggcaatctga tctcattgcg aaaattccag attcagggca 1080 tatgataccg gttttgaata ccgggagtgg tcacaagaga gtaggtacga cgaaggaggt 1140 ccttacagca atcaagaaac gtaatgctga cgttccagag ctaggtgatt ccgttaatct 1200 gtccaggttg agtaaggctg tggctgagag atttttcatt tcgtacatca atggcaactc 1260 tttagccacc agcaactttg ttaacgtcgt tagcaacttc cacgattaca tggaaaaatg 1320 gaagtcttca ggcctctcgt atgacgatct tccagatctg catgctgaga atttgcagtt 1380 ttatgatcac atgataaaat ctgatgtgaa gcctgtcgtt agcgacacat tgaacattga 1440 cagaccggtc ccagctacta taacgtatca caagaaaggt ataacctccc agttcacacc 1500 gttattcaca gctctatttg agcgtttcca gagatgcctt cgagaacgta ttatcctcct 1560 gtggaaagat tcatcccttg agatgtcagg atttgatgtt aagaacaaac attgtctcga 1620 gatcgatttg tccaaattcg acaagtctca aggtgaattc catttgatga ttcaggaaca 1680 cattttgaat ggtctagggt gcccagctcc gataactaag tggtggtgtg atttccacag 1740 attctcttac attagagacc gtagagctgg tgttggtatg cctatcagtt tccagagacg 1800 aactggtgat gcatttacct acttcggtaa caccattgtc accgtggctg aatttgcatg 1860 gtgttacgac accgaccaat tcgaaaagct tttattctca ggcgatgatt ctctaggatt 1920 ttcagtgctt ccccctgttg gtgatccgag taagttcaca actcttttca acatggaagc 1980 taaggtgatg gagccagcag taccatacat ttgttcgaag tttctactct ctgacgagtt 2040 cggtaatacc ttttccgttc cagatccatt gcgcgaggtt cagcggttag gaactaagaa 2100 aatcccctat tccgacaatg atgaattcct gtttgctcac ttcatgagct ttgttgatcg 2160 attgaagttt ttggaccgaa tgactcagtc ttgcatcgat cagctttcac tcttctttga 2220 gttgaaatac aggaagtctg gggaggaggc tgccttgatg ttaggcgcct ttaagaaata 2280 taccgctaat ttccagtcct acaaagaact ctatttttca gatcgtcgtc agtgcgaatt 2340 gatcaattcg tttagttgtg tagagtttag gactgagcgt tcgagtttca ttaagcagcg 2400 aaagaagaaa gatggaattg aacgaaggcg caatgacaaa cgtcgaactc caactggccc 2460 gcatggtgga ggtgaagaga cagagacgaa ggtctcacaa gaagaatcga cgggaacgat 2520 gttacaaaag tcccagcgag agagcgcgtt caaatctcag actgttccgc tttctaccgt 2580 tctatcaaat agatggttcg gaactgatag agatgtaccg ccacgtgaac gtggcggaat 2640 tgtccgagtc tgaggctcct cgttttacgc taccagcgga agatgaccat gattttgacg 2700 atacagattg gttcgctggt aacgagtggg cggaaggtgc gttctgaacc ctccttcctt 2760 tctccctccg gttttctgag gcgggagctg agttggcagt attgctacaa actgtctgaa 2820 gtcactaaac ggtttacggt gaacgggttg tccatccagc taacggctaa aatggtcagt 2880 cgtggagaaa tccgcgccgg agacttacaa gtctctgagg cacctttgaa accatctcct 2940 aggtttcttc ggaaggactt cggtctgtgt acttctagca caagatgcta gtttagggta 3000 cgggtgcccc cccgcttcgc gggggcttct aaaaggagac ca 3042 //