ID   HQ267711; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   HQ267711;
XX
DT   28-MAR-2011 (Rel. 108, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Tomato spotted wilt virus isolate TSWV-Njc nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-777
RA   Chung B.N.;
RT   "TSWV isolates showing different pathotype in red pepper";
RL   Unpublished.
XX
RN   [2]
RP   1-777
RA   Chung B.N.;
RT   ;
RL   Submitted (17-SEP-2010) to the INSDC.
RL   Horticultural Herbal and Environment Department, National Institute of
RL   Horticultural & Herbal Science, 540-41, Top-Don, Kwonsun-Gu, Suwon 441-440,
RL   Korea
XX
DR   MD5; 3d5cbeb6c057b71ee2188996c80621dd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..777
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /host="Capsicum annuum"
FT                   /isolate="TSWV-Njc"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="Jul-2010"
FT                   /db_xref="taxon:3052585"
FT   gene            1..777
FT                   /gene="N"
FT   CDS             1..777
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:E5KYI0"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:E5KYI0"
FT                   /protein_id="ADZ99442.1"
FT                   /translation="MSKVKLTKENIVALLTQGKDLEFEENQNLVAFNFKTFCLENLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFGMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 777 BP; 259 A; 129 C; 170 G; 219 T; 0 other;
     atgtctaagg ttaagctcac taaggaaaac attgttgctt tgttgacaca aggcaaagac        60
     cttgaatttg aggaaaatca gaatctggta gcattcaact tcaagacttt ttgtctagaa       120
     aaccttgacc agatcaagaa gatgagcatt atttcatgtc tgacatttct gaagaatcgt       180
     cagagtataa tgaaggtcat taagcaaagt gattttactt ttggtaaaat taccataaag       240
     aaaacttcag acaggattgg agccactgac atgaccttca gaaggcttga tagcttaatc       300
     agggtcaggc ttgtcgagga aactggaaat tctgagaatc tcaatactat caaatctaag       360
     attgcttctc accctttgat tcaagcttat ggattacctc ttgatgatgc gaagtctgtg       420
     aggcttgcca taatgctggg aggtagctta cctcttattg cttcagttga tagctttgaa       480
     atgatcagtg ttgtcttggc tatatatcag gatgcaaaat acaaagacct cgggatcgat       540
     ccaaagaagt acgacacaaa ggaagcctta gggaaagttt gcactgtgct gaaaagcaaa       600
     gcatttggaa tgaatgaaga tcaggttaag aaagggaaag agtatgctgc tatacttagt       660
     tccagcaatc ctaatgctaa aggaagtgtt gctatggaac attacagtga aactcttaac       720
     aagttctatg agatgttcgg ggttaaaaaa caggcaaaac ttgcagaact tgcttaa          777
//