ID   HQ260981; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   HQ260981;
XX
DT   06-DEC-2010 (Rel. 107, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 2)
XX
DE   Tomato spotted wilt virus isolate TSWV-Njj nucleocapsid protein (N) gene,
DE   complete cds.
XX
KW   .
XX
OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-777
RA   Chung B.N.;
RT   "TSWV isolates showing different pathotype in red pepper";
RL   Unpublished.
XX
RN   [2]
RP   1-777
RA   Chung B.N.;
RT   ;
RL   Submitted (14-SEP-2010) to the INSDC.
RL   Horticultural Herbal & Environment Department, National Institute of
RL   Horticultural & Herbal Science, 540-41, Top-dong, Kwon-sun Gu, Suwon
RL   441-440, Rep. of Korea
XX
DR   MD5; ca2b811155e9751ccf859277f1a921d0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..777
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /host="Capsicum annuum"
FT                   /isolate="TSWV-Njj"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /db_xref="taxon:3052585"
FT   gene            complement(1..777)
FT                   /gene="N"
FT   CDS             complement(1..777)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:E5KYI0"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:E5KYI0"
FT                   /protein_id="ADR32111.1"
FT                   /translation="MSKVKLTKENIVALLTQGKDLEFEENQNLVAFNFKTFCLENLDQI
FT                   KKMSIISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTKEALGKVCTVLKSKAFGMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSVAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 777 BP; 219 A; 170 C; 129 G; 259 T; 0 other;
     ttaagcaagt tctgcaagtt ttgcctgttt tttaaccccg aacatctcat agaacttgtt        60
     aagagtttca ctgtaatgtt ccatagcaac acttccttta gcattaggat tgctggaact       120
     aagtatagca gcatactctt tccctttctt aacctgatct tcattcattc caaatgcttt       180
     gcttttcagc acagtgcaaa ctttccctaa ggcttccttt gtgtcgtact tctttggatc       240
     gatcccgagg tctttgtatt ttgcatcctg atatatagcc aagacaacac tgatcatttc       300
     aaagctatca actgaagcaa taagaggtaa gctacctccc agcattatgg caagcctcac       360
     agacttcgca tcatcaagag gtaatccata agcttgaatc aaagggtgag aagcaatctt       420
     agatttgata gtattgagat tctcagaatt tccagtttcc tcgacaagcc tgaccctgat       480
     taagctatca agccttctga aggtcatgtc agtggctcca atcctgtctg aagttttctt       540
     tatggtaatt ttaccaaaag taaaatcact ttgcttaatg accttcatta tactctgacg       600
     attcttcaga aatgtcagac atgaaataat gctcatcttc ttgatctggt caaggttttc       660
     tagacaaaaa gtcttgaagt tgaatgctac cagattctga ttttcctcaa attcaaggtc       720
     tttgccttgt gtcaacaaag caacaatgtt ttccttagtg agcttaacct tagacat          777
//