ID   HQ245326; SV 1; linear; genomic RNA; STD; VRL; 1284 BP.
XX
AC   HQ245326;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   07-JUN-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Sugarcane yellow leaf virus isolate CHN-GD-GZ10-3,coat protein and movement
DE   protein mRNA,complete cds;putative aphid transmission factor mRNA,partial
DE   cds.
XX
KW   .
XX
OS   Sugarcane yellow leaf virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1284
RA   Wang M., Xu D., Zhou G., Li R.;
RT   "Evaluation of genetic diversity of Sugarcane yellow leaf virus in China by
RT   RT-PCR-RFLP analysis and nucleotide sequencing of viral genome";
RL   Unpublished.
XX
RN   [2]
RP   1-1284
RA   Wang M., Xu D., Zhou G., Li R.;
RT   ;
RL   Submitted (10-SEP-2010) to the INSDC.
RL   College of Natural Resources and Environment, Plant Pathology, Laboratory
RL   of Plant Virology, South China Agricultural University, Tianhe, Wushan,
RL   Guangzhou, Guangdong 510642, China
XX
DR   MD5; 99a9ec980c159f2b8d305a55d060619e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1284
FT                   /organism="Sugarcane yellow leaf virus"
FT                   /host="Saccharum hybrid cultivar CP93-1634"
FT                   /isolate="CHN-GD-GZ10-3"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="leaf"
FT                   /collection_date="Jan-2009"
FT                   /db_xref="taxon:94290"
FT   CDS             31..>1284
FT                   /codon_start=1
FT                   /transl_except=(pos:619..621,aa:OTHER)
FT                   /product="putative aphid transmission factor"
FT                   /note="produced by translational readthrough of TAG stop
FT                   codon of ORF 3"
FT                   /db_xref="GOA:F8RUH1"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:F8RUH1"
FT                   /protein_id="AEG89018.1"
FT                   /translation="MNTGANRSRRNVRRRANRRRQTRPVVVVRPAAGPRRVRRRRARVG
FT                   GDAVRGPGGRSNRDVLTFTIDDLKASSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNTCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKTFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDGSLAGQFVCRFECLFQNPKXVDDAPPTPIPQPTPPAPAPAPAPKY
FT                   FGYQGVPNNIIKTRGNSEYLDVGQLDSVTMYLWKDESWSIEKLSAGYRVNNRDRAIPYL
FT                   LIPVEKGKYSVFIQCEGFKAVKAKGGTNDGKMSGFICDNVNLQGWRAYAYTGCSISNYK
FT                   TADSNVPGLPDMRVNNCSFTDQLVERDFSCSFHLEVPQQGYFGLEAPPIEKSDHFNFVV
FT                   SYANFTEKIMEWGSVSIAI"
FT   CDS             31..621
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:F8RUH2"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:F8RUH2"
FT                   /protein_id="AEG89016.1"
FT                   /translation="MNTGANRSRRNVRRRANRRRQTRPVVVVRPAAGPRRVRRRRARVG
FT                   GDAVRGPGGRSNRDVLTFTIDDLKASSTGILKFGPNLSQYAAFNNGLLKAYHEYKITSL
FT                   TIQYNTCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKTFPAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDGSLAGQFVCRFECLFQNPK"
FT   CDS             62..514
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:F8RUH3"
FT                   /protein_id="AEG89017.1"
FT                   /translation="MSEDALTVVDRLGQWSWSGLPQDLDEYDDVEHVLEETLCEDREEE
FT                   ATGMFSLSRLTISRPAQPGSSNSDRTYLSTQRSTMAYSKPTMSIKSQVSLFSITHAPPT
FT                   QLQVQSHLKWIHPAPKQQQAPRLQASPSRGTPRKPSRPPSSGGKIS"
XX
SQ   Sequence 1284 BP; 371 A; 328 C; 298 G; 287 T; 0 other;
     aaatcagtgc acatatccga gcgattgtta atgaatacgg gcgctaaccg ctcacgaagg        60
     aatgtcagaa gacgcgctaa ccgtcgtcga cagactcggc cagtggtcgt ggtccggcct       120
     gccgcaggac ctagacgagt acgacgacgt agagcacgtg ttggaggaga cgctgtgcga       180
     ggaccgggag gaagaagcaa cagggatgtt ctcactttca cgattgacga tctcaaggcc       240
     agctcaaccg ggatcctcaa attcggaccg aacttatctc agtacgcagc gttcaacaat       300
     ggcttactca aagcctacca tgagtataaa atcacaagtc tcactattca gtataacaca       360
     tgctcctccg acgcaactcc aggtgcaatc gcacttgaag tggatacatc ctgctcccaa       420
     acaacaacag gctccaagat tacaagcttc cccgtcaaga ggaacgccaa gaaaaccttc       480
     ccggccccct tcatcagggg gaaagatttc atgactacat cagctgatca gttctggctt       540
     ttgtacaaag ggaatgggga cggaagccta gcaggacaat tcgtctgccg atttgaatgt       600
     ttattccaga atcccaaata ggtagacgac gctcccccaa cacccatacc acaaccaacc       660
     ccacccgccc cggccccggc accagcacct aaatattttg gatatcaagg tgtgccgaac       720
     aacatcatca aaactcgagg taactcagag tatcttgatg tgggccaact cgatagcgtg       780
     accatgtacc tttggaaaga tgaatcatgg agcatcgaga aactgtcagc cggataccga       840
     gtcaacaatc gcgaccgtgc cataccttat ctcctcattc ctgtggagaa aggaaaatac       900
     tccgtgttca tacaatgtga gggctttaag gcagtaaaag ccaaaggagg cacgaatgac       960
     ggcaaaatga gcgggtttat ttgcgacaat gtaaatcttc agggttggag agcgtacgca      1020
     tatactgggt gttcaatctc taattacaag acagctgact caaatgtccc cggtcttcca      1080
     gacatgagag taaacaactg ttcttttacc gaccagttgg tcgagagaga tttttcttgt      1140
     tcatttcacc tcgaggtgcc tcaacaaggc tattttggtc tagaggcccc acccattgaa      1200
     aagagtgatc atttcaattt cgtggtgtct tacgctaatt tcactgagaa aatcatggaa      1260
     tggggatcag tctccatagc gata                                             1284
//