ID   HQ245324; SV 1; linear; genomic RNA; STD; VRL; 1284 BP.
XX
AC   HQ245324;
XX
DT   07-JUN-2011 (Rel. 109, Created)
DT   07-JUN-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Sugarcane yellow leaf virus isolate CHN-GD-GZ10-1,coat protein and movement
DE   protein mRNA,complete cds;putative aphid transmission factor mRNA,partial
DE   cds.
XX
KW   .
XX
OS   Sugarcane yellow leaf virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1284
RA   Wang M., Xu D., Zhou G., Li R.;
RT   "Evaluation of genetic diversity of Sugarcane yellow leaf virus in China by
RT   RT-PCR-RFLP analysis and nucleotide sequencing of viral genome";
RL   Unpublished.
XX
RN   [2]
RP   1-1284
RA   Wang M., Xu D., Zhou G., Li R.;
RT   ;
RL   Submitted (10-SEP-2010) to the INSDC.
RL   College of Natural Resources and Environment, Plant Pathology, Laboratory
RL   of Plant Virology, South China Agricultural University, Tianhe, Wushan,
RL   Guangzhou, Guangdong 510642, China
XX
DR   MD5; 4aa737051569416ffe31b0960942cdd5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1284
FT                   /organism="Sugarcane yellow leaf virus"
FT                   /host="Saccharum hybrid cultivar CP93-1634"
FT                   /isolate="CHN-GD-GZ10-1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="leaf"
FT                   /collection_date="Jan-2009"
FT                   /db_xref="taxon:94290"
FT   CDS             31..>1284
FT                   /codon_start=1
FT                   /transl_except=(pos:619..621,aa:OTHER)
FT                   /product="putative aphid transmission factor"
FT                   /note="produced by translational readthrough of TAG stop
FT                   codon of ORF 3"
FT                   /db_xref="GOA:F8RUG5"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:F8RUG5"
FT                   /protein_id="AEG89010.1"
FT                   /translation="MNTGANRSRRNVRGRANRRRQTRPVVVVRPAAGPRRVRRRRARVG
FT                   GNAVRGPGGRSNRDVLTFTVDDLKANSTGILKFGPNLSQYAAFDNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKVFSAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDSSLAGQFVCRFECLFQNPKXVDDAPPTPTPQPTPPAPAPAPAPKY
FT                   FGYQGVPNNIIKTRGNSEYLDVGQLDSVTMYLWKDESWSIEKLSAGYRVNNRDRAIPYL
FT                   LIPVEKGKYSVFIQCEGFKAVKAKGGTNDGKMSGFICDNVNLQGWRAYAYTGCSISNYK
FT                   TADSNVPGHPDMRVNNCSFTDQLVERDFSCSFHLEVPQQGYFGLEAPPIEKSDHFNFVV
FT                   SYANFTEKIMEWGSVSIAI"
FT   CDS             31..621
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:F8RUG6"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:F8RUG6"
FT                   /protein_id="AEG89011.1"
FT                   /translation="MNTGANRSRRNVRGRANRRRQTRPVVVVRPAAGPRRVRRRRARVG
FT                   GNAVRGPGGRSNRDVLTFTVDDLKANSTGILKFGPNLSQYAAFDNGLLKAYHEYKITSL
FT                   TIQYNSCSSDATPGAIALEVDTSCSQTTTGSKITSFPVKRNAKKVFSAPFIRGKDFMTT
FT                   SADQFWLLYKGNGDSSLAGQFVCRFECLFQNPK"
FT   CDS             62..514
FT                   /codon_start=1
FT                   /product="movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WI47"
FT                   /protein_id="AEG89012.1"
FT                   /translation="MSEDALTVVDRLGQWSWSGLPQDLDEYDDVEHVLEETLCEDREEE
FT                   ATGMFSLSRLTISKPTQPGSSNSDRTYLSTQRSTMAYSKPTMSIKSQVSLFSITHAPPT
FT                   QLQVQSHLKWIHPAPKQQQAPRLLASPSRGTPRKSSRPPSSGGKIS"
XX
SQ   Sequence 1284 BP; 367 A; 330 C; 299 G; 288 T; 0 other;
     aaatcagtgc acatatccga gcgattgtta atgaatacgg gcgctaaccg ctcacgaagg        60
     aatgtcagag gacgcgctaa ccgtcgtcga cagactcggc cagtggtcgt ggtccggcct       120
     gccgcaggac ctagacgagt acgacgacgt agagcacgtg ttggaggaaa cgctgtgcga       180
     ggaccgggag gaagaagcaa ccgggatgtt ctcactttca cggttgacga tctcaaagcc       240
     aactcaaccg ggatcctcaa attcggaccg aacttatctc agtacgcagc gttcgacaat       300
     ggcttactca aagcctacca tgagtataaa atcacaagtc tcactattca gtataactca       360
     tgctcctccg acgcaactcc aggtgcaatc gcacttgaag tggatacatc ctgctcccaa       420
     acaacaacag gctccaagat tactagcttc cccgtcaaga ggaacgccaa gaaagtcttc       480
     tcggccccct tcatcagggg gaaagatttc atgactacgt cagctgacca gttttggttg       540
     ctgtacaaag ggaatggaga ctcgagccta gcaggacaat tcgtctgccg atttgaatgc       600
     cttttccaga atcccaaata ggtagacgac gctcccccaa cacccacacc acaaccaacc       660
     ccacccgccc cggccccggc accagcacct aaatattttg gatatcaagg tgtgccgaac       720
     aacatcatca aaactcgagg taactcagag tatcttgatg tgggccaact cgatagcgtg       780
     accatgtacc tttggaaaga tgaatcatgg agcatcgaga aactgtcagc cggataccga       840
     gtcaacaatc gagaccgtgc cataccttat ctcctcattc ctgtggagaa aggaaaatac       900
     tccgtgttca tacaatgtga gggctttaag gcagtaaaag ccaaaggagg cacgaatgac       960
     ggcaaaatga gcgggtttat ttgcgacaat gtaaatcttc agggttggag agcgtacgca      1020
     tatactgggt gttcaatctc taattacaag acagctgact caaatgtccc cggtcatcca      1080
     gacatgagag taaacaactg ttcttttacc gaccagttgg tcgagagaga tttttcttgt      1140
     tcatttcacc tcgaggtgcc tcaacaaggc tattttggtc tagaggcccc acccattgaa      1200
     aagagtgatc atttcaattt cgtggtgtct tacgctaatt tcactgagaa aatcatggaa      1260
     tggggatcag tctccatagc gata                                             1284
//