ID   HQ189459; SV 1; linear; genomic RNA; STD; VRL; 2050 BP.
XX
AC   HQ189459;
XX
DT   09-FEB-2011 (Rel. 107, Created)
DT   10-JAN-2012 (Rel. 111, Last updated, Version 2)
XX
DE   Heterobasidion RNA virus 6 strain HetRV6-ab6 putative RNA-dependent RNA
DE   polymerase gene, complete cds.
XX
KW   .
XX
OS   Heterobasidion RNA virus 6
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-2050
RX   PUBMED; 22138214.
RA   Vainio E.J., Hyder R., Aday G., Hansen E., Piri T., Dogmus-Lehtijarvi T.,
RA   Lehtijarvi A., Korhonen K., Hantula J.;
RT   "Population structure of a novel putative mycovirus infecting the conifer
RT   root-rot fungus Heterobasidion annosum sensu lato";
RL   Virology 422(2):366-376(2012).
XX
RN   [2]
RP   1-2050
RA   Vainio E.J.;
RT   ;
RL   Submitted (27-AUG-2010) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1,
RL   Vantaa 01301, Finland
XX
DR   MD5; 3bd1c7bef638ebe51d88253e89b946ea.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2050
FT                   /organism="Heterobasidion RNA virus 6"
FT                   /host="Heterobasidion abietinum"
FT                   /strain="HetRV6-ab6"
FT                   /isolate="04188"
FT                   /mol_type="genomic RNA"
FT                   /country="Turkey"
FT                   /collected_by="Tugba Dogmus-Lehtijarvi & Asko Lehtijarvi"
FT                   /db_xref="taxon:980634"
FT   CDS             76..1896
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:E9M499"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="UniProtKB/TrEMBL:E9M499"
FT                   /protein_id="ADW82833.1"
FT                   /translation="MSTPSSFQNISLPPTPRFKRLRDEEEDASSSSYTGTSRSVLTGDN
FT                   SDGTSHAERRKKRRKTKKELFAEGEVGELIRRFDKLRYVARAVPYRALDRQPILADPDP
FT                   VMVEYMKTHPEVRIPCDPAEWVFVKANSVVELNHLDRFNRTYTDLTMEHMPAVTLAAGH
FT                   VEDLLRLPAAIVFPTIDDLDKVRFQGDKFAGVEYAQIGMKSRREAHERGLLDAREAWEK
FT                   LMRGEAVTPQLNRIGGRGKLTTKKKFEASGEKPTAGRLIFMTGHRDLLLNGVTEQLLTN
FT                   AYRPDEYPVSVGNSWWHDGCRRFFERFKKWELFHCFDAAKFDSSLPPWLIKISLNILRS
FT                   AFFDAWNPKYDAYWEFVFQGLVYAPVYLDNGLMFIRNGGSTSGHSYNTLMQSICTLVMI
FT                   YACMIELLGADRAEEVFANMWAEGLGDDQHTGMSGPLIKYDIDDIAPVALAIAGIDWTG
FT                   DKSFNTGRLVDTKLGDFQGTQYLGKYFRILDEDVGGIRAQGVVPYRPFDETFLRLYYPE
FT                   RGDQGWTDAWMRAVGHYADGAGNPETREFLEGYLDWLEDKVESDKFEWDEKWKRKFNNH
FT                   DLNRAVPVPARRISYEDWLGLVLIDPSGED"
XX
SQ   Sequence 2050 BP; 451 A; 525 C; 639 G; 435 T; 0 other;
     caataaagaa gggacctcag ggggttttca tttcgaacga aagcttttcc tcctaagcac        60
     tttgctcagt ctcccatgtc aactccatcc tcatttcaga acatttcttt gccgccaacc       120
     ccccgtttca aacgcctccg cgacgaggag gaagacgcct cctcgtcaag ctataccggg       180
     acttcgcgtt cagtcttgac gggggacaac tcggacggca ccagccacgc ggaacgcagg       240
     aagaagagac gcaagaccaa gaaggagtta ttcgcggagg gggaggtcgg cgagcttatc       300
     cgacgattcg acaagctgcg ctacgtagct agggcggtac cttaccgcgc cttggaccgc       360
     caaccgatct tggcggatcc agatcccgtg atggtggagt acatgaagac ccatccggag       420
     gtacggatcc cgtgtgatcc cgcggagtgg gtctttgtca aagccaactc ggtcgtcgaa       480
     ttgaatcacc tggaccgttt caatcgcacc tacaccgacc ttacgatgga gcacatgccc       540
     gcggttactt tggccgctgg acatgtcgag gatctattgc ggttgcccgc cgccatcgtg       600
     ttccctacaa tcgatgacct cgacaaggtg cggtttcagg gggataagtt tgctggagtg       660
     gaatatgcgc agattggcat gaagtcgcgc agagaggccc acgaaagggg gctgctggac       720
     gctagggagg cttgggagaa gctgatgagg ggagaggcgg ttaccccgca gctgaaccgg       780
     atcggcggga ggggcaagct gacaacaaag aagaagttcg aggcgtctgg ggagaagccg       840
     accgcaggcc ggctgatctt catgacgggg caccgcgatc ttctgttgaa cggcgtcacc       900
     gagcagttgt tgaccaacgc ttaccggccc gatgagtacc ctgtttcagt gggaaattcg       960
     tggtggcacg acggatgtcg tcgcttcttt gaaagattca agaagtggga gctgttccac      1020
     tgtttcgacg ccgcgaagtt tgattcgtcg ctacccccgt ggctcatcaa gattagtttg      1080
     aacatcttga gaagcgcgtt cttcgacgcg tggaacccga aatatgacgc ctactgggag      1140
     ttcgtcttcc aggggttagt ctacgctcca gtatacctgg ataatgggtt gatgttcatc      1200
     cgaaatggtg ggtcaaccag cggccactcc tacaatactc tcatgcagtc gatctgcacc      1260
     ttggtcatga tctacgcctg catgatcgag ctattgggag cggacagggc ggaggaggtt      1320
     ttcgcgaaca tgtgggcaga ggggcttgga gacgaccagc acactggcat gagtggtccg      1380
     ctgatcaagt acgacatcga tgatatcgca ccagtggccc tcgccatcgc aggtattgat      1440
     tggactggcg ataagtcttt caacaccggg cggctcgtcg acacgaaact gggagatttc      1500
     cagggtactc agtaccttgg aaaatacttt cgcattcttg acgaggatgt gggtgggatc      1560
     cgggcacagg gtgtagtccc ctaccgcccg ttcgatgaga ccttcctccg attgtactac      1620
     ccagagaggg gggatcaagg ctggacggac gcttggatgc gcgcggttgg acattacgcg      1680
     gacggagccg gtaatccgga gacgcgggag ttcctggagg gatacttgga ctggttggag      1740
     gataaggtcg agtcggataa gtttgagtgg gacgagaagt ggaagcgtaa gttcaacaac      1800
     cacgacctca acagggccgt ccccgttcca gcacggcgga tttcgtacga ggactggtta      1860
     gggttggtgt tgattgatcc gagcggcgag gactaggttt accccaacga gggggcgtag      1920
     acacattagg aacttaaaca gacagccact tggaccccgg ggtccgctcc ctcgaagtct      1980
     ttccatcggg tctgcacact tgatggggga tgttcggagg ggcggccccc ggaaggtcct      2040
     cgggttgctg                                                             2050
//