ID HQ185235; SV 1; circular; genomic DNA; STD; VRL; 2590 BP. XX AC HQ185235; XX DT 31-OCT-2010 (Rel. 106, Created) DT 31-OCT-2010 (Rel. 106, Last updated, Version 1) XX DE Euphorbia mosaic virus isolate Jalisco segment DNA-B, complete sequence. XX KW . XX OS Euphorbia mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2590 RX PUBMED; 20958988. RA Gregorio-Jorge J., Bernal-Alcocer A., Banuelos-Hernandez B., RA Alpuche-Solis A.G., Hernandez-Zepeda C., Moreno-Valenzuela O., RA Frias-Trevino G., Arguello-Astorga G.R.; RT "Analysis of a new strain of Euphorbia mosaic virus with distinct RT replication specificity unveils a lineage of begomoviruses with short Rep RT sequences in the DNA-B intergenic region"; RL Virol J 7:275-275(2010). XX RN [2] RP 1-2590 RA Gregorio-Jorge J., Bernal-Alcocer A., Banuelos-Hernandez B., RA Alpuche Solis A., Arguello-Astorga G.; RT ; RL Submitted (26-AUG-2010) to the INSDC. RL Molecular Biology, IPICYT, Camino a la Presa San Jose 2055, San Luis RL Potosi, SLP 78216, Mexico XX DR MD5; 0f01fc0abd80795cdd6cbdfdd4e19a92. DR EuropePMC; PMC2974675; 20958988. XX FH Key Location/Qualifiers FH FT source 1..2590 FT /organism="Euphorbia mosaic virus" FT /segment="DNA-B" FT /host="pepper" FT /isolate="Jalisco" FT /mol_type="genomic DNA" FT /country="Mexico" FT /collection_date="2005" FT /db_xref="taxon:77811" FT gene 519..1289 FT /gene="BV1" FT CDS 519..1289 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /note="BR1; NSP; nucleus-cytoplasm transport of viral DNA" FT /db_xref="GOA:E3VRC4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:E3VRC4" FT /protein_id="ADP00517.1" FT /translation="MYLSKYRRGGSTSQRRGNSRHTIFRRPNFMRRVDYRRRPGSPNKA FT HDDSKMINQRIHEDQFGPEFVLAHNMALSSYISFPSLTRTEPNRSRSYIKLRRLRYKGT FT LKIERVQSDMNLDGSSSKIEGVFTMVVVVDRKPHLNPTGCLHSFDDLFGARIHSHGNLT FT ITPSLKDRFYIRHVMKRVLSVEKDSLMVDLEGSTALSNKRVNCWAAFRDLDRDSCNGVY FT ANISKNALLVYYCWMSDAMSKASTFVSFDLDYLG" FT gene complement(1377..2246) FT /gene="BC1" FT CDS complement(1377..2246) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /note="BL1; MP" FT /db_xref="GOA:E3VRC5" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:E3VRC5" FT /protein_id="ADP00518.1" FT /translation="MDSQLVTPPNVFNYIESRRDEYQLSHDLTEIVLQFPSTASQLSAR FT LSRSCMKIDHCVIEYRQQVPINASGTVVVEIHDKRMTDDESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPVPWKLYYKVCDTNVHQMTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDIDFSHVGYGKWERRMIKSASSRYGLPGPIAINPGESWASRSTIGPAHSNADS FT DEMHPYRELNRLSTPILDPGDSASVVAAHRAQSNITLSVAQINEIVRSTVQDCINTNCI FT PSNTKSLQ" XX SQ Sequence 2590 BP; 696 A; 557 C; 587 G; 750 T; 0 other; accggatggc cgcgatttgt tcggagtcct ccgttctcgg cccaggccca accgcagtat 60 tctcatgaaa aaacgcaccg ttttggcaac actaacaagg gaccacatac gtactactgg 120 gaccacttag taaatgacaa ttatttttga ccaatcacgc agcgcgtgtc tagcctatat 180 attaacgact tacccgctaa gttgtgtgac tacttattaa aggttatcgg gaattgtcat 240 tttctgcttc aattcaaacg tcgcaagcgg gactgcttaa tatgtctaac gacgtaatgt 300 cattaacttg tggtgaggac cacaatctaa ccctaattct taacatatcc gcagtgcgat 360 gttcccaaag agtccaatga aagttcagct acgaagccta gttattttga tgttcgacat 420 actagttgtg gttaaatatc cgatcagttt cattggatct ctcacgccta tacattcact 480 tgctgatcat ctcacgacta ctagctataa tagttgacat gtatctttct aagtataggc 540 gtggcgggtc gactagtcag cgacgaggta actcaagaca tacaatcttt aggcgtccta 600 attttatgag acgtgttgat tatcgacgtc gacccggtag tcctaacaag gcccacgacg 660 attcgaagat gattaaccaa cgtattcatg aggaccagtt tgggcccgaa tttgtattgg 720 cccataatat ggccttgtcc tcgtacatta gctttcccag tctcacgagg actgaaccca 780 ataggtccag gtcgtacatc aagttacgac gactacgtta taagggcacc ctcaagattg 840 aacgtgttca gtccgacatg aaccttgatg gctcaagctc taagatcgaa ggagtgttca 900 ctatggtcgt tgtagtcgat cgtaaacctc atttgaatcc aactggatgc ctacactctt 960 ttgacgactt atttggagcg aggatccata gtcacggcaa tttgacaatc actccttcgc 1020 tgaaagatcg gttctatata cgtcatgtga tgaaacgtgt attgtctgtc gagaaggact 1080 cgttgatggt cgatcttgaa ggatctacgg cgttatctaa caaacgtgtt aactgctggg 1140 cagcgtttag ggacctcgat agagactcat gtaacggcgt atatgccaat attagcaaga 1200 acgccctatt agtttactac tgctggatgt ccgatgctat gtctaaggcg tcaacgtttg 1260 tatcatttga tttggattat ctcggataaa taataacata tatttcagca taggtgctcg 1320 gtttgatttc ttaattaacg gtcataactc gtaacataaa ttattaaata atttatttat 1380 tgcaacgatt tcgtatttga ggggatacaa tttgtgttga tacagtcctg gaccgtcgac 1440 ctgacgatct cattaatctg ggctacagac agcgttatat ttgattgggc cctatgggct 1500 gcgacgacag atgccgaatc acctgggtcc aggattggtg tactcaacct gtttagttct 1560 ctgtatggat gcatttcgtc cgaatccgca ttcgagtggg ccgggcctat agtacttctg 1620 ctagcccaag actctcctgg attaatagca attgggcctg gaaggccata tctggaggat 1680 gcggatttga tcattcttct ctcccacttg ccataaccaa cgtgactgaa atctatatct 1740 ttgtcggtaa actgcttcga caatatcttg accgtcggcg cccggaaggg tatatcaacg 1800 gaatgtttag ccgtcgataa tttcagttta cctttgaatt ttgcgaaatg tgtcatctga 1860 tggacgttcg tatcgcaaac cttataatac agtttccatg gaaccgggtc ttttagagag 1920 aagaatgaag atgaaaagta gtggagatct atgttgcatc ttatcgggaa agtccacgac 1980 gcttgtaacg actcatcgtc agtcattctc ttgtcgtgaa tctccactac caccgtcccc 2040 gaggcgttga taggtacttg ttgtctatat tctatcacgc aatgatcgat cttcatacag 2100 ctacgactga gcctagcact cagttgagac gccgtggacg gaaattgcaa gacgatctct 2160 gttaggtcat gagacagttg atactcatca cgacgagatt cgatataatt aaagacgttt 2220 gggggtgtta ctaattgaga atccatggcc gcgcagcgga attgctcgac gagtttgaaa 2280 gaggcagata atgatcagtt aagccggaag tgtaccggag gaactgctaa gactaaggaa 2340 gaactaatat ttaggttaac gcccgattga agaagggcta ttggaataga tgttggtgac 2400 ggagtcgatg aataaccttc cttatataga cgaaatgcat agttgttaat ggcatttttg 2460 taattatgac ccaggactcc agggggagct ccctcataaa acctattgtt tgtggagtcc 2520 tggagtccca tttatacata aagcctctag gactccagag gggcacgtgg cggccatccg 2580 caataatatt 2590 //