ID   HQ180392; SV 1; circular; genomic DNA; STD; VRL; 1379 BP.
XX
AC   HQ180392;
XX
DT   13-OCT-2010 (Rel. 106, Created)
DT   18-AUG-2011 (Rel. 109, Last updated, Version 2)
XX
DE   Tobacco leaf curl PUSA alphasatellite, complete sequence.
XX
KW   .
XX
OS   Tobacco leaf curl PUSA alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1379
RX   DOI; 10.1007/s11262-011-0631-7.
RX   PUBMED; 21667126.
RA   Singh M.K., Singh K., Haq Q.M., Mandal B., Varma A.;
RT   "Molecular characterization of Tobacco leaf curl Pusa virus, a new
RT   monopartite Begomovirus associated with tobacco leaf curl disease in
RT   India";
RL   Virus Genes 43(2):296-306(2011).
XX
RN   [2]
RP   1-1379
RA   Singh M., Mandal B., Varma A.;
RT   ;
RL   Submitted (21-AUG-2010) to the INSDC.
RL   Advanced Centre for Plant Virology, Indian Agricultural Research Institute,
RL   Pusa Road, New Delhi, New Delhi 110012, India
XX
DR   MD5; df2eb2cfd069c255b41d4a674c3d87f8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1379
FT                   /organism="Tobacco leaf curl PUSA alphasatellite"
FT                   /host="Nicotiana tabacum"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Pusa Bihar"
FT                   /isolation_source="leaf"
FT                   /collected_by="Manoj Kumar Singh"
FT                   /collection_date="2009"
FT                   /identified_by="Manoj Kumar Singh"
FT                   /clone="AlfaTb1"
FT                   /db_xref="taxon:905055"
FT   gene            80..1027
FT                   /gene="Rep"
FT   CDS             80..1027
FT                   /codon_start=1
FT                   /gene="Rep"
FT                   /product="Rep"
FT                   /note="replication associated protein"
FT                   /db_xref="GOA:E3VQ45"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:E3VQ45"
FT                   /protein_id="ADO20901.1"
FT                   /translation="MAAIKSNWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   KRRHLQGYLQLKGQRTLNQVKAIFGDLKPHLEKQRARKTDDARDYCMKEETRVSGPFEF
FT                   GEYCPAGSHKRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAHEIQISNLKSW
FT                   QLRLKTLLERDPDDRTIFWVYGPNGGEGKSTFARDLYRSGSWFYTRGGSADNVNYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISNDRVHVIPCIPCGVCLKHHGADVMCGEYIE"
XX
SQ   Sequence 1379 BP; 425 A; 254 C; 312 G; 388 T; 0 other;
     accccgcctc gagaccccga gctagagacc tgtccgtaca atatagttct ctctcttaaa        60
     tttctttctt ctgcgataga tggctgcaat taagtcaaat tggtggtgtt tcacggtgtt       120
     cttcctttct gctactgcac ctgacttggt gcctctcttc gagaacactc acgtgagtta       180
     tgcctgctgg caagaggagg agtctccgac gacgaaacgt cgccacctgc aaggctacct       240
     gcaattgaag ggtcagagga ccttgaacca ggtgaaggcc atatttgggg atttgaagcc       300
     ccatcttgag aaacagcgag ctcgtaagac agacgatgct cgcgattact gtatgaaaga       360
     ggaaactagg gtttccggcc cctttgaatt tggggaatac tgtcctgctg gttctcacaa       420
     acgccgacaa agggaactcg taattcgatc tccggtgaga atggctgagg aaaatccgtc       480
     cgtcttccga cgagttaaag caaagattgc tgaggaagaa ttccagaaga gcgcgcatga       540
     gattcaaatt tcaaatttga aatcttggca attgcgcctg aagacgctcc tcgaacggga       600
     cccagatgac cgcactattt tctgggttta cggacctaat ggtggggaag gaaaatccac       660
     ctttgccaga gacctataca gaagtgggtc ctggttctat acacgtggtg gctctgcaga       720
     taatgttaac taccagtaca taggatgttt aggcaataat attgtatttg atattcctcg       780
     tgataagaag gattatttac aatatagttt aatagagatg tttaaggata ggttaatagt       840
     tagtaataag tacgagcctc ttatggcccc attaattaat tgtattcatg ttgtagttat       900
     gtctaatttt ctccctgatt ttgagaagat tagtaatgat agggttcatg taattccttg       960
     tattccttgt ggtgtttgtc ttaaacacca tggtgctgat gtaatgtgtg gcgaatatat      1020
     tgaataaaaa aaattaatta aaacaatctc tcacatacaa actattcctt tgaaaaaatc      1080
     aggccccgca ggggcataga taaaataatt ttgcttcttg aaaacaagaa ggaatgaaat      1140
     gaaaataaga aataaaaaaa aatagtaata gatagatgtg ggacccacat atatattgaa      1200
     agaaaaataa aagtaaaaga aataaataaa tatcactgtt ccctttgcgg aaggacctaa      1260
     ttgtaaataa tgaaagtttt gggcaacgcg gtgtaattta aaaagactct agggtgtgcg      1320
     cgtgcaatta ttgaggtctc tcgcatataa ataacacgtc acgaggcggg tgtagtatt       1379
//