ID HQ162269; SV 1; circular; genomic DNA; STD; VRL; 2743 BP. XX AC HQ162269; XX DT 03-FEB-2011 (Rel. 107, Created) DT 03-FEB-2011 (Rel. 107, Last updated, Version 1) XX DE Tomato leaf curl Hainan virus isolate Vietnam/Hanoi/tomato/2010, complete DE genome. XX KW . XX OS Tomato leaf curl Hainan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2743 RA Ha C.V., Le H.V., Tran T.N.; RT "Identification of begomoviruses in Vietnam"; RL Unpublished. XX RN [2] RP 1-2743 RA Ha C.V., Le H.V., Tran T.N.; RT ; RL Submitted (19-AUG-2010) to the INSDC. RL Research Centre for Tropical Plant Diseases, Hanoi University of RL Agriculture, Trauqui - Gialam, Hanoi, Vietnam XX DR MD5; 28c4e9d2866b114f499d6b38d8b87dc9. XX FH Key Location/Qualifiers FH FT source 1..2743 FT /organism="Tomato leaf curl Hainan virus" FT /host="tomato" FT /isolate="Vietnam/Hanoi/tomato/2010" FT /mol_type="genomic DNA" FT /country="Viet Nam" FT /collection_date="2010" FT /note="sample 89" FT /db_xref="taxon:664980" FT gene 132..482 FT /gene="AV2" FT CDS 132..482 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:E9LZP2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E9LZP2" FT /protein_id="ADW24230.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLLRDL FT ISVIRAKDYVEASRRYSHFHSRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHV FT PKAQDVQNVQKP" FT gene 292..1065 FT /gene="AV1" FT CDS 292..1065 FT /codon_start=1 FT /gene="AV1" FT /product="CP protein" FT /db_xref="GOA:E9LZP3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:E9LZP3" FT /protein_id="ADW24229.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYASRAAAPTVLVTNKRRSW FT VNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTH FT RVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNE FT PSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1062..1466) FT /gene="AC3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="AC3" FT /product="REn protein" FT /db_xref="GOA:E9LZP4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E9LZP4" FT /protein_id="ADW24233.1" FT /translation="MDSRTGEAITAAQAESGVYIWTVKNPLYFKIISHDERPFLMNNDI FT ITIQVQFNYNLRKALGIHQCFLIFQIWTRLRPQTWRFLRVFRVQCMKYLDNLGVISINN FT VIRACDHVLWDVLEKTEYVTHSNIIKFNLY" FT gene complement(1207..1611) FT /gene="AC2" FT CDS complement(1207..1611) FT /codon_start=1 FT /gene="AC2" FT /product="TrAP protein" FT /db_xref="GOA:E9LZP5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E9LZP5" FT /protein_id="ADW24232.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRNAKKATRRRRVDLPCGCSYFIALG FT CHNHGFSHRGSYHCSSSREWRIYLDGQKSPIFQDNQPRRETISDEQRHHHNTSPIQLQP FT EESVGNTPMFSNIPNLDSFTSSDLAFLKSI" FT gene complement(1514..2599) FT /gene="AC1" FT CDS complement(1514..2599) FT /codon_start=1 FT /gene="AC1" FT /product="Rep protein" FT /db_xref="GOA:E9LZP6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E9LZP6" FT /protein_id="ADW24231.1" FT /translation="MAPPNKFRINAKKYFLTYPHCSLTKEEALSQLKNLETPVNKLFIR FT ICREFHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQAAKSSTDVKSYM FT DKDGDVLDHGLFQIDGRSARGGCQSANDAYAEAINSGSKTSALNILREKAPKDYVLQFH FT NLNNNLDRIFTPPMEVYVSPFSSSSFDRVPEELEEWAAENVVSAAARPLRPISIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLEEEKNSALKNWAIKNAIFVTLQGAL FT YSGSYQGATPQRQESNEETES" FT gene complement(2149..2442) FT /gene="AC4" FT CDS complement(2149..2442) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E9LZP7" FT /protein_id="ADW24234.1" FT /translation="MELLTCMFSSNSKGNSSVKTKDSSISHPQAGQHISIRTFRQLKAQ FT QMSSPIWTKTETCLIMDFSRSMEDRLEEVANLLTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2743 BP; 742 A; 543 C; 600 G; 858 T; 0 other; accggatggc cgcgattttt tttacatggt ccccaccact aacaaatgtc ctccacttag 60 aacgctccct caaagcctat ttaattcaaa tccattatat atacttggtc cccaagtact 120 cactttaaaa tatgtgggat cctttactga atgagtttcc cgaaaccgta cacggtttta 180 ggtgtatgtt agcgattaaa tatttgcaat tagtagaaaa tacatactct cctgatacat 240 tagggtacga tttgcttcgt gatttaattt cagttattcg tgctaaggac tatgtcgaag 300 cgtcccgcag atatagtcat ttccactccc gcatccaagg tgcgtcgccg gctgaatttc 360 gacagcccgt atgccagccg tgctgctgcc cccactgtcc tcgtcacaaa caaaaggagg 420 tcatgggtga atcggcccat gtaccgaaag cccaggatgt acagaatgta caaaagccct 480 gatgttcctc gaggatgtga aggcccatgt aaggttcagt cgtatgaaca gcgtcatgat 540 gtagcgcacg taggtaaagt catttgtgtg tcggatgtta ctcgtggtaa cgggttgact 600 catcgagtgg gaaagaggtt ttgtgttaag tctgtttatg ttttgggcaa gatatggatg 660 gacgagaaca ttaagaccaa gaatcacact aatactgtga tgtttttttt agttcgtgat 720 aggagaccat ttgggactcc acaggatttt ggtcaggtgt ttaacatgta tgataacgag 780 ccaagtacag ccacagtgaa gaacgataac agagatcgct ttcaagttct acggcgtttt 840 caggcgactg ttactggtgg tcagtatgca agtaaggagc aagcaatagt taggaagttt 900 atgaaggtga acaaccatgt gacgtataat catcaagaag ctgcgaagta tgacaatcac 960 acagagaatg ctcttttgtt gtatatggca tgtactcatg ctagtaatcc tgtgtatgct 1020 actttgaaaa tcagaatcta tttctatgat tctgttcaga attaataaag attgaatttt 1080 attatatttg aatgtgttac atattctgtc ttttctaata catcccataa tacatgatca 1140 catgctctaa ttacattgtt aatactaatt acacccaaat tatctaaata tttcatacat 1200 tgaaccctaa atactcttaa gaaacgccaa gtctgaggac gtaaacgagt ccagatttgg 1260 aatattagaa aacattggtg tattcccaac gctttcctca ggttgtaatt gaattggact 1320 tgtattgtga tgatgtcgtt gttcatcaga aatggtctct cgtcgtggct gattatcttg 1380 aaatataggg gatttttgac cgtccagata tatacgccac tctctgcttg agctgcagtg 1440 atagcttccc ctgtgcgaga atccatgatt gtgacagcct agtgcaatga agtatgaaca 1500 gccacaagga agatcaactc tccgtctcct cgttgctttc ttggcgttgc ggtgttgcac 1560 cttgatagga acctgagtag agtgcgcctt ggagggtgac gaagatcgca ttttttattg 1620 cccagttttt aagtgcgctg tttttctctt cctccaagaa ttctttatag cttgaattgg 1680 ggccgggatt gcagaggaag atagtgggaa ttcccccttt aatttgaacg ggttttccgt 1740 actttgtgtt gctttgccag tccctttggg cccccatgaa ttctttaaaa tgctttaggt 1800 agtgcggatc aacgtcatca atgacgttgt accaggcatc attattgtat accttcggac 1860 tcaaatcaag atgaccacac aaataattat gtggtcctaa tgacctagcc cacatcgtct 1920 ttcccgtccg actatcacct tcgataacta tacttatcgg tctcaaaggc cgcgcagcgg 1980 cactgacaac gttctctgca gcccactctt cgagttcttc tggaactcga tcaaacgaag 2040 aagaagaaaa aggcgaaaca taaacctcca ttggaggagt aaaaatccta tctaagttat 2100 tatttaaatt atgaaactgt aaaacataat ctttaggtgc tttttccctt agtatattga 2160 gggccgaagt tttggaccct gaattgattg cctcggcata tgcgtcgtta gcagattggc 2220 aacctcctct agccgatctt ccatcgatct ggaaaagtcc atgatcaagc acgtctccgt 2280 ctttgtccat ataggacttg acatctgttg agcttttagc tgcctgaatg ttcggatgga 2340 aatgtgctga cctgcttggg gatgtgagat cgaagaatct ttggttttta cactggaatt 2400 tcccttcgaa ttggatgaga acatgcaggt gaggagttcc atcttcgtgg aattctctgc 2460 agatgcggat aaatagttta tttactgggg tttctaggtt tttaagttgg gaaagtgctt 2520 cttctttagt gagagagcag tgtggatatg tgaggaaata ttttttggca tttattctga 2580 atttattagg aggagccatt gactggtcaa tcggtgtctc ttaaacttgg ctatgcaatt 2640 ggtgtctggt gtcttattta tatgtggaca ccaaatggca ttatcgtaat tcctaaaaga 2700 aattcaaaat tcaaattggt aaagcggcca tccgtataat att 2743 //