ID HQ158596; SV 1; linear; genomic RNA; STD; VRL; 4587 BP. XX AC HQ158596; XX DT 24-NOV-2010 (Rel. 106, Created) DT 24-NOV-2010 (Rel. 106, Last updated, Version 1) XX DE Tuber aestivum virus 1 capsid protein and RNA polymerase genes, complete DE cds. XX KW . XX OS Tuber aestivum virus 1 OC Viruses; Riboviria; Totiviridae; Totivirus. XX RN [1] RP 1-4587 RX DOI; 10.1007/s00705-010-0824-8. RX PUBMED; 20890714. RA Stielow B., Menzel W.; RT "Complete nucleotide sequence of TaV1, a novel totivirus isolated from a RT black truffle ascocarp (Tuber aestivum Vittad.)"; RL Arch. Virol. 155(12):2075-2078(2010). XX RN [2] RP 1-4587 RA Menzel W., Stielow B.; RT ; RL Submitted (18-AUG-2010) to the INSDC. RL DSMZ-German Collection of Microorganisms and Cell Cultures GmbH, RL Inhoffenstrasse 7 B, Braunschweig 38124, Germany XX DR MD5; edee8b328ce53fcb28cf021a62383125. DR EuropePMC; PMC4300635; 25378500. DR EuropePMC; PMC5053509; 27711183. DR EuropePMC; PMC5666360; 29019944. XX FH Key Location/Qualifiers FH FT source 1..4587 FT /organism="Tuber aestivum virus 1" FT /host="Tuber aestivum" FT /isolate="Buekk" FT /mol_type="genomic RNA" FT /country="Hungary" FT /collection_date="2009" FT /db_xref="taxon:927810" FT CDS 31..2076 FT /codon_start=1 FT /product="capsid protein" FT /db_xref="InterPro:IPR015302" FT /db_xref="InterPro:IPR036332" FT /db_xref="UniProtKB/TrEMBL:E5KIN6" FT /protein_id="ADQ54105.1" FT /translation="MYKTFNSLSENAPVSTFETIQSRGTTSLMTRLRLNLAYDNLDFNR FT VYSSKQDYTWLGKAAAFIVEAELSLDGIAKQYLTLDGAINFDNVLAELRTGAGLQTTNV FT SNHSVSVSSWRWYDNHVTLLFNLLRLYVMADLQLKGPITTGSYPKYDDGHVEIDLNAGL FT PLPDETIVWSWPGSKNSLNYPEWGNFTEYMPLNDEAYIDVGGLLPEEVKMVLMATGAWE FT RQTNFKLDFPTPKLAERIYYRYPSKVTMIDDWLDGEIPDINFGLPNPKVVWNAIRKYVT FT TNNLYNQFYSAAAIINQVMLTPLPDSAEGMSWLIHEAQVVLPKFGSVRGRYPFLLRGEG FT ALIQAKALEDWTMLQTNPNLLFSTSMVTASLFNIGLAVRDSMLRGIANDSLSGVDTSLF FT QQPELAWAAAVSLACGIDVPLNGMSNCYVYYPTLADSNVRLALPALIKTPRGYWIEGDS FT IVIDGVPFVGSPYVLYPLAVYDFANPYSGAFALPKPIRRTRKGAVFTVIGAWMYSWVAR FT LAGYDVHISVNGSNVDYYKYFASNENSWVHPLWNGISDEIEGVFVHAIVRRNKHFLDIP FT DYTIPGNLTDVSVSVKILDRYVSDSSLTTKFRANYNVGSVTVPKSGIQVVTSGDLRKFW FT GYVRRSQPGLTMVGMAQPAIMPQPKHQLVEIDQEPEVTSEMVNMIE" FT CDS 2169..4556 FT /codon_start=1 FT /product="RNA polymerase" FT /db_xref="GOA:E5KIN7" FT /db_xref="InterPro:IPR001795" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:E5KIN7" FT /protein_id="ADQ54106.1" FT /translation="MCAVSRHSSTHMLVDVIPCSQLGLGAVYYHTEVAVRVYGEARYCR FT LFRLDDVYGCYMRTDAYTPCLGPVTKRLMSQVYSLVNSVCFNSCDISDYLSLTLGSTLQ FT MPKIEWPVKHGIYERSKITATHHTHLRPQELEAVAEGMGGRTKFVYAVCLQRLLSIGVV FT TEAVYSSFLAYIIGVEYNFALLLLRSTTVWSGTRGEEQLLSKLKSFASAIKASHSAKYQ FT PLTQLFELTVLLNRGIGSVDWAGEKENRVNPNTVDLDPADVYKSSMTIFRKARKSGYKY FT PKMHYDKFIESRWEWIPGGSVHSQYVDDDEYIYPGLYTRNKFITVNKMPSHHLQLFLSS FT TPQIKAWTSTKYEWGKQRAIYGTDLRSTIITNFAMYRCEEVLLHLFPVGDQADVEKVHR FT RISMMLDGYDSFCFDYDDFNSQHSLSSMQAVLLAYMDAFSDVMSPEQLQAMEWVILSVA FT DMQALSPTDNEWYRLTGTLLSGWRLTTFMNTVLNWVYMDVAGVFNIDGVHDSVHNGDDV FT MISISSIKAANLVMNKMHKVNARAQPTKCNVLSISEFLRIEHGMSGYDGLGAQYLSRSC FT ATLVHSRVESKEPITATRLVEADLSRLKDYRSRCANVDAVDLIQQQLFCRTAKLFNIEL FT GNIYKISELHRVVGGCSDRRWAPIEQQVTTTSGKYEIPHEIDDPSFWPGVNDYSAMLYR FT KIGEQVKMSVIVDAVSQGSRLTIAKSRSVTLAVERTANIKAKEWERALYRTYKGSTVHY FT YANLAKFLNVPPLFGIETRGGASAISAALASSDTMRALKVLL" XX SQ Sequence 4587 BP; 1356 A; 847 C; 1099 G; 1285 T; 0 other; gaatttaatt taattcaccg ataatcccca atgtataaga cttttaactc tctcagtgaa 60 aacgccccgg tttcaacctt tgaaaccatt caatcaagag gtactacctc gttgatgact 120 agacttagac tcaacttggc ttacgacaac ttagacttca atagagtcta cagtagtaag 180 caagactaca cctggctcgg taaagctgcg gcattcatcg tcgaggcaga gctgtcatta 240 gacggtattg ccaaacagta tttaacttta gatggtgcca tcaattttga caacgtttta 300 gctgaattac ggactggtgc aggtttgcag actactaatg tttcgaacca ttcagtctcg 360 gtatcatctt ggagatggta cgataatcac gtaactttat tgtttaattt gttacgtttg 420 tatgttatgg cagacctcca gctgaaaggt ccgatcacta cagggtcgta tcctaagtat 480 gacgacggtc atgttgaaat cgacttgaac gcagggttac cactcccgga tgaaacgatt 540 gtctggagtt ggcctggatc taagaattca ttgaactacc ctgaatgggg caacttcact 600 gaatatatgc cattaaacga tgaggcatac attgatgtag gaggtttgtt acctgaagaa 660 gtcaagatgg tgttaatggc taccggagct tgggaacgtc agactaattt taagctagac 720 ttccctactc cgaaattagc cgagcgtatt tattaccgtt atccgtcgaa ggttactatg 780 attgatgatt ggttggatgg cgagatacct gacattaact tcggattacc taaccctaag 840 gttgtgtgga atgcgatccg taagtatgtt actaccaaca atttgtataa ccagttttat 900 tcggcagccg cgattattaa tcaagtgatg ttgactccgt tacctgattc agctgaaggt 960 atgtcttggt tgatccatga agctcaggta gtacttccta agttcggatc agttagaggt 1020 agataccctt ttttgttacg tggagaaggt gcgcttattc aagcgaaagc cttggaagat 1080 tggactatgt tacaaactaa ccccaattta ttattttcaa ctagcatggt tactgcatct 1140 ttatttaata tcgggttagc cgtaagggat tcaatgctgc gcgggatagc aaatgattct 1200 ttatcgggag ttgataccag cttattccaa caaccagaac tggcatgggc agccgcagtg 1260 tctctcgcgt gtggaattga tgtccctttg aacggaatga gtaactgcta tgtatattac 1320 ccaacattag ctgactctaa tgtgaggtta gcgttaccgg cgttaatcaa gactcctaga 1380 ggttactgga ttgaaggaga tagtatcgtg attgacggtg tcccattcgt tgggtcacca 1440 tatgtgttat atccgttagc agtgtacgat tttgcaaatc cttattctgg tgcctttgcg 1500 ctcccgaaac ctattaggcg tactagaaaa ggagctgtgt ttacagtaat cggtgcctgg 1560 atgtacagtt gggtagctag actagcaggt tatgatgtcc acatttcagt taatggcagc 1620 aatgtagatt attataagta tttcgcgtcg aatgagaaca gttgggtaca tccattgtgg 1680 aacggtattt ctgatgaaat agaaggagta ttcgttcacg cgatagtccg ccgtaacaaa 1740 cactttttag acataccaga ttacactatt ccagggaatt tgactgacgt cagtgtttcc 1800 gttaaaatat tagataggta tgtgtctgac tcaagcttaa caactaagtt cagggcgaac 1860 tacaatgtag gatcagtcac tgtacctaaa agtgggattc aagtagttac tagtggagat 1920 ttaagaaagt tctggggtta tgtccgtaga tcacagccgg gtttaacgat ggtaggcatg 1980 gctcaaccag cgatcatgcc gcaaccaaaa caccagctgg tagaaataga tcaggaaccc 2040 gaagtaacat cagagatggt caatatgata gaataagctt gtatgaatgt gaacacggtg 2100 ccaaaccgag aagatactta agttaccagc ctaacagctt accgacgtgg gtgtcgttta 2160 agaatcgcat gtgcgcggta tctaggcatt catcaactca tatgttagta gatgtgatac 2220 cttgctctca gttaggctta ggggcagtat actaccacac tgaagtggcg gtacgagtat 2280 atggggaggc gaggtattgt agattgttta gactagatga cgtctacggt tgttatatga 2340 gaactgatgc atatacgcct tgcttagggc cagtgactaa acgactgatg tctcaagttt 2400 acagtttggt gaatagcgtg tgttttaata gttgcgacat atctgattat ttgtcattga 2460 cgttagggtc tactttacaa atgcctaaaa tagaatggcc ggttaagcac gggatctacg 2520 aaaggtcaaa gatcacggcc acacatcata cacatttaag gcctcaagaa ctagaagctg 2580 tagctgaggg tatgggcggt agaactaagt tcgtatacgc ggtttgcttg cagcgtttac 2640 tgtcgatagg cgttgttaca gaagccgttt actcttcatt cttagcgtac atcataggag 2700 tagagtataa cttcgctcta ctattattac gtagtacgac agtgtggtca ggaacgaggg 2760 gggaagagca gttactatca aaattaaaat cattcgcgtc agctataaaa gcaagtcatt 2820 cagccaagta tcaaccctta actcagttgt ttgagctaac cgttttgcta aatagaggta 2880 taggttcagt tgattgggct ggcgaaaagg aaaatcgggt taatcctaat accgtagact 2940 tagacccggc ggatgtgtat aagtcatcaa tgacaatatt tcggaaggcc agaaagtcag 3000 ggtacaaata tcctaagatg cactacgata aattcataga gtcaagatgg gaatggatac 3060 ctggagggag cgtgcattca caatatgtag atgatgacga atatatttac ccaggtttat 3120 atactaggaa taaatttatt acagtaaaca agatgccttc acatcacttg caactgtttt 3180 tgagttcaac gccacagatt aaggcttgga catcaactaa gtacgaatgg ggcaagcaga 3240 gagctatata cggtacagat ttgaggagta ctataattac gaactttgca atgtacagat 3300 gtgaagaagt gttgctgcac ttgttccctg ttggtgatca agcagacgtg gaaaaagttc 3360 acaggcggat atctatgatg ctagacggtt acgacagctt ctgcttcgat tatgatgact 3420 tcaactctca acattcatta agcagtatgc aagcagtttt actggcgtat atggatgctt 3480 tctcagacgt aatgagccca gaacagctac aagctatgga atgggtgata ctatcagtag 3540 cggacatgca ggccttgtca cccaccgaca atgagtggta taggctaacc ggtacgttat 3600 tgtcgggatg gcgtcttacc acattcatga acactgtatt gaattgggtg tacatggacg 3660 ttgcaggtgt gttcaatata gacggggttc atgattcggt gcacaacggt gacgacgtta 3720 tgataagtat atcaagcatt aaggcagcga acttggtcat gaataaaatg cataaggtta 3780 acgcaagggc acaaccaaca aagtgcaatg tattatcaat ttcggaattt ttaaggatag 3840 aacatggtat gtcagggtac gatgggctag gagcacaata tttgtcgcgt tcgtgcgcta 3900 cgctagtaca tagtagagta gaatctaaag agccaataac agcgacaaga ttagtggaag 3960 cggatttatc gcggcttaaa gattaccggt caagatgtgc gaacgtcgat gcagttgatc 4020 taatccagca acagttgttc tgcagaacag ccaagttgtt taatatcgaa ctagggaaca 4080 tatataaaat atctgaatta cacagagtag tgggcggttg tagtgaccgc aggtgggcgc 4140 ctattgaaca acaagtcact acaacaagcg ggaaatacga gatacctcat gaaatagacg 4200 atccgtcatt ttggccaggt gtcaacgatt attccgctat gctatatcgt aagataggtg 4260 agcaagttaa aatgtcggta atagtagacg cagtgagtca ggggtcaagg ttaactattg 4320 ccaagtctag gtccgtcaca ctagcagttg aacggacagc gaatataaag gccaaagagt 4380 gggaaagagc attgtatagg acttacaaag gaagtacagt acattattat gctaatttag 4440 caaaattttt gaatgtaccg ccattattcg gcattgagac tagaggcggg gcaagcgcaa 4500 tatcagccgc gcttgcaagc agtgatacta tgagagcact aaaagtgttg ttatagttag 4560 ctgctattga aggtagaaat accatat 4587 //