ID HQ141675; SV 1; circular; genomic DNA; STD; VRL; 2679 BP. XX AC HQ141675; XX DT 13-JAN-2011 (Rel. 107, Created) DT 05-MAY-2011 (Rel. 108, Last updated, Version 2) XX DE Rhynchosia yellow mosaic India virus segment DNA-B, complete sequence. XX KW . XX OS Rhynchosia yellow mosaic India virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-2679 RX DOI; 10.1007/s11262-011-0580-1. RX PUBMED; 21318241. RA Jyothsna P., Rawat R., Malathi V.G.; RT "Molecular characterization of a new begomovirus infecting a leguminous RT weed Rhynchosia minima in India"; RL Virus Genes 42(3):407-414(2011). XX RN [2] RP 1-2679 RA Jyothsna P., Malathi V.G.; RT ; RL Submitted (13-AUG-2010) to the INSDC. RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute, RL Pusa Campus, New Delhi, Delhi 110012, India XX DR MD5; 6694336ddd0750017c6fc0bda0af3e5c. XX FH Key Location/Qualifiers FH FT source 1..2679 FT /organism="Rhynchosia yellow mosaic India virus" FT /segment="DNA-B" FT /host="Rhynchosia" FT /mol_type="genomic DNA" FT /country="India:Thiruvananthapuram" FT /collection_date="27-Oct-2009" FT /clone="JRX5" FT /db_xref="taxon:935473" FT gene 386..1192 FT /gene="BV1" FT CDS 386..1192 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:E7D6V3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:E7D6V3" FT /protein_id="ADT70821.1" FT /translation="MCENTYCYNIMKMLSTNTPSNNWRSPFRRNTNYRRGGRIMNTPSR FT FKIRVARRLSYGKVERPLQFGKLCEKQHGIHMSLSSNRDITSFISYPPLSLNGDGRSRD FT YIKLLSLTISGMISARVVSGDQPMDNDIYRRGMFVISLILDRKPYIAEGSNELPSFEEL FT FGQYSESYVNMRLLSSRQDRFRLLGTIKKNINCDSGAADVNVGKYIRFVQGRRTLWSRF FT KDPDPMESGGNYRNIATNAILVNYAFISMQHITVNPLVQFELNYVG" FT gene complement(1215..2174) FT /gene="BC1" FT CDS complement(1215..2174) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:E7D6V4" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:E7D6V4" FT /protein_id="ADT70822.1" FT /translation="MIIMDGISYAGFVPHRNCYLITMENYTGVVATSNYIESKRCEYKL FT TNDDTEIALQFPTFLEQKMVKLMGKCMKIDHVVIEYRNQVPFNATGTVVVTILDKRLCD FT DEAAQAAFTFPIGCNVDLHYFSSSFFSVKDTSPWQLVYKVEDSNVIQDTMFAQIMARLK FT LSTAKHSTDIRFKPPRVKILSKDFTPECVDFWSVGRPKPIRRLLNPNPIGRHDGPINRP FT ILLQPGETWATKSQISRSASMRYSPNCNLGIELKPSSSEAEFPLKHLHQLPEASLDPGD FT SVSQTNNSSISRKEIEEIIESTVNKYLVSQKSNVNKKL" XX SQ Sequence 2679 BP; 799 A; 461 C; 521 G; 898 T; 0 other; acctgaggac ccgcgccggt gtcccgtctc taagaagtgg tcccacaggt gtcgtggcat 60 tatgtggtga cagcctgaag gttatactaa tgcatccgca atttatggcg cttaaaaagg 120 cgccccatgt gcgtatccgc ctttaatttg aattgtcctt caaatatttt ccgaaaataa 180 ccttggagta cacaaacgac aaattaatgc gaaggcaatt gtgtgcaata tttttaaatt 240 gtaaggggta ttaacgatat tgcacgatat ttgtttaccg gtaacgttga tattcggtta 300 aatatctaac atatcttgtc gtttgatggc agcttatata acattttaaa ttttattata 360 taacaatcat cagattgtaa gttatatgtg tgaaaacact tattgttaca acataatgaa 420 aatgttatct acaaatactc ctagcaacaa ttggcgatct ccctttcgtc gcaacactaa 480 ttatcgtcga ggtggtcgta ttatgaacac accatccagg tttaaaatac gggttgctag 540 gagattgtct tatggtaagg ttgaacgacc actccaattt ggaaaattat gtgaaaaaca 600 acatggtatc catatgtctc tttctagtaa tcgtgatatc acgtcattta ttagttatcc 660 tccattaagc ttgaatggtg atggtcgttc aagggattat attaaattat taagtttaac 720 tatttccgga atgataagtg caagggttgt atctggagat caacctatgg ataatgacat 780 ttatcgccgc ggaatgttcg tcatttcgtt gattttagat cgcaaacctt atattgctga 840 aggttcaaat gaactgccgt catttgaaga attatttggt cagtattcag agagttatgt 900 caatatgcga ctgttgtcta gtcgccaaga tcgtttccgt ttgttaggaa cgattaaaaa 960 aaatattaat tgcgactctg gagcggcaga tgttaatgtg ggcaaataca ttcgatttgt 1020 tcaaggtcgt cggacattat ggtcaagatt caaggaccct gaccctatgg aatctggagg 1080 caattaccga aatattgcaa ctaatgctat attagttaat tatgcattta tttcaatgca 1140 acatattaca gtcaatccgc ttgtacaatt tgagttgaac tatgttggat aattagaatg 1200 atgaataaaa taatttataa ttttttattg acatttgatt tttgtgatac aagatatttg 1260 tttacagtag attcaataat ttcctcaatt tcctttctac taattgagga attattagtt 1320 tgtgatacag aatcacctgg gtctaatgat gcttccggta gttgatgtaa atgttttagt 1380 gggaactccg cttcagatga actaggtttt agttcaatgc ctaagttgca atttgggcta 1440 tagcgcatag atgcgcttct tgatatttga gatttagtgg cccaagtttc acctggttgt 1500 aataatatgg gcctgttaat tgggccatcg tgcctaccaa tgggattggg atttaataat 1560 cgtctaatgg gcttcggtcg tccaacagac caaaaatcaa cgcattcagg tgtgaaatcc 1620 tttgatagga ttttcactct tggcggtttg aaccgaatat ccgtcgaatg tttcgcggtt 1680 gataatttta gtctggccat aatttgtgca aacatcgtat cctgtattac atttgagtct 1740 tctaccttgt agactaattg ccacggagat gtatctttaa ctgaaaaaaa tgaagaggag 1800 aaataatgta gatcaacatt acaaccaatg ggaaatgtga atgcagcttg tgctgcctcg 1860 tcgtcgcaaa gtctcttgtc taaaatggtc acaaccacgg tgcctgtggc gttaaatgga 1920 acttggttcc tatactcgat cacaacgtga tcaattttca tgcatttgcc cattagtttg 1980 accattttct gttccaggaa agttggaaat tgaagagcaa tttcggtatc atcatttgtc 2040 aatttgtatt cgcatcgctt tgattcaata tagttgcttg tcgcaacaac tcccgtgtaa 2100 ttttccatgg ttattaaata acaattgcga tgcggtacaa aacctgcgta agaaattcca 2160 tccattataa tcatattatt ctttatccgg ccgcgcaagc ggcattattt taaaatattg 2220 ttagcatcaa caacaaattg acccagaatg tgaaaacgtt ataactttat gcgtaatttg 2280 taaaaattac gagccattgc gaaagaaaat tgctgaggaa aataatattt tataaaaata 2340 gttgacaaga atatgcatac cttattgctg gaaatattaa aactcgtata tgttaacgct 2400 ttcctaatat tatatttata gaggaatgaa aacaacaata accgttaata tttgtttatg 2460 tgcgctattt atatatagta tttaagtgac ggcgtgtgtg gtttcattca caccaatgac 2520 tcttaaacga gagcgtctct ctctagaatt gatatgcgat agtttctctc tctagcgaat 2580 cggtgtacac cgattgcctt atagcgcatg ttattggtgt attggagtcc catatataga 2640 gtcccctata accctgacac gggtcctcag tataatatt 2679 //