ID HQ113104; SV 1; circular; genomic DNA; STD; VRL; 2797 BP. XX AC HQ113104; XX DT 29-DEC-2010 (Rel. 107, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 3) XX DE Bromus catharticus striate mosaic virus isolate AU QL 99, complete genome. XX KW . XX OS Bromus catharticus striate mosaic virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2797 RX DOI; 10.1007/s00705-010-0872-0. RX PUBMED; 21153747. RA Hadfield J., Martin D.P., Stainton D., Kraberger S., Owor B.E., RA Shepherd D.N., Lakay F., Markham P.G., Greber R.S., Briddon R.W., RA Varsani A.; RT "Bromus catharticus striate mosaic virus: a new mastrevirus infecting RT Bromus catharticus from Australia"; RL Arch. Virol. 156(2):335-341(2011). XX RN [2] RP 1-2797 RA Varsani A., Hatfield J., Martin D.P., Stainton D., Kraberger S., Owor B.E., RA Shepherd D.N., Lakay F., Markham P.G., Greber R.S., Briddon R.W.; RT ; RL Submitted (10-AUG-2010) to the INSDC. RL Electron Microscope Unit, University of Cape Town, Rondebosch, Cape Town, RL WP 7701, South Africa XX DR MD5; 15370ce1f73d2f42232cd9eadafe0dac. DR EuropePMC; PMC5622471; 28964254. XX FH Key Location/Qualifiers FH FT source 1..2797 FT /organism="Bromus catharticus striate mosaic virus" FT /host="Bromus catharticus" FT /isolate="AU QL 99" FT /mol_type="genomic DNA" FT /country="Australia" FT /collection_date="1999" FT /db_xref="taxon:936005" FT CDS 162..503 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:E7D4Y0" FT /db_xref="UniProtKB/TrEMBL:E7D4Y0" FT /protein_id="ADT91302.1" FT /translation="MAEYPQSAFVLSGAIPHQSKDEGFASSLKVTALSLFAAFIAAAIL FT CFLYKTCLADCYTQYRTTGLSSTSSSGFGRTSEASTAVPRTASEVSIPLGDRSATPSSC FT LPTSGISSI" FT CDS 510..1226 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:E7D4Y1" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:E7D4Y1" FT /protein_id="ADT91303.1" FT /translation="MTSSSKRKRGSGKTKTRKKARYTKWTSSRTTSAADSLQVQTFLWA FT EDQSFNTGGGCRLLTSFTRGSGENQRKSQETITYKVAVNLGISASTTVQKYCLTSHPIC FT WLVYDKTPGIADLTPTDIFDVPTGLNNWPSTWKVKREASHRFVVKRRWPFRLSVNGSTF FT SADYTKLPVPNTDNLCTINRFAKGLGVRTEWKDTVSADASDIKGGALYIVLAPANGLVF FT TARGVIKVYFKSVGNQ" FT CDS complement(join(1439..1831,1921..2616)) FT /codon_start=1 FT /product="Rep" FT /db_xref="GOA:E7D4Y2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7D4Y2" FT /protein_id="ADT91305.1" FT /translation="MASFVSETSDARGQTGAPRSPSGEVGAPGAVAACFEVRSRNIFLT FT YSKCHLDPVFMQEHLSSLLRRFEPTYVYVAREEHQDGSYHLHCLVQCKKYVRTKSAKFF FT DVEEFHPNVQNARMPHKVLAYIKKNPLCFVETGVFQASTKQKKKKVDAPSTKDAKMAEI FT IKSSTCKEDYLSMVRNTFPFDWATRLQQFQYSAESLFPSVPTPYMDPFGMPAQDEHPVI FT GAWLQAELFSRRPDERRRSLYICGPTRTGKTSWARSLGAHNYWQHSVDFLNLVANATYN FT VIDDIPFKFVPCWKGLVGCQFDITVNPKYGKRRMLKNGVPSIILVNEDEDWLKQMQPSQ FT VGWFETNCIIHYMYAGESFFEA" FT CDS complement(1705..2616) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:E7D4Y3" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7D4Y3" FT /protein_id="ADT91304.1" FT /translation="MASFVSETSDARGQTGAPRSPSGEVGAPGAVAACFEVRSRNIFLT FT YSKCHLDPVFMQEHLSSLLRRFEPTYVYVAREEHQDGSYHLHCLVQCKKYVRTKSAKFF FT DVEEFHPNVQNARMPHKVLAYIKKNPLCFVETGVFQASTKQKKKKVDAPSTKDAKMAEI FT IKSSTCKEDYLSMVRNTFPFDWATRLQQFQYSAESLFPSVPTPYMDPFGMPAQDEHPVI FT GAWLQAELFSVSPYAYSIHNGVTEDQARLDLQWMSDISRTDVLMNEEDHSTFADQQELE FT RLLGLEVWELTTTGNTASTSST" XX SQ Sequence 2797 BP; 653 A; 710 C; 674 G; 760 T; 0 other; taatattacc gcccatcttt agccgaggga ccatgcccaa ccggtcccga ggcgcccgga 60 ccccccaaac actaggggtt gcaccccgca atatgatttt cgaatctgac tgccatcttc 120 ctttgttttg tctttataag actagatcgc actagtacgc tatggcggag taccctcagt 180 ctgctttcgt tttatctggt gcgattccac atcaaagcaa ggacgaaggc tttgcctcgt 240 ctttgaaggt tactgctcta tctttgttcg cagcattcat tgctgctgcc atcttgtgtt 300 tcctatacaa gacttgtctt gcagattgct atacgcaata ccggactacc ggtctgagca 360 gtacatcttc atctggcttt ggtcgaacct ctgaggcttc gacagctgtc ccgcggacag 420 cgtctgaggt ttctattccc ttaggggata gatctgctac tccatcttcc tgtttaccta 480 catctggtat ttcatctatt tgatttgtca tgacgtcttc ctcgaagagg aaacgtggat 540 ctggtaagac gaagacgcgc aagaaggcgc gttacacgaa gtggacatca tcgagaacaa 600 cgtcagctgc agactctctg caggtacaga cgttcctgtg ggctgaggat cagtccttca 660 atactggtgg aggttgcaga ctgctaacct ccttcacgcg tggttcagga gagaaccaac 720 gcaaatccca ggagaccatt acgtacaagg ttgccgtcaa ccttggcatc tccgcctcca 780 ctaccgttca gaagtattgc ctgaccagcc atcctatatg ttggctggtc tacgataaga 840 cgcctgggat tgctgacctg actccaactg acatctttga tgtcccgact gggttgaaca 900 actggccttc aacctggaag gtcaagcgcg aagcatctca ccgcttcgtg gtgaaacggc 960 gctggccgtt tagactgtcc gtcaatggct ctacgttctc tgcagattat acgaagctgc 1020 cggtgcccaa tacagacaac ctgtgtacga tcaacaggtt cgccaaggga cttggagtgc 1080 gaaccgaatg gaaggacacg gtttctgctg acgcctccga catcaagggc ggagccctgt 1140 acatagtatt agccccggct aatgggcttg tattcacagc tagaggtgtc attaaagtgt 1200 acttcaagag tgtgggcaat cagtagccca atgtaatgag cccatagggc gatgaataaa 1260 atggcacatt ttattatgtc attatgacga acgagtacaa cgagaaaatt acataattgg 1320 tttttgtggg tcgcgagggg gaacccggag cacgcaccca aaaacactaa acacacaaac 1380 ccagaatatc tataggatac atggccggcg cgtgccgata gtcacgctgt agctggccct 1440 aagcttcgaa gaagctctcc cctgcataca tgtaatgtat gatacagttt gtctcaaacc 1500 agccaacctg actaggttgc atttgtttga gccagtcttc gtcctcgttc acgaggatta 1560 ttgatggaac tccattcttg agcatacgtc gtttaccata ttttggattt acggtaatgt 1620 caaactggca tccaacaagc cctttccaac aaggaacgaa cttgaatggt atgtcatcta 1680 tgacattgta agttgcgtta gcaactaagt tgaggaagtc gacgctgtgt tgccagtagt 1740 tgtgagctcc cagacttcta gcccaagaag tctttccagt tcttgttggt ccgcaaatgt 1800 agagtgatct tcttcgttca tcaggacgtc tgtcctgcta atatcagaca tccattggag 1860 gtcaagcctc gcttggtcct ccgttacgcc attatgtatg gaatatgcat aaggacttac 1920 agaaaataat tctgcttgga gccatgctcc aatcaccgga tgttcatcct gtgctggcat 1980 cccgaaggga tccatatatg gcgtaggaac cgaagggaat aagctctctg cggagtattg 2040 gaattgttgc aacctcgttg cccaatcgaa tgggaacgta ttcctgacca tcgagagata 2100 gtcctccttg caggtactgc tcttgattat ctccgccatt ttggcgtctt tagttgatgg 2160 agcatcaacc ttcttcttct tctgcttggt gcttgcttgg aaaacccccg tttctacgaa 2220 acataagggg ttttttttga tgtatgctaa caccttgtgt ggcattcttg cattctgcac 2280 gttaggatga aattcttcga cgtcgaagaa tttagcactc ttggtgcgaa catatttctt 2340 gcattgtacc agacaatgca aatggtaaga tccatcttga tgttcttctc ttgccacgta 2400 gacatacgtg ggttcgaacc ttcgaagaag gcttgagagg tgttcttgca tgaacaccgg 2460 atcaaggtgg cacttgctgt acgttaagaa aatgttcctt gatcttacct cgaagcatgc 2520 tgcgaccgcc cctggggcgc caacctcccc gctcggtgag cggggggcgc cagtttgccc 2580 cctggcgtct gatgtctcac tgacaaagga ggccatctcg tcagaggcta tcgtggatag 2640 actctcagcc cttggatgat ctttgagatc cgaggttttg aaaaactccc ttcctagacc 2700 cttgcccctt ggcgcccccc cccccgcgcc ctatcttata gggcctcggg tgggtggctt 2760 ttttctgggc cgggccggcg taaagatggg caagcaa 2797 //