ID   HQ012659; SV 1; linear; genomic RNA; STD; VRL; 1957 BP.
XX
AC   HQ012659;
XX
DT   18-OCT-2010 (Rel. 106, Created)
DT   16-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Raspberry latent virus segment S7, complete sequence.
XX
KW   .
XX
OS   Raspberry latent virus
OC   Viruses; Riboviria; Reoviridae; unclassified Reoviridae.
XX
RN   [1]
RP   1-1957
RX   DOI; 10.1016/j.virusres.2010.11.008.
RX   PUBMED; 21144872.
RA   Quito-Avila D.F., Jelkmann W., Tzanetakis I.E., Keller K., Martin R.R.;
RT   "Complete sequence and genetic characterization of Raspberry latent virus,
RT   a novel member of the family Reoviridae";
RL   Virus Res. 155(2):397-405(2011).
XX
RN   [2]
RP   1-1957
RA   Quito D.F., Martin R., Jelkmann W., Tzanetakis I., Keller K.;
RT   ;
RL   Submitted (03-AUG-2010) to the INSDC.
RL   Botany and Plant Pathology, Oregon State University, 3420 NW Orchard Av,
RL   Corvallis, OR 97330, USA
XX
DR   MD5; 68d68045c130e3e30c8352c4ee794639.
XX
CC   GenBank Accession Numbers HQ012653-HQ012662 represent the complete
CC   genome of Raspberry latent virus isolate RpLV9A.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1957
FT                   /organism="Raspberry latent virus"
FT                   /segment="S7"
FT                   /host="raspberry"
FT                   /isolate="RpLV9A"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="20-Oct-2007"
FT                   /identified_by="Diego Quito, Robert Martin, Wilhelm
FT                   Jelkmann"
FT                   /db_xref="taxon:907191"
FT   CDS             34..1890
FT                   /codon_start=1
FT                   /product="protein P7"
FT                   /db_xref="UniProtKB/TrEMBL:E3VL88"
FT                   /protein_id="ADO27693.1"
FT                   /translation="MALFNSREIINQYSPKSNTITYLMNMTEFHQYTGLVPDEQINFYV
FT                   IRTPADWLTVEDQPRTGITVMCQGNGTTSMLRALIRKAIFVVTTDALHEEYLVSLESIQ
FT                   VAGTSIRTLQVQDHDTLDFVIQSTINGYSLSQMLEVLNFKNYLISIGIRVEKLVDTAIP
FT                   LVSNGNGASQPTTEVAANGTPPPQQQVTTQSPIPLSSTPSESERQVNSSQQPLENFSSL
FT                   GQTSSDQRWAEMVLNDEENLDLVNQVMSQEEDTPTNILVDQPDNLNRLLEMRVTSGERE
FT                   TPVLEAVCGFNTNPSPDVNMQSVSCNDDSNPPTNMDAQAETQEQENDSDSSSSSSTGSD
FT                   DKDSSSSSSGASSSNFSIDPVSDIVKVPKDEFDVARWRIQSIFGEMTPFELSFEVESDD
FT                   EDILCEGAASSIKRDIFKNAALGSVTKVQRTEVSTSGKRKHYGVVRRGQCSKAAKIVMS
FT                   NVKLERDYGMDNRARSAFKNFSSSMVEMMDVYVQTGAHRTITKIDKILINSVKWYSRVI
FT                   LVIPCGMDALAKIWDKVLPGNVSMVCEETKTKMEACMWSLDPSGSRFKSQDSAAERMAF
FT                   TSEMRIIADHYSTPSAAVTGPFYLTQKDMWTRGILLTFCARG"
XX
SQ   Sequence 1957 BP; 592 A; 372 C; 484 G; 509 T; 0 other;
     agtttaattc cagtgcattt atcttacgtc aaaatggctc ttttcaattc tcgtgagatt        60
     atcaaccaat actctccaaa gtcaaacacc atcacctatc tcatgaacat gacagaattt       120
     catcagtata ccggactggt tcccgacgaa caaatcaact tctacgttat cagaacccct       180
     gcggactggc ttactgttga agaccaacct agaaccggta taacagttat gtgtcaaggg       240
     aatgggacga cttctatgct acgagcttta ataagaaagg caatttttgt tgtaacgacg       300
     gacgcattgc atgaagaata tctcgtcagc ttagaatcga ttcaggtagc gggaacgagc       360
     attcgtactt tgcaggtaca ggatcatgat actctggatt ttgtaattca atctaccatt       420
     aatggatatt ctttgtctca gatgttggag gtactgaatt tcaaaaacta tctgatcagc       480
     atcggaatac gggttgagaa attggtggat acggctattc ctcttgtgtc taatggaaat       540
     ggtgcttcac aaccaactac tgaagtggct gctaatggaa ctccaccgcc tcaacaacag       600
     gtgacaactc aaagcccgat tcctttatca tccaccccat ctgagtcgga aaggcaggtt       660
     aattcttctc aacaaccatt ggagaatttt agtagtttag gacaaacatc ttctgatcaa       720
     cgatgggctg aaatggtact gaatgatgaa gagaatttgg atctagtgaa ccaagtcatg       780
     agtcaggaag aggatactcc gactaacatc ctggtagacc aaccagataa cctgaataga       840
     ttgttggaga tgcgggtaac atcaggggaa cgagagacac cggttctgga agctgtatgc       900
     ggttttaaca ccaatccctc acctgatgtg aatatgcagt ctgtttcatg caatgatgat       960
     tctaatccac ccaccaacat ggatgctcaa gccgagaccc aggagcagga aaacgacagc      1020
     gattcttcta gctcatcatc aaccggaagc gatgataagg atagttcgag ttcaagcagc      1080
     ggcgcatcat cgtccaattt ctcgatagat ccagtcagcg atatcgtgaa agtgccgaaa      1140
     gatgagtttg atgtggctcg ttggcgtata caatcgatat ttggggagat gactccgttc      1200
     gagctgagct ttgaagttga aagtgatgat gaggatatac tgtgtgaagg agctgccagc      1260
     agtattaagc gggatatttt taagaacgct gctttaggaa gtgtgacaaa agtgcaaaga      1320
     actgaagtat caacatctgg aaagcgcaaa cattatggcg ttgtgcgaag gggacaatgt      1380
     tctaaggcgg ctaagatcgt gatgtcgaat gtgaaattgg agagggatta tgggatggat      1440
     aacagagcaa ggagtgcatt caagaacttc tcaagcagta tggttgaaat gatggacgtt      1500
     tatgtgcaaa ccggagccca tcggaccata actaaaattg ataaaatact aattaattcg      1560
     gtgaagtggt acagtcgcgt aatattagta ataccttgtg gaatggatgc attagcaaag      1620
     atatgggaca aggtactacc agggaacgtt tcgatggtgt gtgaggaaac aaagacgaag      1680
     atggaagctt gcatgtggtc gcttgatcct tcagggagta ggtttaagag tcaggattca      1740
     gctgcagaaa ggatggcttt tactagtgag atgagaatca ttgccgacca ctactctaca      1800
     ccatcagctg ctgtgacagg accattttac ttgacacaaa aggatatgtg gacacgtgga      1860
     atccttttaa ctttttgcgc gcgggggtaa tcgtatgact tggtgagtcg aggatgggcg      1920
     taaggtaggt gctgaaggca acggaattag cgaatac                               1957
//