ID   HQ012383; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   HQ012383;
XX
DT   16-JAN-2011 (Rel. 107, Created)
DT   25-JAN-2015 (Rel. 123, Last updated, Version 3)
XX
DE   Citrus tristeza virus isolate AMJ1 coat protein gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Ayazpour K., Sijam K., Vadamalai G., Jaafar H.;
RT   "Molecular characterization of Citrus tristeza virus strains in Peninsular
RT   Malaysia";
RL   Afr J Microbiol Res 5(18):2838-2846(2011).
XX
RN   [2]
RP   1-672
RA   Ayazpour K., Sijam K., Vadamalai G., Jaafar H.;
RT   ;
RL   Submitted (03-AUG-2010) to the INSDC.
RL   Department of Plant Protection, Faculty of Agriculture, University Putra
RL   Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia
XX
DR   MD5; 933d53f0bd24d078fef0c72530755255.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="x Citrofortunella microcarpa"
FT                   /isolate="AMJ1"
FT                   /mol_type="genomic RNA"
FT                   /country="Malaysia:Jengka"
FT                   /collection_date="Feb-2010"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:E7D2K5"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:E7D2K5"
FT                   /protein_id="ADV15574.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGKRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 198 A; 127 C; 169 G; 178 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga aggcgacgat        60
     gttgttgcag cagagtcttc tttcggttcc ttaaacttac acatcgatcc gactctgata       120
     gcgatgaacg atgtgcgtca gttgggtacc caacagaacg ccgctttgaa cagagatttg       180
     tttctcactt tgaaagggaa gtatcctaac ttgcctgaca aagataaaga ctttcacata       240
     gccatgatgt tatatcgttt agcagttaag agttcatcat tacaaagtga cgatgacacc       300
     acgggcataa cgtacactcg ggagggtgtt gaagtggatt tgtctgacaa actttggacc       360
     gacgtcgtgt ttaactctaa gggtattggt aaacgtacta acgcccttcg agtctggggt       420
     agaactaacg atgcccttta tttggctttt tgtagacaaa accgcaattt gagttatggt       480
     ggacgtccgc tagatgcagg aattccggcc ggatatcatt acctgtgtgc agatttcttg       540
     accggagctg gcttgactga tttagaatgt gctgtgtaca tacaagctaa agagcaattg       600
     ttgaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct tgggaaattc       660
     aacacacgtt ga                                                           672
//