ID   HQ012375; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   HQ012375;
XX
DT   16-JAN-2011 (Rel. 107, Created)
DT   25-JAN-2015 (Rel. 123, Last updated, Version 3)
XX
DE   Citrus tristeza virus isolate AMC2 coat protein gene, complete cds.
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Ayazpour K., Sijam K., Vadamalai G., Jaafar H.;
RT   "Molecular characterization of Citrus tristeza virus strains in Peninsular
RT   Malaysia";
RL   Afr J Microbiol Res 5(18):2838-2846(2011).
XX
RN   [2]
RP   1-672
RA   Ayazpour K., Sijam K., Vadamalai G., Jaafar H.;
RT   "Status of Citrus tristeza virus (CTV) in Peninsular Malaysia";
RL   Afr J Microbiol Res 5(7):838-843(2011).
XX
RN   [3]
RP   1-672
RA   Ayazpour K., Sijam K., Vadamalai G., Jaafar H.;
RT   ;
RL   Submitted (03-AUG-2010) to the INSDC.
RL   Department of Plant Protection, Faculty of Agriculture, University Putra
RL   Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia
XX
DR   MD5; f38b5878e88b995fd37bc80b200f8fd0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus x paradisi x Citrus trifoliata"
FT                   /isolate="AMC2"
FT                   /mol_type="genomic RNA"
FT                   /country="Malaysia:Cameron Highland"
FT                   /collection_date="Mar-2010"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:E7D2J7"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:E7D2J7"
FT                   /protein_id="ADV15566.1"
FT                   /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSLNLHIDPTLITMNDV
FT                   RQLSTQQNAALNRDLFLTLKGKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFSRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADDVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 193 A; 127 C; 174 G; 178 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aagaacaagg aaacgaaaga aggcgacaat        60
     gttgtcgcag cggagtcttc tttcggttcc ttaaacttac acatcgatcc gactctgata       120
     acgatgaacg atgtgcgtca gttgagtacc caacagaacg ccgctttgaa cagagatttg       180
     ttccttactt tgaaagggaa gtatcctaat ttgtctgata aagataagga ctttcactta       240
     gctatgatgt tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacacc       300
     acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa actttggact       360
     gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta acgcccttcg agtctggggt       420
     agaagtaacg atgcccttta tttagcgttt agtagacaga atcgcaattt gagttatggc       480
     ggacgtccgc tagacgcagg gattccggcc gggtatcatt acctgtgtgc agatttcttg       540
     accggagctg gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg       600
     ttgaagaagc gaggggctga tgatgtcgta gttaccaatg tcaggcagct tgggaaattc       660
     aacacacgtt ga                                                           672
//