ID   HM989937; SV 1; linear; genomic RNA; STD; VRL; 1317 BP.
XX
AC   HM989937;
XX
DT   15-MAR-2011 (Rel. 108, Created)
DT   28-JUN-2011 (Rel. 109, Last updated, Version 2)
XX
DE   Scophthalmus maximus reovirus segment S8, complete sequence.
XX
KW   .
XX
OS   Scophthalmus maximus reovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1317
RX   DOI; 10.1186/1471-2164-12-323.
RX   PUBMED; 21689389.
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   "Turbot reovirus (SMReV) genome encoding a FAST protein with a non-AUG
RT   start site";
RL   BMC Genomics 12(1):323-323(2011).
XX
RN   [2]
RP   1-1317
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   ;
RL   Submitted (26-JUL-2010) to the INSDC.
RL   State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of
RL   Hydrobiology, Chinese Academy of sciences, Donghu South Road #7, Wuhan,
RL   Hubei 430072, China
XX
DR   MD5; 6b25dadf00ddaad8e59ac72b9461604b.
XX
CC   GenBank Accession Numbers HM989930-HM989940 represent the complete
CC   genome of Scophthalmus maximus reovirus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1317
FT                   /organism="Scophthalmus maximus reovirus"
FT                   /segment="S8"
FT                   /host="Scophthalmus maximus (turbot)"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jun-2007"
FT                   /note="acronym: SMReV"
FT                   /db_xref="taxon:994485"
FT   CDS             13..1266
FT                   /codon_start=1
FT                   /product="VP6"
FT                   /note="core protein"
FT                   /db_xref="InterPro:IPR004317"
FT                   /db_xref="UniProtKB/TrEMBL:F2WJL4"
FT                   /protein_id="ADZ31984.1"
FT                   /translation="MARRTFVGFTPSFYGQPGPLFTDNDYLDLAGTTVRPWQNRITNIA
FT                   INSGGYPVGGGKYPTVASRQLILNALLGAHVSPYAAGAVNQFNGIAWRDAPLSSFVTIP
FT                   PAVAPAPPDPPIWVPAENVRLDSNQYPTYGLKFDAMWPQNQDLHMMTMWSLTDRGPIAM
FT                   LTFPSQNIPAMVATSMKSLIGASVAQIAIRAYRYSGQLPQEGVSIQAQVYQWLACILFG
FT                   SLTGRLHRGRTCEGFFFAYSKPAASQDDMILRWNDGPRARKPVNDVTVYVAAGSPHWQQ
FT                   SMLHVSFAMLAQSTSCLRPMATLIRNRNLPARSHNIAGLTGGGGALRDVERYNVPDLAL
FT                   QCHAAWLADGIIDAGALAAYDAATNAQFVNFMAHIVATEAANPLARGRIIVQPFAAGDD
FT                   VAPFETAQVIAGARRMFL"
XX
SQ   Sequence 1317 BP; 275 A; 403 C; 328 G; 311 T; 0 other;
     gttttatcat ctatggcgcg tcgcactttt gtagggttca ctccgagctt ttacggccaa        60
     cctggccctt tattcactga caacgattac cttgacctcg ctggtacgac cgtccgccca       120
     tggcagaacc gcatcacaaa cattgcgatt aactctggtg gttacccggt agggggagga       180
     aagtatccca cagtcgcctc acgccagctc atcctcaacg cgttgcttgg agctcacgta       240
     tccccttacg cagcaggagc tgttaaccag tttaatggca ttgcttggag agacgcaccc       300
     ctcagttcat tcgtcaccat accaccagcg gtcgcccccg cgcctccaga tcctccaata       360
     tgggtcccag ctgagaacgt acgtcttgac tcaaatcagt accctacata cgggctgaag       420
     tttgatgcta tgtggcctca aaaccaagac ctccacatga tgacgatgtg gtcactgact       480
     gatcgcggcc cgatagccat gctcaccttc ccctcccaaa acatcccagc aatggtcgcc       540
     acctccatga agtccctgat cggagcctcc gtggcccaaa tcgccattcg tgcctatcgc       600
     tacagtggtc agcttccaca ggaaggcgtg tctattcaag cccaagtcta ccaatggctt       660
     gcgtgcattc tcttcggctc cctaaccggc cggttgcatc gtgggcgcac ttgtgaaggt       720
     ttcttctttg cgtactcgaa acctgccgca agccaagatg acatgatcct tcggtggaat       780
     gatggaccaa gagcgagaaa acccgtcaat gacgtcaccg tctacgtcgc cgctggctca       840
     cctcactggc agcagtccat gttgcatgtc tcgttcgcta tgctcgcgca gtccacctcc       900
     tgtttgcgac cgatggcgac attgatacgc aatcgtaacc tcccagcgcg ctctcacaat       960
     atagccggac tgactggagg tggtggtgct ttgcgagatg tggaaagata caacgtgcct      1020
     gatctcgctt tgcagtgtca tgccgcgtgg ctcgctgacg gtatcattga cgctggagcg      1080
     ctggctgcgt acgatgctgc tactaacgct cagtttgtca acttcatggc gcacattgtc      1140
     gcgacggaag ctgccaatcc actagctcgt ggtcggatta ttgtgcaacc attcgcggct      1200
     ggagatgacg tggccccctt tgaaaccgct caggtgattg ccggagcgcg tcggatgttc      1260
     ctttaggtgc gtcccagggg gccaggacaa aacccccctg ccaagatgac attcatc         1317
//