ID   HM989936; SV 1; linear; genomic RNA; STD; VRL; 1399 BP.
XX
AC   HM989936;
XX
DT   15-MAR-2011 (Rel. 108, Created)
DT   28-JUN-2011 (Rel. 109, Last updated, Version 2)
XX
DE   Scophthalmus maximus reovirus segment S7, complete sequence.
XX
KW   .
XX
OS   Scophthalmus maximus reovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Aquareovirus.
XX
RN   [1]
RC   Publication Status: Online-Only
RP   1-1399
RX   DOI; 10.1186/1471-2164-12-323.
RX   PUBMED; 21689389.
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   "Turbot reovirus (SMReV) genome encoding a FAST protein with a non-AUG
RT   start site";
RL   BMC Genomics 12(1):323-323(2011).
XX
RN   [2]
RP   1-1399
RA   Ke F., He L.B., Pei C., Zhang Q.Y.;
RT   ;
RL   Submitted (26-JUL-2010) to the INSDC.
RL   State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of
RL   Hydrobiology, Chinese Academy of sciences, Donghu South Road #7, Wuhan,
RL   Hubei 430072, China
XX
DR   MD5; 1905f07faa17cf54a2243aeaa563d0d2.
DR   EuropePMC; PMC4284399; 25348270.
XX
CC   GenBank Accession Numbers HM989930-HM989940 represent the complete
CC   genome of Scophthalmus maximus reovirus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1399
FT                   /organism="Scophthalmus maximus reovirus"
FT                   /segment="S7"
FT                   /host="Scophthalmus maximus (turbot)"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="Jun-2007"
FT                   /note="acronym: SMReV"
FT                   /db_xref="taxon:994485"
FT   CDS             17..613
FT                   /codon_start=1
FT                   /product="NS22"
FT                   /note="FAST protein; non-AUG start site"
FT                   /db_xref="GOA:F2WJL2"
FT                   /db_xref="UniProtKB/TrEMBL:F2WJL2"
FT                   /protein_id="ADZ31982.1"
FT                   /translation="MGNTISSTFQYTVLQIDRSCCIKTSLTATSEATSWAIPPLAICCC
FT                   CCLCCTGGLYLVHSGRIPSISRRLDVLRDTRSASEYKVRSNRNPKSRVRRVSISDSSDS
FT                   SSLSDLELSRHRSHPLAHSFRPESYSQRPHSPSQAQSSIILPLVPVHSRTSLDDGVIRS
FT                   QPSRYQGPHQQFEDWLQQAHLLRPGDVSRDTNPFR"
FT   CDS             489..1325
FT                   /codon_start=1
FT                   /product="NS32"
FT                   /note="nonstructural protein"
FT                   /db_xref="UniProtKB/TrEMBL:F2WJL3"
FT                   /protein_id="ADZ31983.1"
FT                   /translation="MESFALNPHGIRDPTSNLRIGFNKHISYDLETYPEIPTPSVDFIP
FT                   ECVPSTDRYNGDPVPLIYDGRLTPVTGPHHLWEIDSHVEWQTWGNLRPFSPFSVWPPST
FT                   PNWTNRKAIHVFSSLSPYAYAAERSQNPLSYHFLNDQGRDWGRFWDLIWRCAQTRGARI
FT                   CHASTSFISSMLRLTEDQLSKLPAARDPIELLNAAGWDALALNALPPNLSRSLMRSPPN
FT                   PSVVVFECLTDWFDVMIRVPYDVQHPLGLGLNPCQFWTHPFVVLCYLRWRLLGGDD"
XX
SQ   Sequence 1399 BP; 280 A; 443 C; 324 G; 352 T; 0 other;
     gttttagtca atcatcctgg ggaacactat ctcaagcacc tttcagtaca cggtactgca        60
     gatcgacaga tcttgctgta tcaaaaccag tctcaccgcc acctccgaag ccacttcctg       120
     ggccattcct ccactcgcga tttgttgttg ctgttgcctc tgttgcaccg gcggtttata       180
     cctcgttcac tctggacgta ttccaagcat cagccgaagg ttggacgtgc tcagagatac       240
     ccggtcagcc tcagaataca aggtgcgtag caaccggaac ccaaagtcac gtgtacgtcg       300
     cgttagcatc agtgattcta gtgactctag tagtctctct gatctggagt tgtctcggca       360
     ccggtctcat cctttggcgc attcattcag gcctgagagc tatagccaac gccctcattc       420
     cccctcgcaa gcccagtcgt cgattatcct cccgctcgta cctgtccact cccgaacaag       480
     tctagacgat ggagtcattc gctctcaacc ctcacggtat cagggacccc accagcaatt       540
     tgaggattgg cttcaacaag cacatctcct acgacctgga gacgtatccc gagataccaa       600
     ccccttccgt tgactttatt ccggaatgcg tcccatccac cgatcgctac aatggtgatc       660
     ccgtccccct gatctacgat ggtcggttga ccccagttac cggtcctcat cacctatggg       720
     aaattgacag tcatgtcgag tggcagacct ggggcaatct ccgtccattc tccccattca       780
     gcgtgtggcc cccatccacc cctaactgga ccaacaggaa ggccatccac gtgttcagca       840
     gtctgtcacc gtatgcgtat gccgctgagc gcagccaaaa tccactgtcg tatcacttcc       900
     tgaacgatca gggtcgtgac tggggtcgct tctgggattt aatttggcga tgtgctcaga       960
     cccgtggcgc tcgtatctgc catgccagca cttcattcat ctcctccatg ctgcggctga      1020
     ctgaggacca gctctcaaaa ctcccagcgg ctcgggaccc aatcgaactg ctcaatgctg      1080
     ctggctggga cgctctggca ctaaacgccc taccacccaa tctgtcccgc tcactgatga      1140
     gatcccctcc aaacccctcc gtcgtcgtct ttgagtgtct gacggattgg tttgacgtca      1200
     tgattcgtgt tccatatgac gtccaacatc cgctcggtct cggtctcaac ccgtgccaat      1260
     tctggactca cccctttgtc gttctgtgct atctgcgctg gaggctgttg ggaggtgatg      1320
     actaggatgg cgaccgcgac agttgagacc ttggtctcgg ggatttagtc ccctgccgca      1380
     gtcgtgactg ttattcatc                                                   1399
//