ID HM989845; SV 1; circular; genomic DNA; STD; VRL; 2739 BP. XX AC HM989845; XX DT 13-JAN-2011 (Rel. 107, Created) DT 13-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Tomato leaf curl New Delhi virus-JLX10 segment DNA-A, complete sequence. XX KW . XX OS Tomato leaf curl New Delhi virus-JLX10 OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2739 RA Jyothsna P., Archana K., Malathi V.G.; RT "Complete nucleotide sequence of Tomato leaf curl New Delhi virus RT associated with yellow mosaic disease of Luffa acutangula, New Delhi"; RL Unpublished. XX RN [2] RP 1-2739 RA Jyothsna P., Archana K., Malathi V.G.; RT ; RL Submitted (25-JUL-2010) to the INSDC. RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute, RL Pusa Campus, New Delhi, Delhi 110012, India XX DR MD5; b6604c4285ae1427580cc74eafb89864. XX FH Key Location/Qualifiers FH FT source 1..2739 FT /organism="Tomato leaf curl New Delhi virus-JLX10" FT /segment="DNA-A" FT /host="Luffa acutangula" FT /mol_type="genomic DNA" FT /country="India:New Delhi" FT /collection_date="27-Apr-2010" FT /clone="JLX10" FT /db_xref="taxon:935286" FT gene 120..458 FT /gene="AV2" FT CDS 120..458 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:E7CZX4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E7CZX4" FT /protein_id="ADT70802.1" FT /translation="MWDPLLHEFPESVHGLRCMLAVKYLQEIEKNYSPNTVGYDLVRDL FT ILVLRAKNYGEATSRYHHFNARIEGTPTSQLRQPLWSSCSCPHCPRHKSKGLDQQANEQ FT KTQNVQNV" FT gene 280..1050 FT /gene="AV1" FT CDS 280..1050 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7CZX5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:E7CZX5" FT /protein_id="ADT70801.1" FT /translation="MAKRPADIIISTPASKVRRRLNFDSPYGARAVVPIARVTKAKAWT FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPTGSPQDFGEVFNMFDNEP FT STATVKNMHRDRYQVLRKWHATVTGGTYASKEQALVRKFVRVNNYVVYNQQEAGKYENH FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(310..795) FT /gene="AC5" FT CDS complement(310..795) FT /codon_start=1 FT /gene="AC5" FT /product="unknown" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:E7CZX6" FT /protein_id="ADT70807.1" FT /translation="MHVLHRCCARFIVKHVKNFPKILRGTCRTTVTDQKKHDTVSMVFC FT LDVFIHPYLPQHIDRFHTKSLPYAMCESSSSSNIANAHDFANMRDIVPRFKGLHLARAF FT TAPWHVGTSIHSVHSGFSVHWPVGPGLCFCDAGNGDNCTSSIGAVEVETSAYLRCGR" FT gene complement(1047..1457) FT /gene="AC3" FT CDS complement(1047..1457) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7CZX7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7CZX7" FT /protein_id="ADT70805.1" FT /translation="MITDSRTGEYITADRAESGVYTWEIRNPLYFKILKHDSRPFLTQH FT DIIKIQIQFNHNLRKALGLHKCFLTFKIWTGLRPQIGIFLRVFKTQVLKYLDMLGVIGI FT YNVIRAVYHVLDNVLDRTIDVWTSYDIKLDIY" FT gene complement(1177..1596) FT /gene="AC2" FT CDS complement(1177..1596) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /db_xref="GOA:E7CZX8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7CZX8" FT /protein_id="ADT70804.1" FT /translation="MQSSSHSRNHSIPVAKTSLPQKKKKSIRRRRVDLPCGCTYYISIN FT CHDHGFTHRGVHHCGSSREWRIYLGNSKSPVFQNFEARQQALPNTARHHQDSNTIQPQP FT AESPGTSQVFSNFQNLDGLTPSDWDFLESLQNPGP" FT gene complement(1499..2584) FT /gene="AC1" FT CDS complement(1499..2584) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiation protein" FT /db_xref="GOA:E7CZX9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7CZX9" FT /protein_id="ADT70803.1" FT /translation="MAPPRRFRIDAKNYFLTYPKCSLTKEEALSQLQTLETPTAKKFIK FT ICRELHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKAYI FT DKDGDVLEWGVFQIDGRSARGGQQTANDAYAKAINTGNKEDALKVLKELAPKDYVLQFH FT NLISNLDRIFQPRSEVYVSPFSISSFDRVPPELVDWASVNVVCAAARPFRPISIVIEGD FT SRTGKTMWARCLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVMIKGGIPTIFLCNKGPNSSYKEYLDEEKNAALKQWAVKNAVFITLEEPL FT YSGRENIAPTEEEEEHSQEAS" FT gene complement(2251..2427) FT /gene="AC4" FT CDS complement(2251..2427) FT /codon_start=1 FT /gene="AC4" FT /product="pathogenicity determinant" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7CZY0" FT /protein_id="ADT70806.1" FT /translation="MGLRISMFSSNSKGNSSAKITDSSTWFPQVGQHISIRTFRELNQR FT QMSKHTSTKTETF" XX SQ Sequence 2739 BP; 746 A; 598 C; 609 G; 786 T; 0 other; accgaatggc cgcgcaaatt tttaggtggg ccctcaacca atgaaattca cgctacatgg 60 cctatttagt gcgtggggac caataaatag acttgctgac caagtttgga tccacaaaca 120 tgtgggatcc attgttgcac gaatttccag aaagcgttca tggtttaagg tgcatgctag 180 ctgtaaaata tctccaagag atagaaaaga actattcccc taacacagtc ggctacgatc 240 ttgtccgaga tctcattctt gttctccgag caaagaacta tggcgaagcg accagcagat 300 atcatcattt caacgcccgc atcgaaggta cgccgacgtc tcaacttcga cagcccctat 360 ggagctcgtg cagttgtccc cattgcccgc gtcacaaaag caaaggcctg gaccaacagg 420 ccaatgaaca gaaaacccag aatgtacaga atgtatagaa gtcccgacgt gccaaggggc 480 tgtgaaggcc cttgcaaggt gcagtccttt gaatctaggc acgatgtctc tcatattggc 540 aaagtcatgt gcgttagcga tgttactcga ggaactggac tcacacatcg cgtagggaag 600 cgattttgtg tgaaatctgt ctatgtgctg gggaagatat ggatggatga aaacatcaag 660 acaaaaaacc atactaacag tgtcatgttt tttttggtcc gtgaccgtcg tcctacaggt 720 tcccctcaag attttgggga agtttttaac atgtttgaca atgaaccgag cacagcaacg 780 gtgaagaaca tgcatcgtga tcgttatcaa gtcttacgga agtggcatgc gactgtgacg 840 ggaggaacat atgcatctaa ggagcaagca ttagttagga agtttgttag ggttaataat 900 tatgttgttt ataatcaaca agaggccggc aagtatgaga atcatactga aaacgcatta 960 atgttgtata tggcctgtac tcacgcatca aatcctgtat atgctacgtt gaaaatccgg 1020 atctactttt atgattcggt cacaaattaa taaatatcca gttttatatc atacgaagtc 1080 catacatcaa ttgttcgatc taatacatta tccaatacat gataaactgc tcttattaca 1140 ttataaattc ctatgacacc taacatatcc aggtacttaa ggacctgggt tttgaagact 1200 ctcaagaaaa tcccaatctg agggcgtaag cccgtccaga ttttgaaagt tagaaaacac 1260 ttgtgaagtc ccagggcttt ccgcaggttg tggttgaatt gtatttgaat cttgatgatg 1320 tcgtgctgtg ttaggaaggg cctgctgtcg tgcttcaaaa ttttgaaata caggggattt 1380 cgaatttccc aggtatatac gccactctct gctcgatccg cagtgatgta ctcccctgtg 1440 cgtgaatccg tgatcatggc agttgatcga tatataatac gtacacccac acggcagatc 1500 aactcgcctc ctgcgaatgc tcttcttctt cttctgtggg agcgatgttt tcgcgaccgg 1560 aatagagtgg ttcctcgagt gtgatgaaga ctgcattctt gactgcccac tgcttcagtg 1620 ctgcattttt ctcttcgtcc agatattcct tatagctgct gtttggacct ttattgcaca 1680 ggaagatagt gggaattcca cctttaatca tgactggctt tccgtacttg gtgttgcttt 1740 gccagtcacg ctgggccccc atgaattctt taaagtgctt tagatagtgg ggatcaacgt 1800 catcaatgac gttgtaccag gcatcattgc tatacacctt tgggctcaga tcaagatgtc 1860 cacacaaata attgtggggt cctaagcatc gagcccacat tgttttgcct gttctactat 1920 ccccctcaat gactatgctt atgggcctaa aaggccgcgc agcggcacac acaacattga 1980 cactggccca atcgacaagt tctggaggaa ctctgtcgaa ggatgaaatt gaaaatggag 2040 aaacgtaaac ctcagaacga ggttggaaaa tgcgatccaa attgctaatt aaattatgaa 2100 actgcagaac ataatccttt ggcgctaatt cctttaatac tttcaatgca tcttctttat 2160 tccccgtgtt aatcgcttta gcatatgcat cattggccgt ctgttgacca ccacgagcag 2220 atcgtccatc gatctggaaa acaccccatt ctagaacgtc tccgtctttg tcgatgtatg 2280 ctttgacatc tgacgctgat ttagctccct gaatgttcgg atggaaatgt gctgaccgac 2340 ttggggaaac caagtcgaag aatctgttat ttttgcactg gaatttccct tcgaattgga 2400 tgagaacatg gatatgcgga gacccatcct cgtgaagctc tctacagatc ttgatgaatt 2460 tcttcgcagt tggggtttct agggtttgca attgggaaag tgcctcttct ttagttagag 2520 agcactttgg atatgtgagg aaatagtttt tggcatctat tctgaaacga cgtggcggag 2580 ccataaaact tgtcgttttg attcggcgtc cctcaacttc ctctatgtaa ttggcgtctg 2640 gcgtcccata tataggtagg acgctaaatg gcagaattgt aattttgaaa agaaaattac 2700 tttaattcaa aatcctcata gcggccattc gttaatatt 2739 //