ID HM859903; SV 1; circular; genomic DNA; STD; VRL; 2568 BP. XX AC HM859903; XX DT 22-MAY-2011 (Rel. 108, Created) DT 22-MAY-2011 (Rel. 108, Last updated, Version 1) XX DE Whitefly VEM 2 begomovirus, complete genome. XX KW . XX OS Whitefly VEM 2 begomovirus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2568 RX DOI; 10.1371/journal.pone.0019050. RX PUBMED; 21544196. RA Ng T.F., Duffy S., Polston J.E., Bixby E., Vallad G.E., Breitbart M.; RT "Exploring the diversity of plant DNA viruses and their satellites using RT vector-enabled metagenomics on whiteflies"; RL PLoS One 6(4):E19050-E19050(2011). XX RN [2] RP 1-2568 RA Ng F.F., Bixby E., Vallad G., Duffy S., Polston J.E., Breitbart M.; RT ; RL Submitted (25-JUL-2010) to the INSDC. RL University of South Florida, 140 7th Ave S, Saint Petersburg, FL 33701, USA XX DR MD5; c0e4d45afbfbf3c7e698847d28515728. XX FH Key Location/Qualifiers FH FT source 1..2568 FT /organism="Whitefly VEM 2 begomovirus" FT /host="whitefly/plant" FT /mol_type="genomic DNA" FT /country="USA:Florida, Homestead" FT /collection_date="Apr-2009" FT /note="acronym: WfVEM2BV" FT /db_xref="taxon:1032482" FT stem_loop join(2548..2568,1..13) FT /note="contains nonanucleotide sequence" FT gene 381..1151 FT /gene="NSP/BV1" FT CDS 381..1151 FT /codon_start=1 FT /gene="NSP/BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:F6KD55" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:F6KD55" FT /protein_id="AEF12639.1" FT /translation="MYTWRGKRGSIFNYRRFNARNSVFNRSTVVKRHDGKRRGGNYMKS FT TDEPNLSFQRIHENQFGPEFVMAHNSAISTFISYPNMGNIKPNRVRSYIKLKRLRFKGT FT VKIERVQSDLHMDGSIPKVEGVFSLVVVVDRKPHLGASGGLHSFDELFGARIHSHGNLN FT ITPSLKERYYIKHVFKRVVSVEKDTLMIDVEGSTTLSNRRFNCFANFKDFDRDPCKGVY FT DNISKNALLVYYCWMSDAVSKASSFVSFDLDYIG" FT gene complement(1203..2084) FT /gene="MP/BC1" FT CDS complement(1203..2084) FT /codon_start=1 FT /gene="MP/BC1" FT /product="movement protein" FT /db_xref="GOA:F6KD56" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:F6KD56" FT /protein_id="AEF12640.1" FT /translation="MDSQLAYPPSAFNYIESHRDEYQLCHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPVNATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLYTAKHSVDIPLRAPTVKILS FT KQFTDKDVDFSHVDYGKWERKPIRCASMSRIGSRGPIEIRPGESWASRSTIGMAQSEVD FT SEIENELHPYRHLSRLGTSVMDPGESASIVGAQRAESNITMSLGQLNELVRTTVQECIN FT SNCKASQPKTLQ" XX SQ Sequence 2568 BP; 673 A; 547 C; 555 G; 793 T; 0 other; accggatggc cgcgctttgg tgaccccccc cctgcccact cacgcgctct cccttggtgc 60 cgctctctca cgcgctctcc cattggtgtt ggtgttccac tctttaattg gtgctggtgc 120 cccactctcc cttttttgac tgccctttaa tttgaattaa aggttaatgc tttactcgcg 180 cgatttgacc aagtgtggaa ttattgtctc gcgacgacgt ggccaatgct cgaccatgct 240 gctgagtcta tttatccgat tagtaattaa ccttactatt taagtgtgac acttaaatgt 300 gatatccgac gtgactcagc tgtacaccac gtttatatcg ttatctctaa tcgtgtttta 360 cttggtctca ttctcaggtc atgtatacat ggaggggtaa acgtggttct atttttaatt 420 accgacgatt taacgcacgt aacagtgtat tcaaccgttc aaccgttgtg aaacgacatg 480 atggtaaacg acgtggaggt aattatatga agtcaactga tgaacccaat ttatcattcc 540 aacgcataca tgagaatcag tttgggcctg aatttgtaat ggcccataat tcagccatat 600 ccacgttcat cagttatcca aacatgggaa atatcaaacc taaccgagtc cgttcttata 660 ttaagttgaa acgactccgt ttcaaaggga ctgtgaaaat tgaacgggtt caatccgatt 720 tgcacatgga cgggtctatt cctaaagtgg aaggagtttt ctctcttgtt gtggttgtgg 780 atcggaaacc ccacttgggt gcatctggtg gtctacattc attcgacgag ctttttggtg 840 caaggatcca cagccatggt aacctcaata taacaccatc tctgaaggag cgttattata 900 tcaaacacgt gttcaaacgt gtggtgtctg tggagaagga tacgctcatg atcgacgtcg 960 agggatctac aactctctct aacaggcgtt ttaactgctt tgccaatttt aaagactttg 1020 accgtgatcc atgcaagggc gtatatgata atatcagcaa gaacgccttg ttagtttatt 1080 attgttggat gtcggatgct gtgtctaagg catcttcatt tgtatcattt gatctcgatt 1140 atatcggatg agtaatggaa aatacatttg acatacaagc attcaacaat aatagtcaat 1200 ctttattgca atgttttggg ctgagaagcc ttacaattac tattaataca ttcttggacc 1260 gttgtcctaa ctagctcgtt caattggccc aaagacattg taatgttgga ttccgctctc 1320 tgtgctccca caattgaagc agactctcct gggtccataa cgctggtccc aagcctactc 1380 aggtgcctgt atggatggag ttcattttct atctcagaat ccacttctga ttgggccatt 1440 cctatggtac tcctggaagc ccatgactca ccaggcctta tttcaattgg gcctctagac 1500 ccaattcttg acatggacgc gcatcttatg ggcttcctct cccatttccc atagtccaca 1560 tgcgaaaagt cgacatcttt gtctgtgaac tgttttgaca atattttcac tgtcggtgcc 1620 cggaggggga tatccactga gtgtttcgct gtgtacaatt tcagcttccc tttaaacttg 1680 gcgaagtggg ttctctggtg aacattagtg tctgaaactc tgtaatagag tttccatgga 1740 attgggtctt tgagcgagaa gaaggaagct gagaaatagt ggagatctat gttgcatctg 1800 atcggaaaag tccacgacgc ctgcaaagac tcattgtctg tcattctctt gtcatgaatc 1860 tccactatta ccgtcccagt tgcgttaact ggaacctgtt gcctatattc tatgacgcag 1920 tgatctatct tcatacagct acgactgagc ctcgccgtca actgggacgc tgtggacgga 1980 aattgcagga ttatctcagt taggtcatgg cagagctgat attcgtctct atgagactct 2040 atgtaattga aggcacttgg aggatatgct aactgagaat ccatctggaa aagaaaaggc 2100 cgcgcagcgg ctgtgcaatt taattatgaa ctggggaata aaaacctagg gtttttgaat 2160 atgaacaata tatgaactac tcattaactt gcaagaattt atgggaaacc cagtgatata 2220 aatgaggaat tggaggataa tcgcttaatt tttccataaa attaagaaca gtctttgtat 2280 cttcccataa attgaaagcg ttttgaaaaa tgggaggaat atgaagggta aagtgctctg 2340 tgtaatgagt tagatgtggt ttaggttata tagactctcc cattttttgg tagtcagtgg 2400 cattttggta aaaaataaga tgtcaccgat atagctctga gtgttcccca attgagcctc 2460 tctcaaactt gctcattcaa ttggggaaac ggggtacaat atatactaga accctcaata 2520 gaactttcaa tcgtgttcgc acacgtggcg gccatccgct ataatatt 2568 //