ID HM639780; SV 1; linear; viral cRNA; STD; VRL; 6822 BP. XX AC HM639780; XX DT 03-MAY-2012 (Rel. 112, Created) DT 03-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Oyo virus segment L RNA polymerase gene, complete cds. XX KW . XX OS Oyo virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus; OC unclassified Orthobunyavirus. XX RN [1] RP 1-6822 RA Palacios G., Savji N., Tesh R., Bussetti A.V., Lipkin W.; RT "Genetic Diversity of Orthobunyaviruses"; RL Unpublished. XX RN [2] RP 1-6822 RA Palacios G., Savji N., Tesh R., Bussetti A.V., Lipkin W.; RT ; RL Submitted (07-JUL-2010) to the INSDC. RL Center for Infection and Immunity, Columbia University, 722 West 168th RL Street, New York, NY 10032, USA XX DR MD5; e5a21756a90bfed22c30e27943b88222. DR EuropePMC; PMC4136290; 24850747. XX CC GenBank Accession Numbers HM639778-HM639780 represent sequences CC from the 3 segments of Oyo virus. XX FH Key Location/Qualifiers FH FT source 1..6822 FT /organism="Oyo virus" FT /segment="L" FT /mol_type="viral cRNA" FT /country="Nigeria" FT /collection_date="1964" FT /db_xref="taxon:1027632" FT CDS 35..6757 FT /codon_start=1 FT /product="RNA polymerase" FT /db_xref="GOA:I1STB8" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR029124" FT /db_xref="UniProtKB/TrEMBL:I1STB8" FT /protein_id="AEE01391.1" FT /translation="MDPSKVNQFRHRINAVKEATLARDILSDMYMARHEYFATEYCLSN FT NIEYRNDVRASEIYCTVYPDRSPFDIERIRYTPDNYVFLGDRLYIIDFKVSTDSDSSIE FT TYNKYINAFQEFFPDIEFEVVIVRCNPMSMQITINSDSFQQLFPNIPTNLSFHWFFELR FT RILLEKFRDNEEFQDMIDHGDFTLTAPWLDEDTEDLYTHPVYLEFIESLSSKHESLFQR FT SLNFDAYSSQTDKWNSNLIYLKEKTTETYNNYVHDMAQSIFETPDIDIPTKDKIIEGWN FT NMYMRIQNERELSKSPVDQKPSIHFIWGKPDKNKPTGNNEKIIRLSKSLQGIKDNTGYA FT NNFKSIGILSDFSSDVNKYENFCSVLKKEARSKAKPNSKGVEPIKIKNCTILWEQQFKY FT EIIDNDKYSRSNFYKNYLGIGKHKQFKDRTDIDLSRPKILDFEDMIIKLASKTMIQKAK FT SVLNDENILEHKGCFLDEYIENIKVCSVETFDFINKLTKTNFWSSINDFSILMKNMLSV FT SQYNKYNTFRIVTCANNNLFGIVFPSSNIRTKKSTIVFVTIVLHEDKSEILDAGALFNT FT YETSGGFISISKAIRLDKERCQRIISSPGLFILTAVLLKNDNKTIVDSDVMTFSYFTSL FT SITKAMLSLTEPARYMIMNSLALSSQVKEYIEEKFSPYTKTLFSVYMTELIKRGCMNAN FT SIREKINLRNIHMSDLEMTQKGVSDDKTLTGIWFPGEVSLKEYINQVYLPFYFNSKGLH FT EKHHVAIDLAKTVLEIEKDQRESLPSAWGVNFEKQTVNLDILIYSLAENLMLDTSRHKH FT LRHRVESRNNFKRSLTTISTFTSSKSCIKIGDFYEEKSKQNAKYLKDRNTEIKKYKVAN FT PLFDNEILEHEIKHSDYNDLIRAIPEYIDMKSTKVFDEMYVYIEKNPKNTIEEIMEVMK FT DHKTFYFTFFNKGQKTFKDREIFVGELQAKMCLYCIERISKERCKLNPEEMISEPGDGK FT LKKLEQKAEDEMRFIVENLQPVGKCDPNSLIEAVNKPKGSKFEINADMSKWSAQDVLFK FT YFWLFAMDPILYPNEKKRILYFLCNYMQKRLILPDEMMCSILDQKEVRQFDLIREMTEN FT YKRNYVIIKRNWLQGNLNYTSSYLHSCSMSVYKEVVKRATALLDGKVVVNSLVHSDDNQ FT TSVNFIQDKLSNDYLLSFVMKTFQKVCASFGNQVNMKKTYATNFIKEFVSLFNIYGEPY FT SVYGRFLLTCVGDCAYIGPYEDFASRLSATQTALKHGCPPSNAWLSIAMNSWMTYNTYN FT MLPGQANDPVKSLAMERKHIPIELGGLLNSELSTIALLGLESGNTTFLTSLLKRMSGVM FT IRRENVTKQVQDIKKWDISSLKKHELFYLKLLRYVYMDAIITNDSTVGETSEMRNRSLI FT TPRKFTTKGSLKRLKSYDDYKEICESSEKIEELFQYMIRNPELLVTKGETITEYKMTIL FT YRYNSKKFKESLSVQTPVQLMIEQILYSNKPTVDYNSISDKFYSIDDLELESDEIIGKY FT TISETLSKIVLDLEKLPLTNDDVATVYNFCICNDPLTLSIANSLILKVESSEVSRTGLV FT ATTMPEIRNLKLIQYSPAIVIRAYIHSNYDFKGIDEAELRRDVLHLSEFIDKTGLKDRM FT EKKIEDYYNSNDDESLMFRLRELTKFYQICYDYIKSTEHKVKVFILPTRTYTSQDFISV FT VMGNYLSDKSWSIVHFLKPLEGNNYKGQVAKDPMIELQIADECFRLLAHFTDYFIADYT FT KKQFLIKILSEFKFKDFKVSNLWQLLKQSEHRLKFLPILYIMDELTNRDLVKYDSYRTD FT ERITWNDWQLSQRLNIGRIDLVINGYNKRIAIYGEDNKLLEAILYIKRDTFDQIPSQSR FT KLLNARHNLLLEKMEPIKVLDSRSWYICYQKGRKNRYDYVVLNGYQINSRNKSIDDAAH FT RSKNYTVAVCPVGINTFTDTESVDIASVKNLNYEHTSCTKLKINEYETATIRRCNLSKM FT SFFDGPQIIAGSLNINNLIVSKSLLTLNYKSILKVDLLSILPIFNCNQTDQEIDFEFLS FT EEPVDVDEVMDLESQPVFSITVSKKSKGKITYKKAIEECIKINTEKFEDLFDFFEDGFY FT SSKNLGVIRTIVALIDELTTNEWSTKLKESIHLCMSTKGYDAMFHTFTLQDAFLLKDGV FT NKIINWEKIIIFLKKMPDIREEPWKEIFANFKTKAILNANEEMSKKSASLTLEDLAEEL FT AEAGGHSKYQFH" XX SQ Sequence 6822 BP; 2620 A; 1044 C; 1179 G; 1979 T; 0 other; tgatatatac ttaaacatca caactcttta aaccatggat ccttcaaaag tcaaccaatt 60 ccgacacaga atcaatgctg tgaaagaagc cactcttgca agagatatac tttcagatat 120 gtatatggca agacatgagt attttgctac agaatattgc ctttcaaaca atattgaata 180 caggaatgat gttagagctt cagaaatata ctgtacagtg tatcctgaca gatctccgtt 240 tgatattgag aggattagat acacccccga taactatgta tttttgggag ataggttata 300 cataatagat ttcaaagtgt caacagattc tgacagttct attgagactt ataacaaata 360 cataaatgca ttccaagaat ttttcccaga tattgaattt gaagttgtca tagtgaggtg 420 taatcctatg agtatgcaga tcacaatcaa ttctgatagt tttcagcaat tatttccgaa 480 tataccaaca aatctttcat tccattggtt ctttgaatta cgtcggatac tacttgaaaa 540 atttagagat aatgaagaat tccaagatat gatagaccat ggagatttta cattaactgc 600 accatggctg gatgaagata cagaagactt atatacccat ccagtttatt tagaattcat 660 tgaatcatta agctcaaaac atgaaagctt atttcaaagg tctttaaatt tcgatgctta 720 ttcaagccaa actgataagt ggaattccaa tctaatatat ctcaaagaga aaactactga 780 aacctacaat aattatgtac acgatatggc acaaagtatt tttgaaacac cagatataga 840 catcccgacc aaagacaaga taatagaagg ctggaataac atgtacatgc gaatacaaaa 900 tgagagagaa ttgtcaaaaa gccctgttga tcagaagccg tccatacatt ttatatgggg 960 gaaacctgac aaaaataaac caacaggtaa caatgaaaag ataattaggc tctcaaaatc 1020 gttacaagga attaaggaca acacaggtta tgcaaataat tttaagtcta taggcatatt 1080 gtcagatttt tcatcagatg taaacaaata tgaaaatttt tgctcagtat taaaaaagga 1140 agcacgatca aaggctaagc ctaatagcaa gggggtagaa cctataaaaa ttaagaattg 1200 caccatacta tgggaacaac aatttaaata tgaaatcatc gacaatgata agtattctag 1260 atctaatttt tataagaatt atttagggat tggcaaacat aaacaattta aagatagaac 1320 tgatatagac ttatctagac ctaaaatact agattttgaa gatatgataa taaaacttgc 1380 atccaaaact atgatccaaa aggccaaatc cgtgctgaat gatgaaaata tcttggagca 1440 taaaggctgt tttttagacg agtacattga gaacataaaa gtatgttctg tagaaacatt 1500 tgacttcatc aacaaattga ccaaaacaaa cttttggtca tcaataaatg atttttctat 1560 tcttatgaaa aatatgctct cagtatctca gtataataaa tataatactt tcagaattgt 1620 aacatgcgca aacaataatc tatttggaat tgtcttccct tcttcgaata taagaacaaa 1680 gaaatctact atcgtctttg tgacgatagt gctacatgaa gacaagtcag aaattttgga 1740 cgctggggca ttgtttaata catatgaaac aagtggagga ttcatctcta tatcaaaagc 1800 aattagactt gataaagaga gatgtcaaag aataatttca tctcctggtc tgtttatact 1860 aacagcagtg ctattgaaaa atgacaacaa gactatagtt gattcagatg ttatgacttt 1920 ctcatacttc acatctttgt caataactaa ggctatgcta agtctaacag aacctgctag 1980 atacatgatc atgaactcgt tagctttatc tagtcaagtc aaagaataca tagaagaaaa 2040 attttctcca tatacaaaaa ctttattttc tgtttatatg acagaattaa tcaaaagagg 2100 atgtatgaat gccaattcaa tacgagaaaa gattaatcta agaaatatcc atatgagtga 2160 tttagaaatg acacaaaaag gtgtttcaga tgataaaaca ttaacaggta tttggtttcc 2220 tggggaagtc tcattgaagg agtatatcaa tcaagtctat ttgccatttt atttcaattc 2280 aaaaggcttg catgaaaagc atcatgtggc aatagattta gccaaaacag tattagagat 2340 agaaaaggat caaagagaaa gcctaccatc tgcctggggc gttaactttg aaaagcagac 2400 agttaatcta gacatcctaa tttattcttt agctgagaat cttatgttag acacttctag 2460 acataaacat ttgagacatc gtgtggagtc tagaaacaat tttaaaaggt cactaactac 2520 tatttcaact ttcacaagta gcaaatcctg cattaaaata ggcgattttt atgaagaaaa 2580 atctaaacaa aatgcgaaat atttaaaaga tagaaacaca gaaattaaaa aatataaagt 2640 agcaaaccca ctgtttgaca atgagatact tgaacatgaa ataaaacatt ctgattataa 2700 cgatcttata agggcaatac cagaatacat agacatgaaa tcaacaaaag tcttcgatga 2760 aatgtatgtg tatatagaaa agaaccccaa gaacacaata gaagagatta tggaagtaat 2820 gaaagatcat aagacatttt atttcacatt ttttaataaa ggccagaaaa catttaaaga 2880 ccgagaaata tttgtgggcg aactacaggc caaaatgtgc ctttattgta ttgagcgtat 2940 ctcgaaggaa agatgcaagt taaacccaga agaaatgatt tctgaaccag gagatggtaa 3000 gttaaaaaaa ttagaacaaa aagcggaaga cgaaatgaga ttcattgtcg aaaacttaca 3060 accagtgggc aaatgtgacc ctaattcatt aatagaagct gttaacaaac ctaaaggttc 3120 caaatttgaa attaatgcag acatgtcaaa atggagtgcc caagatgtcc tattcaagta 3180 tttctggctt tttgcaatgg acccaatact ttatcctaat gagaaaaaaa gaatactata 3240 cttcctatgt aattacatgc agaaaagatt gatattacct gacgaaatga tgtgttcaat 3300 actagatcaa aaagaagtac gacagtttga tctaataagg gagatgactg agaattacaa 3360 aagaaactac gttataatta agagaaattg gcttcaaggg aatttaaatt atacttcaag 3420 ctatctacac agttgctcaa tgtcagtata caaagaagtt gtaaagagag caacggcact 3480 cttagatggg aaagttgtcg taaactctct tgtacactca gatgataacc agacttcagt 3540 caatttcatc caggataaat tgtcaaatga ttatctcttg tcatttgtaa tgaaaacatt 3600 tcaaaaagtc tgtgcatcat ttggaaacca ggtgaatatg aaaaagacat atgccacaaa 3660 tttcataaaa gagttcgtgt cactcttcaa catatacggt gaaccatata gcgtatatgg 3720 tagattcctt ttaacatgtg ttggtgattg tgcatatata ggtccatatg aggattttgc 3780 cagcagacta tctgcaacac agactgccct gaagcatggg tgtcctccat ccaatgcatg 3840 gcttagcatt gctatgaatt catggatgac atacaatact tacaacatgt taccaggtca 3900 agcaaatgac cctgttaaga gcttggcaat ggaaagaaaa catataccca tcgaacttgg 3960 gggtttactg aattcagaac tttcgactat agcattgctt gggctagaat ctggcaatac 4020 aacatttttg acaagcctat tgaaaaggat gtcaggtgtc atgattcgtc gagaaaacgt 4080 tactaaacaa gttcaagata taaaaaagtg ggatatctct tctctaaaaa agcatgaact 4140 cttttaccta aaattgttaa ggtatgttta tatggatgca atcatcacta atgactcgac 4200 cgtaggagaa acaagcgaaa tgaggaacag atcattgata acgcccagga aatttacaac 4260 caagggctca cttaagagat taaaatcata tgatgattat aaagaaattt gtgaaagttc 4320 agaaaaaatt gaggaactat ttcaatatat gattcggaac cctgaacttt tagttacaaa 4380 aggagaaaca atcactgagt acaaaatgac catattatat agatataact caaaaaaatt 4440 caaagaaagc ctctcagtac agacgccggt tcaactgatg atagaacaaa tattgtattc 4500 taataaacct acagtcgatt ataattcaat atctgataaa ttttatagta ttgatgattt 4560 agaacttgaa tcagatgaaa taattggaaa atacacaatc tcagaaacat tgtcaaaaat 4620 tgtactggat ttagaaaaac tgcctttaac taatgatgat gtagcaacag tatataattt 4680 ctgtatatgc aatgatcctc tgactttatc aattgccaac tcacttattt taaaagtaga 4740 aagtagtgag gtgagcagaa caggattagt tgctactacc atgcctgaga tcagaaacct 4800 aaagttgata cagtactcac cagctattgt gatacgggca tatattcatt ctaattatga 4860 ttttaaagga attgatgaag cagaactgag aagagacgtg cttcatttgt ctgagtttat 4920 agataaaaca ggtttaaaag acagaatgga gaaaaaaatt gaagattatt ataatagtaa 4980 tgatgatgaa agtctcatgt tcaggttaag agaactaact aagttttatc agatttgtta 5040 tgattatata aaatcaacag aacacaaagt gaaagttttt atattgccaa caaggacata 5100 tacaagccag gattttatct cagtagtaat ggggaattat ttgtctgaca aatcatggtc 5160 tatagttcat tttttgaaac cgcttgaggg aaataattat aaaggacagg ttgcaaaaga 5220 tccaatgatt gaattacaaa ttgcagatga gtgcttcaga ttactagctc atttcacaga 5280 ttatttcatt gctgattaca caaagaaaca attcttaata aaaattctct cagaatttaa 5340 attcaaagat tttaaagtta gcaatttatg gcagctgctc aaacagtcag agcatagatt 5400 aaagtttttg ccaatactct atatcatgga cgaattgaca aatagagatc tggtaaaata 5460 tgactcttat agaaccgatg agaggataac atggaatgat tggcagttat ctcaacgttt 5520 aaatattggc aggattgact tagtaataaa cggatataat aaaagaattg ctatatatgg 5580 tgaagacaat aaactattag aagccatact atatatcaag agagatactt ttgatcagat 5640 accaagtcaa tctcggaaat tgttgaatgc tagacacaat ttactgcttg agaaaatgga 5700 gccaatcaaa gtattagact ccagatcttg gtacatatgt taccagaagg gaaggaagaa 5760 caggtatgat tatgttgtgt tgaatgggta tcagataaac tctagaaaca agagtataga 5820 cgatgctgca cacaggtcaa aaaattatac agttgccgtc tgtccagtag gcatcaacac 5880 attcactgac actgaatctg ttgatattgc aagtgttaaa aatctgaact atgaacatac 5940 ctcttgtacg aaactaaaga tcaatgaata tgaaactgct actattagaa gatgcaacct 6000 ttctaaaatg tcattttttg atgggcctca aatcattgca ggatccttga acatcaacaa 6060 tttaatagta tctaaatcac ttctaactct aaattataaa agtattttga aagttgatct 6120 gctttccata ctgcctatat ttaactgcaa tcaaacggat caggaaatag attttgaatt 6180 cttgtcagaa gagccagttg atgtggacga agttatggat ttagaatcgc agcctgtttt 6240 ttctatcact gtttcaaaaa aatccaaagg caagataacg tacaagaagg caatagaaga 6300 atgtataaaa ataaatacag agaaatttga ggatttattt gatttctttg aagatggatt 6360 ttactcttca aagaatttag gagtaattag aactatagtt gcattaattg atgaactgac 6420 aactaatgaa tggagtacga aattaaaaga atcaatacat ttatgcatgt caacaaaggg 6480 ctatgatgca atgtttcaca cattcacatt acaagacgca tttttattga aagatggtgt 6540 taataaaatt ataaattggg agaaaataat aatcttcttg aaaaaaatgc cagacataag 6600 agaagaacca tggaaagaaa tatttgcaaa tttcaagaca aaagctatat tgaatgcaaa 6660 tgaggagatg agcaagaaaa gtgctagctt aacattggag gacttggcag aggaacttgc 6720 tgaagccgga ggccattcaa aatatcaatt tcactaatca agaaaatgta tacaatagaa 6780 tcccatagca acaaaacata atcatacctg ttcttccttc ct 6822 //