ID HM639779; SV 1; linear; viral cRNA; STD; VRL; 4376 BP. XX AC HM639779; XX DT 03-MAY-2012 (Rel. 112, Created) DT 03-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Oyo virus segment M polyprotein gene, complete cds. XX KW . XX OS Oyo virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Peribunyaviridae; Orthobunyavirus; OC unclassified Orthobunyavirus. XX RN [1] RP 1-4376 RA Palacios G., Savji N., Tesh R., Bussetti A.V., Lipkin W.; RT "Genetic Diversity of Orthobunyaviruses"; RL Unpublished. XX RN [2] RP 1-4376 RA Palacios G., Savji N., Tesh R., Bussetti A.V., Lipkin W.; RT ; RL Submitted (07-JUL-2010) to the INSDC. RL Center for Infection and Immunity, Columbia University, 722 West 168th RL Street, New York, NY 10032, USA XX DR MD5; 5c9721a37f901625e65bc5f27c72fe16. XX CC GenBank Accession Numbers HM639778-HM639780 represent sequences CC from the 3 segments of Oyo virus. XX FH Key Location/Qualifiers FH FT source 1..4376 FT /organism="Oyo virus" FT /segment="M" FT /mol_type="viral cRNA" FT /country="Nigeria" FT /collection_date="1964" FT /db_xref="taxon:1027632" FT CDS 42..4337 FT /codon_start=1 FT /product="polyprotein" FT /db_xref="GOA:I1STB7" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR005168" FT /db_xref="InterPro:IPR026400" FT /db_xref="UniProtKB/TrEMBL:I1STB7" FT /protein_id="AEE01390.1" FT /translation="MSLMENHIILFLLALSNSAMSIPTENCFQGGHVVKHEVMNHGVTN FT LCLKDDVSILKISSTQQRNKTMFDNTVSRFWNVKNWHKCNPVPVIDGTFIVYDIDKFFN FT VVPKVFSCKSECRIHIDKDEGCIILSSEHMNHYTISGTSTTTGWFRSKTNIPLQNTCEH FT ITISCGTNRHTVHACFKTHMSCIRFFKNTILPNRMSKSFCSNIEVILITSFALITYIIL FT LILSGTYIIYLLLPIMWPITYIFGKLYSKSCVKCRDCSLPMHPLSKCGTECMCGTEFGT FT TERLKKHRESQLCKGYKSGPAARTLCKNKGSNLVLSIFLSVIFFSFLTPINAECYTIDE FT ITDVLLNNPKSSSTYFDIQNIIIWSISFSILIIVMLYKKLEETYTNKTVLHCTECSMFH FT RLHGLKRNGDFTNKCESCICGFTANFYHEPEGEYETINPYVHTLRESCLYSVSRNFQKL FT FKIFIVVVILLNSMSPVFGTCIHQDADLLKCGAYNLTDDCEKNRIHSEIVEKAKEFLHP FT VEMNVLDIMRLNISTIQKYIEVSNNMHYKIIIEKLLYTKYCKYFTNLFNGNAEESASFR FT FYLYTHQLSLCVEKPIYDLCRCLARHINCHAASIDVIPSAVFYKLPNGHYNHDLNIALR FT GIYFAFRGIVGGNIYMLVKEKKTDTLVSYLESFLGKINKNFELKAIIEFSINLLKMNIP FT YTLDDHWPEIGVPENLPQARGINARINISIGDPIYECNSAYIVSCTSKLPNMPNMQFYE FT CDNKHYRMPAEGGVFFKNRLCVGDTFCIKQFQPVFSNLTIGGLVCIKSNPQVDTVWSKE FT SKSCEMEDIGHCLIKNLNTSLILCSDNKLYHTDKNIQHSGSSNIVDYCFSKDCSKRRPI FT NPLNVQNCIWDSNKMHKLGASIINYQSIESYKQTLETTIEGDLNIHKFVGTSKYPIILP FT TYKSIYIQGVENDNGIENAYIQGEIPIFAGSSNGLHIYTKEGNIIFDVIIYVKQAEYTS FT TYNEIYKTGPTIGINTRHNEECTGKCPSHFQHHRKNWIYFSREHTSTWGCEEFGCLAIG FT VGCVYGECQDIIRPEASVFKKETDDQPNVEFCIVLSHKSECTHINILQPIMTDHFEFMF FT ENTEVQTMPELVFIKKNKVFVGQINDVNGFAKECGNVKMINREVIGDGDPIFDYLCYPM FT HRKDIVVKKCYTNSYHMCTMLREDKTLIFNPNNSHITIHKQGLKLGTLKYKVKLGDVLY FT KQYVNSIQIDGQGKCVGNIHSSSGISCEIVIDSNGISTCRIESNCKPSHVNTEIIAGNQ FT KLFLKMQCYNNNPVSIRICNIDLKIESHLSVTHETIDITHISDSHYIIEKDEKCKTWLC FT KAVDEGISNIFDGFLTSFTKYFYIAYCYNSSCYCSFVNILYFHSSWEVHKKTPSSSSNF FT RRNGQEISLKLTVYNWLYQKLGFPNTITA" XX SQ Sequence 4376 BP; 1607 A; 664 C; 760 G; 1345 T; 0 other; agtagtgtgc tccacttaaa caaaaacaac cacataacaa tatgtcttta atggagaatc 60 atataatact ttttttgctc gcattgtcca actcagctat gagtatccct acagaaaact 120 gtttccaggg agggcatgtt gtaaagcatg aggtaatgaa ccatggagtt acaaatttgt 180 gcttaaaaga tgatgtttct attttaaaaa tatcaagtac tcagcaaaga aacaaaacaa 240 tgtttgataa tactgtgtca cgattttgga atgttaagaa ttggcataaa tgcaatccag 300 tacctgtgat tgacggaact tttatagttt atgatataga taaatttttc aatgttgtac 360 caaaagtttt ttcgtgtaag tctgagtgca gaatacatat agacaaagat gaaggctgta 420 taatcttgtc aagcgaacat atgaatcatt acacaatttc aggtacatca acaacaactg 480 gatggtttcg atcaaaaaca aatataccat tgcagaatac atgtgagcat atcacaatat 540 cctgcggtac aaataggcac acagtccatg catgcttcaa aactcacatg tcatgtatta 600 gattctttaa aaacacaata ctaccaaata gaatgtcaaa gtctttctgt tcgaatatag 660 aagtaatttt aatcacaagc tttgcattaa tcacatatat catattacta atattatctg 720 ggacatatat tatctatctg cttttaccaa ttatgtggcc aataacttac atatttggaa 780 agctttattc aaaatcttgc gttaagtgca gagattgttc attgcccatg catcctttat 840 ccaaatgcgg gactgagtgc atgtgtggaa cagaatttgg gacaactgaa cggctgaaaa 900 aacataggga aagccaatta tgcaaaggat ataagtctgg tccagctgct agaactttgt 960 gtaaaaataa aggatcaaat ttggtgttga gcatatttct ctctgttata tttttttctt 1020 ttctaacacc tattaatgct gaatgctata caattgatga aataacagac gtattattaa 1080 acaatcctaa aagcagtagt acttattttg atattcagaa catcataata tggagcatta 1140 gcttctctat attaataata gtgatgctgt ataagaaatt agaagaaact tatacgaaca 1200 aaactgtctt gcattgtact gaatgttcta tgttccatag attacatggc ttgaaaagga 1260 atggagactt tacgaacaaa tgtgaatcat gtatatgtgg gtttacagca aatttctacc 1320 atgaaccaga aggtgagtat gaaacaatca acccttatgt tcatacatta cgagagagtt 1380 gcttgtattc cgtcagcagg aacttccaaa aactctttaa aatattcata gttgtagtga 1440 tattgctgaa cagtatgagt ccagtatttg gcacatgtat acatcaagat gctgatttat 1500 tgaaatgtgg agcatataat ttaacagatg attgtgaaaa aaacaggatc catagcgaga 1560 tagttgaaaa ggccaaagag ttcttgcatc cagtggaaat gaatgtactt gacatcatgc 1620 gattaaatat aagtactata caaaaatata tagaggtatc aaacaatatg cattacaaaa 1680 taataattga aaaactgcta tatacaaaat attgtaagta ttttactaac ctattcaatg 1740 gtaatgcaga agaatctgca tctttcagat tttatctata tacccatcag ctctcactat 1800 gtgttgaaaa gccaatttat gatttatgtc ggtgtctagc aagacatata aactgccatg 1860 ctgcatctat cgatgtgata ccttctgctg tattttataa attgcctaat ggtcactata 1920 atcatgactt aaatattgct ttaagaggga tttattttgc atttagagga atagttgggg 1980 gcaatatata tatgttagtc aaagagaaaa aaacagatac tcttgttagt tatttagaaa 2040 gctttttagg gaaaataaac aaaaattttg aactaaaggc tatcatagaa ttttctatta 2100 atttattaaa aatgaatatt ccatatacac ttgatgacca ttggccagaa ataggtgtcc 2160 cagagaattt accgcaagct agggggatca atgcaaggat aaatatttca attggagatc 2220 ctatatatga atgtaactcc gcatacatag tttcctgcac aagcaagttg cctaatatgc 2280 ctaatatgca attctatgaa tgtgacaaca agcattatag aatgccagca gagggaggag 2340 tattctttaa gaatagatta tgtgtaggtg acactttctg tataaaacag ttccaaccag 2400 tctttagcaa tttaacaata ggaggattag tatgtataaa atcaaaccct caagttgata 2460 ctgtctggag taaagaatca aaaagttgtg agatggaaga tattgggcat tgcttaataa 2520 aaaaccttaa tactagtcta atattatgtt ctgataacaa actttaccat actgataaaa 2580 acatacaaca ttcaggcagt agtaatattg tagattactg cttctcaaag gactgcagca 2640 agaggagacc tattaaccca ttaaatgtgc aaaattgcat ttgggactct aataaaatgc 2700 acaaattggg tgctagcatt atcaattatc aaagtattga atcatacaaa cagacattgg 2760 aaacaacaat agagggagat ttgaacatac ataaatttgt cggcacttca aaatacccta 2820 ttatactccc tacatataaa agtatttaca ttcaaggcgt agaaaatgat aacggtatag 2880 aaaatgcata tattcaagga gagatcccaa tattcgcagg atcaagcaat ggtttacaca 2940 tttatacaaa ggaaggaaat ataatctttg atgtaataat ctatgtaaaa caagcagaat 3000 atacatcgac ttataatgaa atatataaaa cagggcctac aattgggata aacacaagac 3060 acaatgaaga atgcacaggg aaatgtccaa gtcattttca gcaccataga aagaattgga 3120 tttatttttc aagagaacat acgagcacct ggggctgtga agagtttgga tgtttagcca 3180 ttggtgttgg atgtgtttat ggtgaatgtc aggacataat cagaccagag gcttctgtat 3240 ttaaaaaaga gacagatgac caaccaaatg tagaattttg tattgttctt tcacacaaat 3300 ctgagtgcac tcatataaat atattgcagc ccataatgac tgaccatttt gaatttatgt 3360 ttgagaatac agaagttcaa acgatgccag aattggtttt tataaagaaa aacaaagtat 3420 ttgtaggcca gataaatgat gtaaatggat ttgctaaaga atgtggcaac gtaaaaatga 3480 taaatagaga agtaattgga gacggtgatc ccatttttga ttatttatgt taccctatgc 3540 acaggaaaga tattgttgta aagaagtgct atacaaatag ctatcatatg tgtactatgc 3600 tgagggaaga taaaactcta attttcaacc cgaataattc ccatatcaca atccataaac 3660 agggcttaaa gttaggcaca ttaaaataca aagtaaaatt aggagatgtt ctctataaac 3720 aatatgttaa ttcaattcaa attgacggtc aaggaaaatg tgttgggaat atccattcat 3780 ccagtggtat ctcttgcgag attgtaatag atagcaatgg aataagtact tgccgaatag 3840 aatcgaattg taagccttca catgtcaata ctgaaataat tgcagggaat caaaaattat 3900 ttttaaaaat gcagtgttac aacaataacc ctgtatctat tagaatatgc aatattgatt 3960 taaaaattga atcacaccta tcagttaccc atgaaacaat cgacatcacc cacataagcg 4020 attcccatta tataattgaa aaggatgaaa aatgcaagac ctggctttgt aaagccgtag 4080 atgaagggat aagcaatata tttgatggtt ttcttacctc attcacaaag tatttctata 4140 tagcatattg ctataatagt agctgttatt gtagctttgt taatatactt tattttcatt 4200 ccagctggga agttcataaa aaaacacctt caagctcaag caattttaga agaaatggac 4260 aggaaattag tttaaaatta accgtttata attggctata ccaaaagttg ggttttccca 4320 acacaataac tgcttaattt cttgaatgtt tttgttttaa atggtagcac actgga 4376 //