ID HM626517; SV 1; circular; genomic DNA; STD; VRL; 2606 BP. XX AC HM626517; XX DT 22-MAY-2011 (Rel. 108, Created) DT 22-MAY-2011 (Rel. 108, Last updated, Version 1) XX DE Sida golden mosaic virus - whitefly VEM Citra Florida, complete genome. XX KW . XX OS Sida golden mosaic virus - whitefly VEM Citra Florida OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RC Publication Status: Online-Only RP 1-2606 RX DOI; 10.1371/journal.pone.0019050. RX PUBMED; 21544196. RA Ng T.F., Duffy S., Polston J.E., Bixby E., Vallad G.E., Breitbart M.; RT "Exploring the diversity of plant DNA viruses and their satellites using RT vector-enabled metagenomics on whiteflies"; RL PLoS One 6(4):E19050-E19050(2011). XX RN [2] RP 1-2606 RA Ng T.F.F., Bixby E., Vallad G., Duffy S., Polston J.E., Breitbart M.; RT ; RL Submitted (02-JUL-2010) to the INSDC. RL University of South Florida, 140 7th Ave S, Saint Petersburg, FL 33701, USA XX DR MD5; e265dbb43674ca3ed06ccd57abded65d. DR EuropePMC; PMC3081322; 21544196. XX FH Key Location/Qualifiers FH FT source 1..2606 FT /organism="Sida golden mosaic virus - whitefly VEM Citra FT Florida" FT /host="Bemisia tabaci" FT /mol_type="genomic DNA" FT /country="USA:Florida, Citra" FT /note="acronym: SiGMV" FT /db_xref="taxon:1032477" FT stem_loop join(1..13,2586..2606) FT gene 385..1155 FT /gene="MP/BC1" FT CDS 385..1155 FT /codon_start=1 FT /gene="MP/BC1" FT /product="movement protein" FT /db_xref="GOA:F6KBB3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:F6KBB3" FT /protein_id="AEF12632.1" FT /translation="MYPVRVKRGYYFPNRRFTTRNTVFNRSIAGKRHDGRRRGGRSFKT FT SDEPKMSAQSIHENQYGPDFVMSHNSAISTFISYPDLGKIEPGRSRSYIKLKRLRFKGT FT VKIERVQSDVNMDGSAPKVEGVFSLVVVVDRKPHLTASGGLHTFDELFGARIHSHGNLS FT ITPSLKDRFYIRHVFKRVLSVEKDTLMDDVEGSTTLSNRRFNCWSTFKDLERDSCKGVY FT GNVSKNALLVYYCWMSDAVSKASSFVSFDLDYIG" FT gene complement(1222..2103) FT /gene="NSP/BV1" FT CDS complement(1222..2103) FT /codon_start=1 FT /gene="NSP/BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:F6KBB4" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:F6KBB4" FT /protein_id="AEF12631.1" FT /translation="MESQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTAR FT LSRSCMKIDHCVIEYRQQVPINATGSVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SXSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTDKDVDFSHVDYGRWERKPIRCGSMSRVVLRGPIEIRPGESWASGSTIGAAQSDAD FT SEVDNEIHPYRHLNRLGTSVLDPGESASIVGAQRAVSNITMSMGQLNELVRTTVQECIN FT NNCTASQPKSLQ" XX SQ Sequence 2606 BP; 651 A; 595 C; 617 G; 742 T; 1 other; accggatggc cgcgctttgg agtacgctcc ctcccccgct cccccctggt gccgctctca 60 cacgcgctct cccattggtg ctggtgcctc tccatttttt attgactgcc ctttaatttg 120 aattaaaggg agttctgcta gtcgcgcgag tatacttgaa atttgaaaaa tttcctcgcg 180 tctctagact atggcccgtt gtactacacg atcgacgtgg cgttttctgg accatgctgc 240 tgagtctgtt taaccaatgt gaaccatccc tttgtatata atggaggaga ccgacagtca 300 tatcgtaccc atgctgactc agccttccac cgcgtttaat ttgtctatcc caacctgtgt 360 ttaacctttg attaccggct gataatgtat cctgtgaggg ttaaacgtgg ttattacttc 420 cctaaccgac gatttactac acgtaacact gtgtttaacc gttcaatcgc tgggaaacga 480 catgatggga gacgtcgagg aggtcgatct ttcaagacca gtgatgagcc caaaatgtca 540 gcccaatcca tacatgagaa tcagtatggc ccagattttg tgatgtctca caattctgcc 600 atttccacat tcatcagtta tccagatctg ggcaagatag aaccgggtcg aagtaggtcc 660 tatatcaagt tgaaacgact ccgtttcaaa gggactgtta agattgaacg tgtccagtcg 720 gacgtgaaca tggacggttc tgcgccaaag gttgaaggag tattctcact ggttgtggtt 780 gtggatcgga aaccccactt gactgcatct ggtggtctac atacattcga cgagctcttc 840 ggtgcaagga tccacagcca tggtaatctg agcataaccc cttccctgaa agatcgcttc 900 tacataagac acgtgttcaa acgtgtactg tccgtggaga aggatacgct tatggacgac 960 gtggaaggct ccacaacgct ctctaacagg cgattcaact gctggtccac gtttaaggat 1020 cttgaacgtg attcatgcaa gggtgtctat ggcaacgtca gcaagaacgc cctcttagtt 1080 tattattgtt ggatgtcaga tgctgtgtct aaggcatcct cttttgtatc gttcgacctt 1140 gattatatcg gttgattaat gataaattaa tcagttattc tattaatgga cagtccaact 1200 atgaacaacg aaacatgaat tttattgcaa tgattttggc tgagaagccg tacagttatt 1260 attgatacat tcttggactg tagtccttac aagctcgttc aactggccca ttgacattgt 1320 tatgttcgat accgctctct gggctcccac aatagacgca gactctcccg ggtctagaac 1380 gctggtcccc agcctgttta ggtgtctgta tgggtggatc tcgttatcca cctccgaatc 1440 cgcatctgac tgggccgctc ctatggtact cccggaagcc catgactcac caggccttat 1500 ttcaattggg cctcgtaata caaccctgga catggacccg catctgatgg gcttcctttc 1560 ccatcttccg tagtcgacgt gggagaagtc cacatcttta tcggtgaact gtttggacag 1620 gatcttcact gtcggtgccc ggaaggggat atccacggag tgtttcgcag tcgacaattt 1680 cagcttcccc ttgaacttcg cgaagtgggt tctctgatga acattcgtat cgcagactct 1740 gtagtacaac ttccatggaa ttgggtcctt gagcgagaag aacgaagmtg aaaaatagtg 1800 gagatctatg ttgcatctga tcggaaaagt ccacgacgcc tgtaacgact cgttgtccgt 1860 cattctcttg tcgtggatct ccactatcac cgacccagtc gcgttgatcg gtacttgctg 1920 cctgtactca atgacgcagt gatcgatctt catgcagcta cgactcagcc tcgccgtcaa 1980 ctgcgacgcc gtcgacggaa attgcagaat tatctcagtt aggtcatgtg aaagctgata 2040 ttcgtcccgg tgagactcta tgtaattgaa ggcgttcgga ggattaacta actgagattc 2100 catttgaaga agaaaggccg cgcagcggaa ccgattgctg aagttgaatc ggaaagaaga 2160 tgaacaactg tagaacagga cgaacagtgt tcgatggctg agtttagatc tcgaagaagg 2220 taaagataga actttctttc tgtggttgag agtgtcggat cgttctgaca gttactgttt 2280 agaagattta agaacggaaa tttgtttaac ccttgatgtt tatgagaaag aaaggagtgt 2340 tgatgaataa tttgggagaa ttctggaaat gaaagagttt gtgtatgaac ccagaacttc 2400 tgggttgact ggtatttaaa atgggaaagg gttcatcaac cgggtggcat tcttgtaata 2460 atgagtggta ctccagttga ggtactccaa ttgagccccc tcaaacttgc tcattcaatt 2520 ggagtattag agtatgttat atagtagaac cctctataga actttcaatc tggttcgcac 2580 acgtggcggc catccgctat aatatt 2606 //