ID   HM626465; SV 1; linear; genomic RNA; STD; VRL; 858 BP.
XX
AC   HM626465;
XX
DT   10-NOV-2010 (Rel. 106, Created)
DT   10-NOV-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate Coimbatore polyprotein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-858
RA   Nirmal R., Angappan K., Kumar K.K., Balasubramanian P.;
RT   "Molecular characterization of papaya ring spot virus isolates from Tamil
RT   Nadu";
RL   Unpublished.
XX
RN   [2]
RP   1-858
RA   Nirmal R., Angappan K., Kumar K.K., Balasubramanian P.;
RT   ;
RL   Submitted (01-JUL-2010) to the INSDC.
RL   Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu
RL   Agricultural University, Lawly Road, Coimbatore, Tamil Nadu 637001, India
XX
DR   MD5; 85774f0c4bf15b2a08fea9992314f00f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..858
FT                   /organism="Papaya ringspot virus"
FT                   /host="Carica papaya"
FT                   /strain="PRSV-P"
FT                   /isolate="Coimbatore"
FT                   /mol_type="genomic RNA"
FT                   /country="India"
FT                   /isolation_source="infected fruits and leaves"
FT                   /collection_date="28-Jan-2009"
FT                   /proviral
FT                   /PCR_primers="fwd_name: HRP 52, fwd_seq:
FT                   tccaaraatgaagctgtggatgt, rev_name: RKJ3, rev_seq:
FT                   gttgcgcatacccaggagag"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..>858
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E5FXA8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E5FXA8"
FT                   /protein_id="ADP89517.1"
FT                   /translation="SKNEAVDVVLNDKLKEKEKERDKEREKEKKDKKDASDGGYVSTST
FT                   KTGERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKAVLNLNHLLQYNPQQIDISNTR
FT                   ATQSQFEKWYEGVRNDYALSDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDY
FT                   PIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDF
FT                   YEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSL
FT                   LGMRN"
XX
SQ   Sequence 858 BP; 299 A; 147 C; 212 G; 200 T; 0 other;
     tccaagaatg aagctgtgga tgtggttctc aatgataagc tgaaggagaa agaaaaagaa        60
     agagataaag agagagaaaa agaaaagaaa gacaagaagg atgctagtga cggaggttat       120
     gtgtcaacta gcacaaaaac tggagagaga gatagagatg tcaatgctgg gactagtggt       180
     acattcacag ttccaagaat caagtcattt actgataaaa tgattttgcc cagaattaag       240
     gggaaagctg tccttaattt gaatcatctt cttcagtata atccacagca aattgacatc       300
     tcaaacactc gtgccacaca atcacagttt gagaagtggt atgagggagt gaggaatgac       360
     tatgccctta gtgataatga aatgcaagtg atgttaaatg gcttaatggt ttggtgtatc       420
     gaaaatggta catctccaga catatctggt gtctgggtca tgatggatgg tgagactcag       480
     gtcgattacc caattaaacc attaattgaa catgcaactc cttcatttag gcaaatcatg       540
     gctcatttca gtaacgcggc agaagcatat atcgcgaagc gaaatgcaac tgagagatac       600
     atgccgcggt atggaatcaa gagaaatttg actgacatta gcctcgctag atatgctttc       660
     gatttctatg aggtgaactc aaaaacacct gatagagctc gagaggctca tatgcagatg       720
     aaggcagctg cactgcggaa cacaaatcgc agaatgtttg gaatggacgg cagtgtcagt       780
     aacaaggaag aaaacacgga gagacacaca gtggaagatg tcaatagaga catgcactct       840
     ctcctgggta tgcgcaac                                                     858
//