ID   HM623426; SV 1; linear; genomic RNA; STD; VRL; 681 BP.
XX
AC   HM623426;
XX
DT   09-NOV-2010 (Rel. 106, Created)
DT   09-NOV-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Tomato mosaic virus isolate Ls-K coat protein (cp) gene, complete cds.
XX
KW   .
XX
OS   Tomato mosaic virus
OC   Viruses; Riboviria; Virgaviridae; Tobamovirus.
XX
RN   [1]
RP   1-681
RA   Liao F.R., Lin S.M., Wu Y.;
RT   "Detection and identification of Tomato mosaic virus in tomato seed";
RL   Unpublished.
XX
RN   [2]
RP   1-681
RA   Liao F.R., Lin S.M., Wu Y.;
RT   ;
RL   Submitted (01-JUL-2010) to the INSDC.
RL   Plant Quarantine Lab, Xiamen Exit-Entry Inspection and Quarantine Bureau,
RL   No. 2165, Jiangang Road, Haicang, Xiamen, Fujian 361026, China
XX
DR   MD5; bf0f89533e538b40f2cf3a71eb946bd7.
DR   RFAM; RF01072; TMV_UPD-PK3.
DR   RFAM; RF01077; TLS-PK2.
DR   RFAM; RF01115; TMV_UPD-PK2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..681
FT                   /organism="Tomato mosaic virus"
FT                   /host="Lycopersicon esculentum"
FT                   /isolate="Ls-K"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /isolation_source="tomato seed"
FT                   /PCR_primers="fwd_name: To-A, fwd_seq:
FT                   ccggatccatgtcttactcaatcac, rev_name: To-B, rev_seq:
FT                   gtaagcttgttaactgggccccaaccggggggt"
FT                   /db_xref="taxon:12253"
FT   gene            1..480
FT                   /gene="cp"
FT   CDS             1..480
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q780A8"
FT                   /db_xref="InterPro:IPR001337"
FT                   /db_xref="InterPro:IPR036417"
FT                   /db_xref="UniProtKB/TrEMBL:Q780A8"
FT                   /protein_id="ADP68582.1"
FT                   /translation="MSYSITSPSQFVFLSSVWADPIELLNVCTNSLGNQFQTQQARTTV
FT                   QQQFSEVWKPFPQSTVRFPGDVYKVYRYNAVLDPLITALLGAFDTRNRIIEVENQQSPT
FT                   TAETLDATRRVDDATVAIRSAINNLVNELVRGTGLYNQNTFESMSGLVWTSAPAS"
XX
SQ   Sequence 681 BP; 192 A; 138 C; 156 G; 195 T; 0 other;
     atgtcttact caatcacttc tccatcgcaa tttgtgtttt tgtcatctgt atgggctgac        60
     cctatagaat tgttaaacgt ttgtacaaat tcgttaggta accagtttca aacacagcaa       120
     gcaagaacta ctgttcaaca gcagttcagc gaggtgtgga aacctttccc tcagagcacc       180
     gtcagatttc ctggcgatgt ttataaggtg tacaggtaca atgcagtttt agatcctcta       240
     attactgcgt tgctgggggc tttcgatact aggaatagaa taatcgaagt agaaaaccag       300
     cagagtccga caacagctga aacgttagat gctacccgca gggtagacga cgctacggtt       360
     gcaattcggt ctgctataaa taatttagtt aatgaactag taagaggtac tggactgtac       420
     aatcagaata cttttgaaag tatgtctggg ttggtctgga cctctgcacc tgcatcttaa       480
     atgtataggt gctgaaatat aaagtttgtg tttctaaaac acacgtggta cgtacgataa       540
     cgtacagtgt ttttccctcc acttaaatcg aagggtagtg tcttggagcg cgcggagtaa       600
     acatatatgg ttcatatatg tccgtaggca cgtaaaaaag cgagggattc gaattccccc       660
     gttacccccg gttggggccc a                                                 681
//