ID   HM591199; SV 1; linear; genomic RNA; STD; VRL; 2176 BP.
XX
AC   HM591199;
XX
DT   03-OCT-2010 (Rel. 106, Created)
DT   15-MAY-2014 (Rel. 120, Last updated, Version 4)
XX
DE   Strawberry latent ringspot virus isolate Tibouchina-NZ polyprotein gene,
DE   partial cds.
XX
KW   .
XX
OS   Strawberry latent ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae.
XX
RN   [1]
RP   1-2176
RX   DOI; .1094/PDIS-07-12-0703-RE.
RX   PUBMED; 30722200.
RA   Tang J., Ward L.I., Clover G.R.G.;
RT   "The Diversity of Strawberry latent ringspot virus in New Zealand";
RL   Plant Dis. 97(5):662-667(2013).
XX
RN   [2]
RP   1-2176
RA   Tang J., Clover G.R.G.;
RT   ;
RL   Submitted (28-JUN-2010) to the INSDC.
RL   Ministry of Agriculture and Forestry, Investigation and Diagnostic Centre,
RL   231 Morrin Road, St Johns, Auckland 1140, New Zealand
XX
DR   MD5; 9c301e3e3a28a6cd6265196a64ee6835.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2176
FT                   /organism="Strawberry latent ringspot virus"
FT                   /host="Tibouchina sp."
FT                   /isolate="Tibouchina-NZ"
FT                   /mol_type="genomic RNA"
FT                   /country="New Zealand"
FT                   /collection_date="Nov-2003"
FT                   /db_xref="taxon:28351"
FT   CDS             <1..2139
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /note="contains large and small coat proteins"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:E2IQI7"
FT                   /protein_id="ADN88406.1"
FT                   /translation="PLQPARLTRSASYMPIQRSGAKTVLTFEDNQASLKEQQPLQARAS
FT                   FSFSGVSYGQQDRAALPSAPSPKCSFHNRVGCPCKQHTGEAEPSGLHEDLVPAASGGTE
FT                   AIFFSPKSVPVPGSAKFVGSHPFSFPINSNVGTTVYSLPLISTSLKDTEWGRYYRSYTF
FT                   MRFKPTVRLISSAPIQAKGLLWLCYDPCETLAKYPSRERALMLQGVWFMPGRHDSVTLT
FT                   IDELATPSGYSIMNSDHNGAFKVVIIKDLENFEVADLGMELSLFLDVQDIGMGIGPELP
FT                   LTDSFLPLRQVVVDFDLSTTTPKGKALVVPLNPLLPGFDGAQWYPSCSSSILENHRYWK
FT                   GTLVLEVIFNLPAMGGGTVEMGFANNSYSGWESDAYRHFGSTVVDLRAHRLLRAKVPLY
FT                   GYGGYLMGGSGSLFAVPPLTDYGQSLRFVLLFTAPLHISDTTKKGSVMIRYLGLEDCEY
FT                   IQPTTSLGRLNPATTLVASGAPVVQVGTSDWMEPPLLRLPLGLLQKKFRLLTISKWPKS
FT                   GFLFFPMTPSSHMPKLVGTFEGEVEQHSPLMHRSQENAQWCGSLTYYLSIRYSGATPQG
FT                   VLPMRPVCFGATVLDNILGKPCFVEKDTFIQVMPMADPRETIYLPTTESVAFYETPPRR
FT                   WVNTHFGATESYGVRTCPAWVLLQFPNEEASHLGVRDISLWVEPNISFRHAVGGFPILK
FT                   PTPAPSIDYYYENTFPVG"
XX
SQ   Sequence 2176 BP; 479 A; 508 C; 519 G; 670 T; 0 other;
     cctctccaac ctgctagact taccaggagt gcctcttata tgcctattca gcgatcagga        60
     gcaaaaacag ttctcacttt tgaggacaat caagcatccc tgaaggagca gcaacctttg       120
     caggctcgtg cttctttttc tttttctggg gtttcctatg ggcaacagga tcgtgccgct       180
     cttccttcag caccctcccc aaaatgttct tttcataata gggtgggttg tccttgtaag       240
     cagcataccg gtgaagcgga gccgagtggg ttgcatgaag accttgtccc tgcggcatct       300
     ggtggtaccg aagccatttt cttttcaccc aagagcgttc ctgttccagg tagtgctaag       360
     tttgttggct ctcacccctt ttcgtttcct ataaatagca atgttggtac caccgtctac       420
     tccctacctt tgattagcac ctccttaaaa gatacagagt ggggaaggta ttataggagc       480
     tataccttca tgcgctttaa accaactgtt agattgattt cttctgcacc catacaggcc       540
     aaggggctcc tgtggctatg ttatgaccct tgtgaaactc ttgcaaagta tcctagtagg       600
     gaaagagctt tgatgctgca gggtgtctgg tttatgccag gtagacatga ttctgtcacg       660
     ctcacgattg atgaacttgc aacaccttct ggctactcta taatgaatag tgatcataat       720
     ggagctttca aggtggtcat tattaaggat cttgaaaatt ttgaggtggc tgatcttggg       780
     atggaattat cccttttcct agatgtgcaa gatattggta tgggtattgg ccctgaacta       840
     cctctcacgg atagtttttt acctcttcgt caggtggttg ttgatttcga tctgtcaacc       900
     acaactccta agggcaaggc actggtggtt cctttaaatc ccttgcttcc tggttttgat       960
     ggagcccagt ggtatcctag ttgctcttct tctatcctgg agaatcaccg ttactggaaa      1020
     ggaactcttg tcctagaggt tatttttaac cttccggcca tgggtggtgg cactgtggaa      1080
     atgggctttg caaataactc atactctggg tgggaaagcg atgcctatcg tcactttggt      1140
     tcgacagttg tggatctgcg agcgcatagg ttgctgcgtg ccaaggttcc cttgtatggt      1200
     tatggtgggt atctaatggg gggtagtgga tctctgtttg ctgtaccgcc actcacagac      1260
     tatgggcaat ctttgcgatt tgtcctactt ttcacagcac cacttcatat cagcgacact      1320
     actaagaagg ggtctgttat gatccgttat cttggcctcg aggactgtga gtatattcaa      1380
     cccacaactt ctttggggag actgaatcca gcaacaaccc tagtagcatc tggagcgcct      1440
     gtcgttcagg ttggaacatc tgactggatg gagccaccac ttttgcgcct tcctctgggg      1500
     cttcttcaga agaagttccg tcttcttact atttccaagt ggcccaagag tggcttcctc      1560
     ttcttcccaa tgacaccaag ttcccatatg ccaaaattgg tgggcacttt tgagggtgaa      1620
     gttgagcaac atagcccttt gatgcatagg agccaggaga atgcccaatg gtgtggttct      1680
     ctgacgtatt atctctccat tcgctattcg ggagctacac ctcagggagt tcttcccatg      1740
     aggccagttt gttttggggc cacagttctg gataatatac tgggtaaacc ctgttttgtg      1800
     gagaaggaca cgtttattca ggttatgcca atggccgacc ctcgagagac tatttatctc      1860
     ccgaccactg agagtgtggc tttctatgag acaccaccaa ggcgttgggt caatacccat      1920
     tttggggcca cagaatcata tggagttcga acctgtcctg catgggttct cctccaattt      1980
     ccgaatgaag aggcttctca tttaggtgtt agggatatct ctttgtgggt ggagccaaat      2040
     atcagtttcc gacatgctgt cggtgggttc ccaatcttga aaccaactcc tgctccttct      2100
     attgactact actacgagaa tacttttccc gtaggttaat ctctgttggt gtttttctta      2160
     ggcatttctc aaggag                                                      2176
//