ID HM590588; SV 1; circular; genomic DNA; STD; VRL; 2383 BP. XX AC HM590588; XX DT 11-APR-2011 (Rel. 108, Created) DT 01-JUN-2011 (Rel. 109, Last updated, Version 2) XX DE Avian gyrovirus 2, complete genome. XX KW . XX OS Avian gyrovirus 2 OC Viruses; Anelloviridae; Gyrovirus; unclassified Gyrovirus. XX RN [1] RP 1-2383 RX DOI; 10.1007/s00705-011-0971-6. RX PUBMED; 21442232. RA Rijsewijk F.A., Dos Santos H.F., Teixeira T.F., Cibulski S.P., Varela A.P., RA Dezen D., Franco A.C., Roehe P.M.; RT "Discovery of a genome of a distant relative of chicken anemia virus RT reveals a new member of the genus Gyrovirus"; RL Arch. Virol. 156(6):1097-1100(2011). XX RN [2] RP 1-2383 RA Rijsewijk F.A.M., Teixeira T.F., dos Santos H.F., Cibulski S.P., RA Varela A.P., Dezen D., Franco A.C., Roehe P.M.; RT ; RL Submitted (25-JUN-2010) to the INSDC. RL Microbiol. Dept. Vir. lab., Fed. Univ. UFRGS, Avenida Sarmento Leite 500, RL Porto Alegre, RS CEP 90050-170, Brazil XX DR MD5; b6341e0f38802e277e47da99dfb8e628. DR EuropePMC; PMC4517707; 26196944. DR EuropePMC; PMC5309784; 28198372. DR EuropePMC; PMC5545856; 28780905. DR EuropePMC; PMC6341152; 29635866. XX FH Key Location/Qualifiers FH FT source 1..2383 FT /organism="Avian gyrovirus 2" FT /host="Gallus gallus" FT /mol_type="genomic DNA" FT /country="Brazil" FT /isolation_source="serum of diseased chicken in poultry FT production unit" FT /collection_date="14-Jul-2006" FT /clone="Ave 3" FT /db_xref="taxon:1002273" FT regulatory 27..32 FT /regulatory_class="polyA_signal_sequence" FT repeat_region 224..353 FT /rpt_type=DIRECT FT /rpt_unit_range=224..245 FT /note="imperfect 21nt repeats with putative enhancer FT function" FT regulatory 402..409 FT /regulatory_class="TATA_box" FT CDS 450..1145 FT /codon_start=1 FT /product="putative dual-specificity protein phosphatase" FT /note="VP2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:F4ZDR0" FT /protein_id="AEB00702.1" FT /translation="MSSGGLGDCSACETRAAGGSELPLRQEGQLGPSGAGSTGKTLNAD FT PPLSPTSNNYSVRTINGIRASNKFVSASRNDLDRDPNWYRVNYNYSIATWLRQCARSHD FT EICTCGRWRSHWFQEASGLVTQETQTDQLARDLRRLQRKGEAAKRKLDYLKRRGTPHKK FT TKTVTWQDYDDDDLVDALASTTEDDGTGDTDCDEDAIPGGVNFDMRVEDPLIAALRGGS FT STHTRAPMW" FT CDS 577..951 FT /codon_start=1 FT /product="VP3" FT /note="putative apoptosis function" FT /db_xref="GOA:F4ZDR1" FT /db_xref="InterPro:IPR006858" FT /db_xref="UniProtKB/TrEMBL:F4ZDR1" FT /protein_id="AEB00703.1" FT /translation="MQTPRSRRQATTTRSELLTAYEHPTSSCPPAETTSIEIQIGIGST FT IITLSLPGYASVRVLTTRSAPADDGGVTGSRRLADSSHRRPRRTSSPEIYVGFSAKERR FT QKENLITLREEGPPIKKLRL" FT CDS 953..2335 FT /codon_start=1 FT /product="putative nucleocapsid" FT /note="VP1" FT /db_xref="GOA:F4ZDR2" FT /db_xref="InterPro:IPR007291" FT /db_xref="UniProtKB/TrEMBL:F4ZDR2" FT /protein_id="AEB00704.1" FT /translation="MARLRRRRPRGRFGFYHRGRWHWRHRLRRRRYSRRGKFRYARRRS FT FDRRVKRRIFNPHPGSYVVRLPNPYNKLTLFFQGIVFIPEAQAFVKSTYTKTNLTVCHV FT ASINVNLREFMLATMPLDAKSKIGGPNPYPQHLQGCQWSAQTTQDAWPYSAGMSETKRP FT SVPPSEWWRWALLVMHPRAPGRFYNAPKLMTLDAMGDLLGGWQLFRHVRTKFRVLATMG FT QGAFSPVASLLVQNDYWSRGHLEGFPVKGAPPMCTMQRKTQQYGNVEANAPADEQWLPV FT NPPDPPVYPNQGGCSQNVAPGIYRLAGLQDSSRCFYSKACFPSFAALSAMGAPWSFPST FT QKPIQRGSFNKHSITGTGDPQGRRWLTLVPKGVEWITDDTMEQTQLDTDIATLFLAQGS FT PMWAPYKFGTFHKAMAITAMQTTPWCVVKVRSIWQLGNQRQPYPWQVNWYNEHTATDRY FT NP" XX SQ Sequence 2383 BP; 637 A; 654 C; 624 G; 468 T; 0 other; ggatcctccc ccccggaccc cccgtcaata aataattaaa taaagcaaat tgaattattt 60 atttattttc ggcgcgcgcg gcagcagcct gtacacagag acgtcgctcg ggtcctccgg 120 accctcgctc ctcaaccttt tcttattaaa atcatcaccc agcgcgacaa acgccacaag 180 gcgtggtaac caacgatatg taagtaaact gagactcata ccggtacagg ggggtacgtc 240 atcatgtaca ggggggtacg tcaccatgta caggggggta cgtcaccatg tacagggggg 300 tacgtcacca tgtacagggg ggtacgtcac catgtacagg ggggtacgtc acagccaatc 360 agaattgagc acgcccagaa acgcccctgg gcgggcagat cctatcaatt aggggatata 420 agcagagcgc ataccggtcg gcagtaggta tgtcatccgg cggtctcggg gattgcagcg 480 cctgtgagac ccgagccgct gggggcagtg aattgccgct taggcaagag gggcaacttg 540 ggcccagcgg agccggatcc acgggcaaga cactaaatgc agaccccccg ctctcgccga 600 caagcaacaa ctactcggtc agaactatta acggcatacg agcatccaac aagttcgtgt 660 ccgccagcag aaacgacctc gatagagatc caaattggta tcgggtcaac tataattact 720 ctatcgctac ctggctacgc cagtgtgcgc gttctcacga cgagatctgc acctgcggac 780 gatggaggag tcactggttc caggaggcta gcggactcgt cacacaggag acccagacgg 840 accagctcgc cagagatcta cgtcggcttc agcgcaaagg agaggcggca aaaagaaaac 900 ttgattacct taagagaaga gggacccccc ataaaaaaac taagactgtg acatggcaag 960 attacgacga cgacgacctc gtggacgctt tggcttctac cacagaggac gatggcactg 1020 gagacacaga ctgcgacgaa gacgctattc ccggaggggt aaatttcgat atgcgcgtag 1080 aagatccttt gatcgccgcg ttaagaggag gatcttcaac ccacacccgg gctcctatgt 1140 ggtaaggcta ccaaaccctt acaataagct taccctcttt ttccaaggca ttgtgttcat 1200 tccggaggct caagcatttg ttaaaagtac ttatacaaag actaatctta cggtttgcca 1260 tgtagcctca ataaatgtta acctccgaga atttatgctt gctacaatgc ctttagatgc 1320 aaagagcaaa atcggaggcc ctaatcctta tcctcagcac ttgcaggggt gccaatggtc 1380 agcacaaacg acgcaggacg catggccgta ctcggcgggc atgtcagaga caaaaagacc 1440 cagcgtacca ccgagtgagt ggtggcgctg ggctctcctg gtgatgcacc ctagagcacc 1500 tggcagattt tacaatgccc ctaagctaat gactctggac gctatgggag acctcttagg 1560 gggctggcaa ctattccgtc atgttagaac caagttcaga gtgctggcca ctatgggcca 1620 gggtgcattc tcaccggttg caagcctcct tgtgcaaaat gactattgga gcagggggca 1680 cttagagggc ttcccagtga aaggtgcacc gcctatgtgc accatgcaaa gaaagactca 1740 gcaatacggc aacgtggagg cgaacgctcc agcagatgag cagtggctac cggtgaatcc 1800 cccagaccca ccagtgtacc ctaaccaggg aggatgctcc caaaacgtgg ctccaggcat 1860 ataccggctt gcaggcttac aagacagtag cagatgcttt tattcaaagg cttgtttccc 1920 cagctttgca gcgctttctg ctatgggggc accctggtca tttcctagca ctcaaaaacc 1980 cattcaaaga ggctcattta acaaacattc catcacgggg acaggggacc cccagggccg 2040 acggtggtta acacttgtgc ctaaaggcgt ggaatggatc actgatgaca ccatggaaca 2100 aacgcaactg gacacagaca ttgcaacact cttcttagct caaggcagcc caatgtgggc 2160 accctacaaa ttcgggactt ttcacaaggc aatggccata acagcaatgc agaccacccc 2220 ctggtgcgtg gtgaaagtac ggtccatctg gcagctcggc aaccaaagac agccgtaccc 2280 atggcaagtg aactggtaca acgagcatac tgcaacggac agatacaacc cgtaattggg 2340 ggggggggtt ttgccccccc cacaaacccc ccccccccgg ggg 2383 //