ID HM585438; SV 1; circular; genomic DNA; STD; VRL; 2644 BP. XX AC HM585438; XX DT 16-JAN-2011 (Rel. 107, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Sida micrantha mosaic virus - Rhombifolia [Bolivia:Cerro Fraile 1:2007] DE segment DNA-B, complete sequence. XX KW . XX OS Sida micrantha mosaic virus - Rhombifolia [Bolivia:Cerro Fraile 1:2007] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2644 RX DOI; 10.1007/s00705-010-0876-9. RX PUBMED; 21170729. RA Wyant P.S., Gotthardt D., Schafer B., Krenz B., Jeske H.; RT "The genomes of four novel begomoviruses and a new Sida micrantha mosaic RT virus strain from Bolivian weeds"; RL Arch. Virol. 156(2):347-352(2011). XX RN [2] RP 1-2644 RA Wyant P.S.; RT ; RL Submitted (24-JUN-2010) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX DR MD5; 487dd836fc261b38549443b798e55d33. XX FH Key Location/Qualifiers FH FT source 1..2644 FT /organism="Sida micrantha mosaic virus - Rhombifolia FT [Bolivia:Cerro Fraile 1:2007]" FT /segment="DNA-B" FT /host="Sida rhombifolia" FT /strain="SimMV-rho[Bo:CF1:07]" FT /mol_type="genomic DNA" FT /country="Bolivia" FT /lat_lon="18.28 S 63.68 W" FT /collection_date="Nov-2007" FT /db_xref="taxon:932067" FT gene 529..1305 FT /gene="BV1" FT CDS 529..1305 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:E7CT12" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:E7CT12" FT /protein_id="ADV15530.1" FT /translation="MNMFPSKYRRGWSTNQRRSYTRNSVFKRSYASKRSDVKRRPSNPN FT KTQEDSKMTTQRIHENQFGPEFVMGHNSAISTFITYPSLVKAVPNRSRSYIKLRRLRFK FT GTVKVERVHADVNMDGSNPKIEGVFSLVVVVDRKPHLGTSGALHTFDELFGARIHSHGN FT LAIAPSLKDRFYIRHVFKRVLSVEKDTTMVDLEGTTTLSTRRFSCWSSFKDVDRESCNG FT VYANISKNALLVYYCWMSDNMSKASTFVSFDLDYIG" FT gene complement(1386..2267) FT /gene="BC1" FT CDS complement(1386..2267) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:E7CT13" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:E7CT13" FT /protein_id="ADV15531.1" FT /translation="MESQLVNPPNAFNYIESQRDEYQLSHDLTEILLQFPSTASQLSAR FT LSRSCMKIDHCVIEYRQQVPINAVGSVVVEIHDKRMTDNESLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFSEKDIDFSHVGYGKWERKMIRSASISGVGLPNPIEIRPGESWAVRSTVGISQSDAD FT SEIESATHPYRHLHRLGTSSLDPGDSASIVGAQRAQSNITMSMAQLSELVRATAQECIN FT SNCTPSQPKSLH" XX SQ Sequence 2644 BP; 669 A; 548 C; 640 G; 787 T; 0 other; accggatggc cgcgcgattt tttccctccc ctacgtggcg cgctggtgtc cgttcgattc 60 cctctcatct ggtgcccgta cgccctctct cccctggctc aattcaattg agcgcttttt 120 tggagtccgc gaaatgggtt aaccgcaatt tttgaaatcc gcagacattc agtcccttta 180 attgaaatta aaggggttta aattaatatt gtccaataat ttcgcgtggt ttgtctcatc 240 gcacgacgct atcttttgtt ggactggacg agatgtgttg ctgatcgttg gataataata 300 tatattattt atcgtcttta atttgaaaat tgaattattg gtgtgcgtcg tgctgttgta 360 tcccattgta cgatatgtcc gacgtggacc agttaaactg ccactacgga gttaagttga 420 ataaggaatt tatatttaaa ttccctcgtg ttggaggttg atatcaggat catttaccac 480 gtcatatttt gagtagaata tagctattat ttgtttagta ttcattgtat gaacatgttt 540 ccctctaagt atagacgtgg ttggtcgacc aatcagcgaa gaagttacac acgtaactct 600 gtgtttaagc gttcgtatgc ctctaagcgt agtgatgtta aacgtcgacc cagtaatcct 660 aacaagacgc aagaggatag taaaatgaca acgcaacgta tacatgagaa ccagtttggg 720 cctgaatttg ttatgggcca caattcagcc atatcaactt ttatcaccta tccttctctt 780 gtgaaggctg tccccaatcg atcgaggtct tatattaaat taagacgact tcgttttaag 840 ggaactgtga aggtggagcg tgttcatgct gacgtcaaca tggacggttc aaatccaaag 900 atcgaaggag tcttctctct cgtcgtcgtc gtggatcgta aaccacatct tggtacgtcg 960 ggtgctctgc atacgtttga tgagctattc ggtgcaagga tccacagcca tgggaacctc 1020 gcgatagcac cctctttgaa agaccgcttc tacatacgac acgtgtttaa acgtgttctg 1080 tctgtggaga aggataccac gatggtggac ctggaaggga cgacgactct atctactagg 1140 cgttttagtt gctggtcttc gttcaaggac gttgaccgtg agtcatgtaa tggcgtctat 1200 gctaacataa gcaagaacgc cctcttagtt tattactgct ggatgtcgga taatatgtca 1260 aaggcatcta catttgtatc gtttgacctc gattatattg ggtaaattac aaatttaaca 1320 cgagcttaat gcaaatgacc atatttatat tcattaataa atatacatgt ttctctataa 1380 taatctcagt gcaacgattt gggctgagaa ggggtacagt tactgttaat gcattcctgg 1440 gccgtagccc taacaagttc gcttagttgg gccatggaca tggttatgtt cgattgggcc 1500 ctctgagcac ccactattga ggcggagtca cctgggtcta agctgctggt tcccaacctg 1560 tgcagatgcc tgtaagggtg cgtcgcgctc tctatctcgg agtcagcatc cgattgactg 1620 attcctacag tgcttctgac agcccaggac tctccaggtc ttatttcaat tgggttgggc 1680 agcccaacac ccgatatgga tgctgatctg atcatcttcc tctcccattt tccgtagccg 1740 acgtggctaa aatcgatgtc cttctctgag aactgtttgg aaaggatctt caccgttggg 1800 gcacggaaag gtatgtctac agagtgtttc gccgtcgaca gcttcagctt acccttgaat 1860 ttcgcgaagt gggtcctctg gtggacgttg gtgtcgcaca ctctgtagta caatttccat 1920 ggaattgggt ccttgaggga gaagaatgac gaggaaaagt agtggagatc gatgttgcat 1980 ctgatcggaa aagtccacga cgcctgcagc gactcgttgt ctgtcatcct cttgtcatgg 2040 atctccacga cgacggaacc cacggcgtta atgggaacct gctgtctgta ttctatgacg 2100 cagtggtcta ttttcataca actgcgactg agccgtgcgc ttaattggga cgccgttgac 2160 ggaaattgaa gcagaatctc cgtcaggtca tgagaaagct gatattcatc acgctgagac 2220 tcaatgtaat tgaatgcgtt cggaggattc actagttgag attccattgt aattttttta 2280 tcagaaatag gccgcgcagc gggaatgttc aagacaattg aacagctgaa gagaatatgt 2340 ccgaaggact ttagggttta tctcgtttaa gaaaagagta aagtggagac gacgataatg 2400 aagacgagtt gggttgggct attactggac ggattgagag gagatattgt ccaattgagg 2460 tgtttcgttg agcaactcgt ctgattcctc tttaaataga gactgagtac ggagtggcat 2520 atttgtaaat aatgggtgta ccccaattga gagctcgctc tataagtcat atgaattggg 2580 gtaatgggga caatatatag tagaagatcc taaggggctt taagcggcca tccgcactaa 2640 tatt 2644 //