ID HM585437; SV 1; circular; genomic DNA; STD; VRL; 2676 BP. XX AC HM585437; XX DT 16-JAN-2011 (Rel. 107, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Sida micrantha mosaic virus - Rhombifolia [Bolivia:Cerro Fraile 1:2007] DE segment DNA-A, complete sequence. XX KW . XX OS Sida micrantha mosaic virus - Rhombifolia [Bolivia:Cerro Fraile 1:2007] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2676 RX DOI; 10.1007/s00705-010-0876-9. RX PUBMED; 21170729. RA Wyant P.S., Gotthardt D., Schafer B., Krenz B., Jeske H.; RT "The genomes of four novel begomoviruses and a new Sida micrantha mosaic RT virus strain from Bolivian weeds"; RL Arch. Virol. 156(2):347-352(2011). XX RN [2] RP 1-2676 RA Wyant P.S.; RT ; RL Submitted (24-JUN-2010) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX DR MD5; 6902d36b19ecfc642cefaa42e34f55e1. XX FH Key Location/Qualifiers FH FT source 1..2676 FT /organism="Sida micrantha mosaic virus - Rhombifolia FT [Bolivia:Cerro Fraile 1:2007]" FT /segment="DNA-A" FT /host="Sida rhombifolia" FT /strain="SimMV-rho[Bo:CF1:07]" FT /mol_type="genomic DNA" FT /country="Bolivia" FT /lat_lon="18.28 S 63.68 W" FT /collection_date="Nov-2007" FT /db_xref="taxon:932067" FT gene 242..1024 FT /gene="AV1" FT CDS 242..1024 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7CT07" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7CT07" FT /protein_id="ADV15499.1" FT /translation="MHDVRQYFEMPKRDPSWRQMAGTSKVSRNSNFSPRGGGGPKFNKA FT SEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNG FT ITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMF FT DNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGK FT YENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(1021..1419) FT /gene="AC3" FT CDS complement(1021..1419) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:E7CT08" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7CT08" FT /protein_id="ADV15502.1" FT /translation="MDSRTGEFITAPQAENGVYIWEITNPLYFKIYRVEDPPFTRTRVY FT HIQIRFNHNLRKALGLHKAYLNFQVWTTSLTASGKTYLSRFKRLVMKYLDHLGVISLNN FT VIRAVRFATDKAYVNYVLENHVIKFKIY" FT gene complement(1166..1585) FT /gene="AC2" FT CDS complement(1166..1585) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional regulator" FT /db_xref="GOA:E7CT09" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7CT09" FT /protein_id="ADV15501.1" FT /translation="MQHYEVGHSTMLNSSSSTPPSIKPRHRIAKKRTLRRKRVDLKCGC FT SIFVHLNCSGHGFTHRGIHHCTSGREWRLYLGDNKSPVFQDIPRRGPAVHEDQSVPHTD FT KVQPQPQESIGSPQGLPELPSLDDLSDSFWEDLFK" FT gene complement(1476..2552) FT /gene="AC1" FT CDS complement(1476..2552) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:E7CT10" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7CT10" FT /protein_id="ADV15500.1" FT /translation="MPPPKRFKISAKNYFLTYPKCSLTKEETLSQLQSLQIPVNKKFIK FT ICRELHENGEPHIHVLIQFQGKFQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQVDGRSARGVCQTANDAAAEALNAPSKEVALQIIREKLPEKFLFQFH FT NLNSNLDRIFAKAPEPWAPPFRLSSFTNVPDEMQEWADDYFGRGSAARPLRPISLIVEG FT SSRTGKTMWARALGPHNYFSGHLDFNSKVYSDQVDYNVIDDVAPHYLKLKHWKELIGAQ FT QKWQTNCKYGKPRLIEGGVPSIVLCNPGEGASYKDFLDKEENAALRGWTLHNAKFIFLD FT APLYQTETQDCQEENAQA" FT gene complement(2138..2395) FT /gene="AC4" FT CDS complement(2138..2395) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7CT11" FT /protein_id="ADV15503.1" FT /translation="MGSLISTSLSSSKGNSNARITDSSTWYPQPGQHISILTFRELNHR FT PTSSPTSIRTEIPSNGENSRSTAEVLEAFAKQLTTLPQKP" XX SQ Sequence 2676 BP; 665 A; 603 C; 649 G; 759 T; 0 other; accggatggc cgcgcgattt tttccccccc tacgtggcgc gctggtggtc gtgcgatctc 60 cctcccctcc tctcgcgcga cgtggagctc agctgtccgc gcgtttcctc cgcgcgcttt 120 gtctttaatt taaattaaag gaaatatctt tcatccggac caatgaaatt gcgtctttat 180 agcctagata tttgcgtaat acttgggccc gaagttgtta gacggctata aaaattaagt 240 catgcatgac gtcagacaat atttcgaaat gcccaagcgg gatccctcat ggcgccagat 300 ggcgggaacc tcaaaggtta gccgcaatag caacttttcc cctcgtggag gtggaggccc 360 aaaattcaac aaggcctctg aatgggtcaa caggcccatg tataggaagc ccaggattta 420 caggacgctg aggactcctg atgttcctag aggctgtgaa gggccctgta aggtccagtc 480 ctacgagcag cgccatgaca tatcacatgt cgggaaggtc atgtgcatat ctgatgtcac 540 acgtggcaac ggcataaccc accgtgtcgg taagcgtttt tgcgttaagt ctgtgtacat 600 tttagggaag atatggatgg acgagaacat caagctcaag aaccacacga acagtgtcat 660 gttttggttg gttagagatc gtagaccgta tggaactcct atggactttg gccaggtgtt 720 caacatgttt gacaacgagc ccagcactgc tacggttaag aacgatctcc gtgatcgtta 780 tcaagttatg cacaagttct acgccaaggt cactggtggt caatatgcca gcaatgagca 840 ggctctggtc aagaggttct ggaaggtcaa taatcatgtg gtgtacaacc accaggaagc 900 tggcaagtac gagaatcaca cggagaatgc tttgttactg tatatggcat gtactcatgc 960 ctctaaccct gtgtatgcaa cgcttaagat taggatatat ttctacgatt cgataacaaa 1020 ttaataaatt ttgaatttta ttacatgatt ttcaaggaca tagtttacat aggctttgtc 1080 agtggcaaag cgaacagctc taattacatt gttaagtgaa attacaccta aatgatctaa 1140 gtacttcatt acaaggcgct taaacctact taaataagtc ttcccagaag ctgtcagaga 1200 ggtcgtccag acttggaagt tcaggtaggc cttgtggaga cccaatgctt tcctgaggtt 1260 gtggttgaac cttatctgta tgtggtacac tctggtcctc gtgaacggcg ggtcctctac 1320 gcggtatatc ttgaaataca ggggatttgt tatctcccag atatagacgc cattctctgc 1380 ctgaggtgca gtgatgaatt ccccggtgcg tgaatccatg accgctgcag ttcaagtgca 1440 cgaagattga acagccgcac tttaggtcca cccgtttacg cctgagcgtt ctcttcttgg 1500 caatcctgtg tctcggtttg atagaggggg gcgtcgagga agatgaattt agcattgtgg 1560 agtgtccaac ctcgtagtgc tgcattttcc tctttgtcta ggaagtcttt atagctggcc 1620 ccctctccag gattgcatag cacgattgaa gggaccccac cttcaatcaa acgaggcttg 1680 ccgtacttgc agtttgtctg ccatttttgt tgggccccta ttagctcttt ccagtgtttc 1740 aactttaggt aatgcggagc gacgtcatca atgacgttat aatcaacttg atcagaatat 1800 acctttgagt tgaaatccag atggccactg aagtaattat gtgggcctaa tgctctagcc 1860 cacatcgtct tacccgttct gctactacct tcaacaatta aactaatggg cctcaaaggc 1920 cgcgcagcgg aacccctccc aaaataatca tcggcccact cttgcatctc gtctggcacg 1980 ttagtgaatg aggaaagtcg aaagggaggg gcccatggtt ccggagcctt tgcaaagatc 2040 ctatctaaat tactatttag attatgaaat tgaaacagga acttttccgg cagcttctcc 2100 ctgattatct gcaaggctac ttcctttgaa ggggcgttca aggcttctgc ggcagcgtcg 2160 ttagctgttt ggcaaacgcc tctagcactt ctgccgtcga cctggaattc tccccattcg 2220 agggtatctc cgtccttatc gatgtaggac ttgacgtcgg acgatgattt agctccctga 2280 atgttaggat ggaaatgtgc tgacctggtt ggggatacca ggtcgaagaa tctgttattc 2340 gtgcattgga atttcccttg gaactggata aggacgtgga tatgaggctc cccattttcg 2400 tggagctctc tgcaaatttt gatgaacttc ttgtttactg gtatttgtaa gctctgtaat 2460 tgggaaagtg tctcctcttt ggttaaggag cacttgggat atgttaagaa ataatttttg 2520 gcacttattt taaaacgttt gggcggtggc atttttgtaa ataaggcgtg taccccaatt 2580 gagctctcgc tctataagtc atatgaattg gggtaatggg gacaatatat agtagaagat 2640 cctaaggggc tttaagcggc catccgcact aatatt 2676 //