ID HM585431; SV 1; circular; genomic DNA; STD; VRL; 2677 BP. XX AC HM585431; XX DT 16-JAN-2011 (Rel. 107, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Sida micrantha mosaic virus - Rhombifolia DE [Bolivia:Boyuibe-Villamontes:2007] segment DNA-A, complete sequence. XX KW . XX OS Sida micrantha mosaic virus - Rhombifolia OS [Bolivia:Boyuibe-Villamontes:2007] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2677 RX DOI; 10.1007/s00705-010-0876-9. RX PUBMED; 21170729. RA Wyant P.S., Gotthardt D., Schafer B., Krenz B., Jeske H.; RT "The genomes of four novel begomoviruses and a new Sida micrantha mosaic RT virus strain from Bolivian weeds"; RL Arch. Virol. 156(2):347-352(2011). XX RN [2] RP 1-2677 RA Wyant P.S.; RT ; RL Submitted (24-JUN-2010) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX DR MD5; d842174e2017daa35a35de8cca47e773. XX FH Key Location/Qualifiers FH FT source 1..2677 FT /organism="Sida micrantha mosaic virus - Rhombifolia FT [Bolivia:Boyuibe-Villamontes:2007]" FT /segment="DNA-A" FT /host="Sida rhombifolia" FT /strain="SimMV-rho[BoVi07]" FT /mol_type="genomic DNA" FT /country="Bolivia" FT /lat_lon="21.02 S 63.38 W" FT /collection_date="Nov-2007" FT /db_xref="taxon:932064" FT gene 243..1025 FT /gene="AV1" FT CDS 243..1025 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:E7CSY6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E7CSY6" FT /protein_id="ADV15484.1" FT /translation="MNDVRHYFEMPKRDPSWRQMAGTSKVSRTSNFSPRGGGGPKFNKA FT SEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNG FT ITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMF FT DNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGK FT YENHMENALLLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(1022..1420) FT /gene="AC3" FT CDS complement(1022..1420) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="GOA:E7CSY7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7CSY7" FT /protein_id="ADV15487.1" FT /translation="MDSRTGEFITAPQAENGVYIWEIPNPLYFKIYRVEDPPFTRTRVY FT HIQIRFNHNLRRALGLHKAYLNFQVWTTSLTASGKTYLIRFKRLVIKYLDQLGVISLNN FT VIRAVRFATDKAYVNYVLENHAIKFKIY" FT gene complement(1167..1586) FT /gene="AC2" FT CDS complement(1167..1586) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional regulator" FT /db_xref="GOA:E7CSY8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E7CSY8" FT /protein_id="ADV15486.1" FT /translation="MHHCEVGHSTMLNSSSSTPPSIKPRHRIAKKRAIRRRRVDLECGC FT SIFVHLNCSGHGFTHRGIHHCTSGREWRLYLGDTKSPVFQDIPRRGSAVHEDQSVPHTD FT KVQPQPQESIGSPQGLPELPSLDDLSDSFWEDLFN" FT gene complement(1468..2553) FT /gene="AC1" FT CDS complement(1468..2553) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /db_xref="GOA:E7CSY9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E7CSY9" FT /protein_id="ADV15485.1" FT /translation="MPPPKRFKISAKNYFLTYPQCSLTKEETLSQLQSLQIPVNKKFIK FT ICREFHEDGEPHLHVLIQFQGKFQCTNNRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQVDGRSARGGCQTANDAAAEALNAPSKEVALQIIREKLPEKFLFQFH FT NLNSNLDKIFARAPEPWAPPFRLSSFTNVPDEMQEWADDYFGRGSAARPLRPISLIVEG FT GSRTGKTMWARALGPHNYFSGHLDFNSKVYSDQVDYNVIDDVAPHYLKLKHWKELIGAQ FT QKWQTNCKYGKPRLIEGGVPSIVLCNPGEGASYKDFLDKEENASLRGWTLHNAKFIFLD FT APLYQTETQDCQEESNQAQTS" FT gene complement(2139..2396) FT /gene="AC4" FT CDS complement(2139..2396) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7CSZ0" FT /protein_id="ADV15488.1" FT /translation="MGSLISTSLSSSRGNSNARITDSSTWSPQPGQHISILTFRELNHR FT PTSSPTSIRTEIPSNGENSRSTGEVLEAVARQLTTLPQKP" XX SQ Sequence 2677 BP; 665 A; 605 C; 654 G; 753 T; 0 other; accggatggc cgcgcgattt ttcccccccc ccacgtggcg cgctggtggt cgtgcgatct 60 ccctcccccc ctctcgcgcg acgtggagct ctggtgtccg cgcgttcccc ccgcgcgctt 120 agcctttaat tcgaattaaa ggaaataact ttcatccgga ccaatgaaat tgcgtctttt 180 aaagcctaga tatttgcgta atacttgggc tcgaagttgt ttgtgggtta taaaaataag 240 tcatgaatga cgtcagacat tatttcgaaa tgcccaagcg ggatccctca tggcgccaga 300 tggcgggaac ctcaaaggtt agccgcacca gtaacttttc ccctcgtgga ggtggaggcc 360 caaaattcaa caaggcctct gaatgggtaa acaggcccat gtataggaag cccaggatat 420 acaggacgct aaggactcct gatgttccaa gaggctgtga agggccctgt aaggtccagt 480 cctacgagca gcgccatgac atatcacatg tcggaaaggt catgtgcata tctgatgtaa 540 cacgtggcaa cggtataacc caccgtgtcg gtaagcgttt ctgcgttaag tctgtgtaca 600 ttttagggaa gatatggatg gatgagaaca tcaagctcaa gaaccacacg aacagtgtta 660 tgttctggtt ggtcagagac cgtagaccgt atggtactcc tatggacttt ggccaggtgt 720 tcaacatgtt cgacaacgag cccagcactg ctacggtgaa gaacgatctc cgtgatcgtt 780 atcaagttat gcacaagttc tacgccaagg tcactggtgg tcaatatgcc agcaacgagc 840 aggctctggt caagaggttc tggaaggtca acaatcatgt ggtgtacaat caccaagaag 900 ctggcaagta cgagaatcac atggagaatg ctttgttatt gtatatggca tgtactcatg 960 cttctaaccc tgtgtatgca acgcttaaga ttcggatcta tttttacgat tcgataacaa 1020 attaataaat tttgaatttt attgcatgat tttcaagtac atagtttaca taggctttgt 1080 cagtggcaaa gcgaacagct ctaattacat tgttaagcga aattacgcct aattgatcta 1140 agtacttaat tacaagacgc ttaaatctaa ttaaataagt cttcccagaa gctgtcagag 1200 aggtcgtcca gacttggaag ttcaggtagg ccttgtggag acccaatgct ctcctgaggt 1260 tgtggttgaa ccttatctgt atgtggtaca ctctggtcct cgtgaacggc ggatcctcta 1320 cgcggtatat cttgaaatac aggggatttg gtatctccca gatatagacg ccattctctg 1380 cctgaggtgc agtgatgaat tccccggtgc gtgaatccat ggccgctgca gtttaagtgc 1440 acgaatattg aacagccgca ctctaggtca actcgtctgc gcctgattgc tctcttcttg 1500 gcaatcctgt gtctcggttt gatagagggg ggcgtcgagg aagatgaatt tagcattgtg 1560 gagtgtccaa cctcgcagtg atgcattttc ctctttgtct aggaagtctt tatagctggc 1620 cccctctcca ggattgcata gcacgattga agggacccca ccttcaatca aacgaggctt 1680 tccgtatttg cagtttgtct gccatttttg ttgggcccct attagctctt tccagtgttt 1740 caactttagg taatgcggag cgacgtcatc aatgacgtta taatccactt ggtcagaata 1800 tacctttgag ttgaaatcca gatggccact gaagtaatta tgtgggccta atgctctagc 1860 ccacatcgtc ttacccgttc tgctacctcc ttcaacaatt aaacttatgg gcctcaatgg 1920 ccgcgcagcg gaacccctcc caaaataatc atcggcccac tcttgcatct cgtctggcac 1980 gttagtgaat gaggagagtc gaaagggagg ggcccatggt tcaggagccc ttgcaaagat 2040 cttatctaaa ttactattta gattgtgaaa ctgaaataaa aacttttccg gcagtttctc 2100 ccggattatc tgcaaggcta cttcttttga aggggcgttc agggcttctg cggcagcgtc 2160 gttagctgtc tggcaaccgc ctctagcact tctcccgtcg acctggaatt ctccccattc 2220 gagggtatct ccgtccttat cgatgtagga cttgacgtcg gacgatgatt tagctccctg 2280 aatgttagga tggaaatgtg ctgacctggt tggggagacc aggtcgaaga gtctgttatt 2340 cgtgcattgg aatttcccct ggaactggat aaggacgtgg agatgaggct ccccatcttc 2400 gtgaaactcc ctgcaaattt tgatgaactt cttgttaact ggtatttgta agctttgtaa 2460 ttgggaaagt gtctcctctt tggttaagga gcactgggga tatgttaaga aataattttt 2520 ggcacttatt ttaaaacgtt ttggcggtgg catttttgta aataaggggt gtaccccaat 2580 tgagagctcg ctctataagt catatgaatt ggggtaatgg ggacaatata tagtagaaga 2640 tcctaagggg ctttaagcgg ccatccgcac taatatt 2677 //