ID HM585278; SV 1; linear; genomic RNA; STD; VRL; 3816 BP. XX AC HM585278; XX DT 07-MAY-2013 (Rel. 116, Created) DT 07-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Southern rice black-streaked dwarf virus isolate Hubei segment S2, complete DE sequence. XX KW . XX OS Southern rice black-streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3816 RA Zhang S., Wu Z., Wei T., Xie L.; RT "The complete genome sequence of Hubei isolate of Southern rice RT black-streaked dwarf virus, a new member of the genus Fijivirus"; RL Unpublished. XX RN [2] RP 1-3816 RA Zhang S., Wu Z., Wei T., Zhuang J., Xiao D., Lin Q., Xie L.; RT ; RL Submitted (23-JUN-2010) to the INSDC. RL Fujian Agriculture and Forestry University, Key Laboratory of Biopesticide RL and Chemical Biology, Ministry of Education, Kingshan, Fuzhou, Fujian RL 350000, P.R. China XX DR MD5; 155445866228c64abea928bbaa4de994. DR EuropePMC; PMC5549333; 28789694. XX CC GenBank Accession Numbers HM585270-HM585279 represent sequences CC from the 10 segments of Southern rice black-streaked dwarf virus. XX FH Key Location/Qualifiers FH FT source 1..3816 FT /organism="Southern rice black-streaked dwarf virus" FT /segment="S2" FT /host="rice" FT /isolate="Hubei" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:519497" FT CDS 47..3727 FT /codon_start=1 FT /product="P2 protein" FT /db_xref="UniProtKB/TrEMBL:R4HG78" FT /protein_id="AEI59022.1" FT /translation="MNSEENRKKGAKQDEDEKKEPDKTQEAEEPAQEKQESQKSQEKTD FT SVDPDAVINQAGITNSSRPEEIKYKDGSTIQAKTALSVEAIMNIQGHLKQSDQKLVDEQ FT ANQYLTYLTSNVPAYTTTFGITDCADFQLIPFYRSIEFTDDNSQQFPSLFCFNTFVNQY FT YDTDMTTYESKRYFEIFKDHPALLRSSEAFPVNAYKVSVGWNGNSFAPEITDPTVIGDT FT SLIKNVSYVGVHSSDNYKDKKMFSRLKTFLEIAANCNLLLKGCRTKPLSIEYDNTLISK FT KLAGKKILYNDRAHIIFNGIYHSVTPFQKKINDMLMDGNTEIDFDKIYKFGRTIEQTIN FT TYDLICRGYGNTDQFAAYLINLATQRIRDHRMTANHYKTLMAANYPNRVSMHVFDTMID FT DLLFVYCPTEEDWKFSMFVIMIDKNIRSLLMNKSLSLMTSRNLFGQNDIGVKLTTLINN FT KNNSPTSREAVTYFMNVLAGGNIESFCQLLTAEMYARFIDFKVENTYVETEYLDILVLL FT EVLFAFIITPRLAWWNSHRFGRTLFDLMYTFCNDEWNKWEGEFGVFVKLQRGTWNKVNI FT SIDRYDLNDLLDGVVFSFLVQRQYTQKQLSDYPFISSIYNLIAPLGDYVNLTRKINAKY FT PFFETVVRGYLPCSAEDYKEASMINAVNTRVNAIGAAVHLVTKNYFSHNTVKTSVKESY FT NTLLNTIRIASNNLGLLMHYTVAPMLKTMYDSFLFVCDGFDKNSPWKRPRMIAYSGYNV FT LADTGNQNDNLVNLLKGKGITVPLTPLHCFSKLYTYVAIGVHGVCRNDTVTTTGSFLSR FT NFYDPNTINILPFDGQSITELALKVVGHSKRINTVFTIFNYLHKESTSEILSTVRERLS FT AFWTTSNGRAVLHEITRTFNCPVERYFEHENAFYTMDSDPRVYLPTLYASDANGNIDQV FT QPATCAVHKKYQYGDTYLESMLKVISHVTFDDDLPLFRQVEGLAFGYYSTGTSSPADFF FT NVENDTEYFTINLDDHPEVFTTTGTDGFSVQLKFKKDNVDHEYINPLSNAIPKIKFILK FT RLGNMNEHFVIFMKRMIDTRRHMVVLTDVIVDYNIVTLANWKDFKISDENIFNQFVLNR FT DLNNIQLNFYDTRFIIQNRTDELLDRYISLSYRNIAALKDFVVMGGIFGNPNQAIDKLT FT EIDKDVYCFGERNGHTSKYFISKKDKIKGSTVNFNNHFTYLGPQSETRLPILDIRVSSQ FT I" XX SQ Sequence 3816 BP; 1255 A; 657 C; 652 G; 1252 T; 0 other; aaggtttttt accggaccct tggattcacc caaaattaag gacgaaatga attcggagga 60 gaaccgtaaa aaaggcgcta aacaagatga agatgaaaag aaagaaccag ataaaacgca 120 agaagcagaa gaaccagctc aagaaaaaca agaatcacag aaaagtcaag agaaaactga 180 ctcagtcgat cctgacgctg tcattaatca agcaggaatt acaaactcat cacgaccaga 240 agaaattaaa tataaggatg gtagtacaat tcaggctaag accgcacttt cagttgaagc 300 gatcatgaac atacaaggtc atttgaaaca atcagatcaa aaacttgtcg acgaacaagc 360 aaatcagtat cttacatatc ttacttcaaa cgttccagcc tataccacaa catttggcat 420 tacagattgc gctgacttcc aactcatacc tttttatcga tctattgaat ttacagatga 480 taattctcaa caatttcctt cattgttctg ttttaatact ttcgtaaatc aatattatga 540 tactgatatg actacttatg aaagcaaaag atattttgaa atatttaaag atcatcccgc 600 attactacgt tcaagtgaag cttttcccgt taatgcttat aaagttagtg ttggatggaa 660 tggtaatagt ttcgcacctg aaatcactga tcctactgtt attggagata catctttgat 720 aaaaaacgtt tcttatgtag gcgttcacag ctcagacaat tataaagata agaaaatgtt 780 ttcgcgctta aaaacattcc tagaaattgc tgctaattgt aatttattat taaaaggctg 840 ccgtactaaa cccttgtcca tagaatatga taacactttg atttctaaaa agttagcagg 900 aaaaaagatt ctttacaatg acagagcgca catcattttc aatggtatct atcactcagt 960 tactccattc caaaagaaaa ttaatgacat gttgatggat ggtaatactg aaattgactt 1020 tgataaaatt tataaatttg gtcgtacaat tgaacaaact attaatactt atgatttaat 1080 ttgtcgtgga tatggaaaca cagaccaatt tgctgcttat ttgatcaatt tggctacaca 1140 aagaattcgt gatcatagaa tgaccgctaa tcattataag actttgatgg ctgctaatta 1200 tcccaacaga gttagtatgc atgtttttga caccatgatt gacgatttat tgtttgttta 1260 ttgtcctacc gaagaagatt ggaaattcag tatgtttgta attatgatag acaagaacat 1320 caggtctctt cttatgaaca aatcgctatc tttgatgacc tcgagaaatt tatttggaca 1380 aaatgatatt ggagttaagc ttactacttt aattaataac aaaaataata gtcctacttc 1440 tagagaagct gtaacttatt ttatgaacgt gcttgcaggt ggaaacattg aaagtttttg 1500 tcaactctta actgctgaaa tgtatgctag gttcattgat tttaaagttg aaaatactta 1560 cgtcgaaact gaatatttag atattttggt gttgcttgaa gttttatttg ctttcattat 1620 tacacctcgt ttagcttggt ggaacagtca cagatttggt cgtactcttt ttgatttaat 1680 gtatacattt tgtaatgatg aatggaataa atgggaagga gaatttggcg tatttgttaa 1740 acttcaaaga ggaacttgga ataaagtaaa tatttctata gatcgttacg atttaaatga 1800 tttgctagat ggcgtagtgt ttagtttttt agttcaaaga cagtacactc aaaaacaact 1860 ttctgattat ccttttataa gttccattta caatcttatt gctcctttgg gagactatgt 1920 aaatctaacg cgaaaaatta atgctaaata tccatttttt gaaaccgttg ttcgaggtta 1980 ccttccttgc tctgctgaag attacaaaga agctagtatg atcaacgctg tcaacactcg 2040 tgttaacgct atcggagctg ctgttcattt ggttactaag aattatttta gtcataatac 2100 tgtaaaaaca tcagtcaaag aatcttataa tactttgctg aacaccattc gtatcgcctc 2160 taataattta ggactactga tgcattatac tgttgctccc atgctaaaaa cgatgtatga 2220 ttcttttttg ttcgtatgtg atggttttga taagaatagt ccttggaaaa gacctagaat 2280 gattgcttac agcggttaca acgtattggc agatactgga aatcagaatg acaacctcgt 2340 aaatctactt aaaggcaaag gaatcaccgt acccttgact cctcttcatt gtttcagtaa 2400 attgtacact tacgttgcta ttggcgttca tggtgtttgt aggaacgata cagtaacaac 2460 aactggcagt tttttgtctc gtaattttta tgatcccaat acgattaaca tcttgccatt 2520 tgatggtcaa tcgattactg aattagcatt aaaagttgta ggacacagca aacgtatcaa 2580 tactgtcttt acaatattca attatttgca caaagagagc accagtgaga ttttgtcaac 2640 tgttcgcgaa cggctttctg ctttttggac tactagcaat ggaagagcag ttcttcatga 2700 aatcactcgc acattcaatt gccctgtcga acgttatttt gagcacgaga atgcttttta 2760 cactatggat tctgatccta gagtgtatct tccaacttta tatgcttctg atgctaatgg 2820 aaacatcgac caagttcaac ccgctacttg tgctgttcac aaaaaatatc aatacggcga 2880 cacttatcta gaatccatgt tgaaagtgat ttctcatgtg acttttgatg atgacttacc 2940 tttatttcgt caagttgaag gcttagcttt tggttattac agtaccggca catcttcacc 3000 cgcagacttt tttaacgtcg aaaacgacac tgaatatttc actattaatt tagacgatca 3060 tcctgaagtg tttaccacca ctggtacaga cggtttcagt gttcaattga aattcaaaaa 3120 agacaacgtt gatcacgaat acattaatcc actatctaac gctattccta aaataaaatt 3180 tatcttgaag agattaggta atatgaatga acattttgta attttcatga aaagaatgat 3240 tgatactaga agacatatgg tagttctaac cgatgtgatt gttgactata acattgtcac 3300 tttagccaat tggaaagact ttaagataag tgacgagaac atctttaacc aatttgtttt 3360 gaatcgtgat ctgaataaca ttcaactaaa cttttacgat actagattca tcattcaaaa 3420 tcgtactgat gaattgctcg accgttacat tagcttaagt tatcgtaaca ttgccgcttt 3480 aaaagacttc gtagtaatgg gaggtatttt tggtaatcct aaccaggcca ttgacaaatt 3540 gactgagata gataaagacg tatactgttt tggagaacgt aatggtcaca cttcaaagta 3600 ttttatcagt aaaaaagaca agattaaagg aagtaccgtt aactttaaca atcatttcac 3660 ttatcttgga ccacaatctg agactagact gcccattttg gatatcagag tttcatctca 3720 aatttaatta acatctttct ccttcttttt cgatgtgtct agctttttgc ggtgtattct 3780 aatggtcatc cacaaccggt aaaaccagct gatgtc 3816 //