ID HM585276; SV 1; linear; genomic RNA; STD; VRL; 3615 BP. XX AC HM585276; XX DT 07-MAY-2013 (Rel. 116, Created) DT 07-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Southern rice black-streaked dwarf virus isolate Hubei segment S4, complete DE sequence. XX KW . XX OS Southern rice black-streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3615 RA Zhang S., Wu Z., Wei T., Xie L.; RT "The complete genome sequence of Hubei isolate of Southern rice RT black-streaked dwarf virus, a new member of the genus Fijivirus"; RL Unpublished. XX RN [2] RP 1-3615 RA Zhang S., Wu Z., Wei T., Zhuang J., Xiao D., Lin Q., Xie L.; RT ; RL Submitted (23-JUN-2010) to the INSDC. RL Fujian Agriculture and Forestry University, Key Laboratory of Biopesticide RL and Chemical Biology, Ministry of Education, Kingshan, Fuzhou, Fujian RL 350000, P.R. China XX DR MD5; 6f9b0ab64b750544029ec7571c3442c2. DR EuropePMC; PMC5549333; 28789694. XX CC GenBank Accession Numbers HM585270-HM585279 represent sequences CC from the 10 segments of Southern rice black-streaked dwarf virus. XX FH Key Location/Qualifiers FH FT source 1..3615 FT /organism="Southern rice black-streaked dwarf virus" FT /segment="S4" FT /host="rice" FT /isolate="Hubei" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:519497" FT CDS 34..3540 FT /codon_start=1 FT /product="P4 protein" FT /db_xref="UniProtKB/TrEMBL:R4HG93" FT /protein_id="AEI59020.1" FT /translation="MDPVQVIKYLLSQNYETKLQQLEQWQQQMQAAGFTTEYLQRSSNV FT LNIRRRIEESRRRLFEISAKLWQGSLFTKTISPNNLFLGFSECSGVNKSLFDSKNCDFG FT RFSLNFHCIPKYWILSGIFNDLVCYDHHNVKVTVSKSSNKISFRINDFIYIVPTISNFS FT FLSDNPDIKIDENCAFDVFVRIFQSLSDVVLDVCNFTFNDELLNVEWKNTIIRFAGDAN FT YFSVSSNLIFNSIDDYLGRKCTSMRDYFCYAISMNNLEMINDSLNNWESKQLSHKKNLV FT NSLHQMNLNSMIKISSLEKEVARVKTLKISLSYPRTICLHIPTHKLFINKYSHDLFSSV FT FKTQFVGWNFTYGERDRTVEPFICDVETKLKTNSSIVSTASTSHFQCNDFGSPDNMFLL FT NVLDKDGNVKKVICEAVFSLKYKEFKYLGVKSFDEKTGYQSQVYFFGLSEIRLYTENPK FT LQVLSLVSEHEGKLCHVFYATTSLILSFKILAENIEYLGVTSPQFTSEFSYNGKPLKLS FT GKLTLSEEFDGAQTRKCLTSEEFVLNEDVKCVFTSFICNGQRSTTKTFYNNKPWPGIRS FT RYHDNDSYSSAIQATCHTLILNSPFRAYNNYSDILYSANDNVHYVEADGCFTERKNYLY FT WEVPISKFDMIYDDDPCVKLSNKSILTIPVTYRAFFEEVEGKFHPCLLSEVHSIYDYSV FT TQIGDAPELFLPFNKPVDIIYMEQFDGDEVSGELKIISFDVKDFNAYVLPENLNTTMNI FT VGRLLDYESELELVYQTNNVLSDMMNNFEKRLSDLEKFCAFSKKLYKKSGDSSSLYHLL FT GDMFTFVGEICVLQFPILGFCFILTGIMVDAIGKITQEDIFDGISEIAFGGLLLCLGKR FT KPKFAYLQELGLDRRRASSNSYISDLASSIGRRRSYSSYHRYESINELSPSLSIKDRIF FT NQIRAHNPSVFDLHHNSGIILELKQRQKDNYSLLNSSYSRMKRSIGSVSHDDNLNYKLS FT CNNPESCELYELIVTTFDYYPILLNDNSFLIIKVQFKMRITSKPIMMKIEDIMFKYFHT FT SDSLGFNVFDESKYNDVKHLYDYFFRFSFDEIFNYLCVLSLLSKTSSFDNILVENFDKI FT YDTLYLTNHNSYIKNDAIHLRQVDSTIYKTMHGHSFSDQVPNESYFKMISTIVSHPEIL FT RF" XX SQ Sequence 3615 BP; 1189 A; 550 C; 596 G; 1280 T; 0 other; aagtttttat ccatgtcttt gaattgaaca gggatggatc cagtacaagt catcaaatac 60 cttttgtctc aaaattatga aaccaaatta caacaactcg aacaatggca acaacaaatg 120 caagcagcag gcttcacaac agaatactta caacgatctt cgaacgtgct aaacattaga 180 cgcagaattg aagaatctag aaggcgttta ttcgaaatca gtgctaaact atggcaaggt 240 agtctattta ctaaaaccat ttctcctaat aatttatttc tcggcttcag tgaatgctca 300 ggagtgaaca aatcgctttt tgattctaaa aattgtgatt ttggaagatt cagtttaaac 360 tttcattgca tacctaaata ttggatatta tctggaatat ttaatgattt agtttgttat 420 gatcatcata atgtcaaagt cacagtaagc aaatcgtcaa ataaaatatc atttagaata 480 aatgacttta tttacatagt tccaaccata agcaacttct catttttatc tgacaatcca 540 gatatcaaaa ttgatgaaaa ctgcgcattt gacgtatttg tacgaatttt tcaatcatta 600 agcgatgttg ttctagacgt ttgtaatttt acatttaacg atgaattatt gaatgttgaa 660 tggaaaaaca caatcattcg ttttgctggt gatgctaact atttctcagt ttcttcaaac 720 ctcattttca atagtattga cgattattta ggtagaaaat gcacttcaat gagagattat 780 ttttgttacg caattagtat gaataacctg gaaatgatta atgactcctt aaataattgg 840 gaatccaaac aactgtcaca taaaaagaat ttagtaaaca gtcttcatca aatgaatctt 900 aattcaatga ttaaaatttc ttctttggaa aaggaagttg ctagagttaa gacgttaaaa 960 atatccttaa gttatcctcg tacgatttgt ttgcatattc cgacgcataa gctttttatt 1020 aataagtatt ctcatgactt attttcttca gtttttaaaa ctcaatttgt tggttggaat 1080 tttacatatg gtgaaagaga tagaactgtt gaacctttca tttgtgatgt tgaaacaaaa 1140 cttaaaacga attcttctat agtaagtaca gcatcaactt ctcactttca atgtaatgat 1200 tttggcagtc ctgataacat gtttttgcta aatgttttag ataaggacgg taacgttaaa 1260 aaagtaattt gcgaagctgt gttttcattg aagtacaaag agtttaaata tctgggagtt 1320 aaatctttcg atgaaaaaac aggatatcaa agtcaagttt atttctttgg tttgagtgaa 1380 attaggcttt atactgaaaa tccaaagttg caggttcttt cattagtgag tgaacatgaa 1440 ggtaaattat gtcatgtatt ttatgcaact acttctttaa ttttatcttt caaaattctg 1500 gctgaaaata tcgaatattt aggagttacg tctcctcaat tcacaagcga atttagttat 1560 aatggcaaac cattgaaact tagtgggaaa ttaactttaa gtgaggaatt cgatggagct 1620 caaacgagga aatgcttgac ttctgaagaa tttgttttaa acgaagatgt taaatgtgtg 1680 ttcacctcat ttatatgtaa cggtcaacgc tcgacaacca aaacattcta taacaacaaa 1740 ccctggcctg gtattcgtag cagatatcac gataatgatt cttattcaag cgccattcag 1800 gcgacctgtc acactttaat cttaaattca ccttttcgtg cttataataa ttatagtgat 1860 atattatact cggcgaatga taatgtacat tatgttgaag cggatggttg ctttactgaa 1920 aggaagaatt atctctattg ggaagttcca atttcaaagt tcgacatgat ctacgacgat 1980 gatccttgtg ttaagttgtc aaacaaaagc attctcacca ttccagtaac atatcgcgct 2040 ttctttgaag aagtggaagg taaatttcac ccttgtcttt tatctgaagt acattccata 2100 tatgattatt ctgtgactca aattggtgac gctccagaat tatttcttcc tttcaataaa 2160 ccagttgata ttatttacat ggaacagttt gacggggatg aagtcagtgg ggagttaaaa 2220 attatatctt ttgatgttaa agactttaac gcttatgttt tacccgaaaa tctcaatacc 2280 actatgaata ttgtaggaag gttgttagat tatgaatctg aattagagct agtataccag 2340 actaataacg tcttgtccga tatgatgaat aattttgaaa aacgactatc tgatttagaa 2400 aaattttgcg ctttctcgaa aaagttatac aaaaaatcgg gtgattcttc ttctttgtat 2460 catttgttag gtgacatgtt cacttttgtt ggtgaaattt gtgttcttca atttcctatt 2520 ttagggtttt gtttcatttt gactggtata atggttgatg ctattggaaa aattactcag 2580 gaggatatat tcgatgggat tagcgaaatt gcatttggag gcttactact ttgtttaggt 2640 aaaagaaaac ctaaatttgc ataccttcaa gaacttggtt tagatagacg acgtgcttcc 2700 tcgaattctt acattagtga tcttgcatct tctatcggac gtagaagaag ttattctagt 2760 tatcataggt atgaaagcat taatgaattg agtccttctc tttctataaa agaccgaatt 2820 tttaatcaaa ttcgagcaca taatcctagc gtgttcgact tgcatcataa ctcaggtatc 2880 attttagaat taaagcaaag acaaaaagat aattattctc tcttaaactc cagttattcg 2940 cgtatgaaga gatctattgg tagtgtgtct cacgatgata atctcaatta taagttatca 3000 tgtaataatc cagaatcatg tgaattgtat gaactgatag ttactacttt tgattattat 3060 ccaattctat taaatgataa ctctttcctg atcatcaaag tccagtttaa aatgagaatt 3120 acttccaaac ctattatgat gaaaattgaa gacattatgt tcaaatattt tcacactagt 3180 gattctcttg ggtttaacgt ttttgatgaa agtaaatata atgatgttaa acatctttat 3240 gattactttt ttagatttag ttttgatgaa atatttaatt atttgtgtgt cttaagttta 3300 ttatctaaaa caagctcatt tgataatatc ctagttgaga atttcgataa aatttacgac 3360 accctttatc tcacgaatca taattcatac ataaagaacg atgctattca tttacgtcaa 3420 gtcgattcta cgatttataa aaccatgcat ggacattcat tttcagatca agtacctaat 3480 gaaagttatt ttaaaatgat ttcaactata gtttctcatc cagagatttt gagattttaa 3540 ggtactttgg ttagcacgcg gctggtgaaa tctacgaact gttggaattc gacacacatg 3600 ggtacagcta tcgtc 3615 //