Dbfetch
ID HM585271; SV 1; linear; genomic RNA; STD; VRL; 1899 BP. XX AC HM585271; XX DT 07-MAY-2013 (Rel. 116, Created) DT 07-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Southern rice black-streaked dwarf virus isolate Hubei segment S9, complete DE sequence. XX KW . XX OS Southern rice black-streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-1899 RA Zhang S., Wu Z., Wei T., Xie L.; RT "The complete genome sequence of Hubei isolate of Southern rice RT black-streaked dwarf virus, a new member of the genus Fijivirus"; RL Unpublished. XX RN [2] RP 1-1899 RA Zhang S., Wu Z., Wei T., Zhuang J., Xiao D., Lin Q., Xie L.; RT ; RL Submitted (23-JUN-2010) to the INSDC. RL Fujian Agriculture and Forestry University, Key Laboratory of Biopesticide RL and Chemical Biology, Ministry of Education, Kingshan, Fuzhou, Fujian RL 350000, P.R. China XX DR MD5; 821ec4860dda9fc948865f96ef696e4a. DR EuropePMC; PMC4379580; 25807053. DR EuropePMC; PMC5549333; 28789694. XX CC GenBank Accession Numbers HM585270-HM585279 represent sequences CC from the 10 segments of Southern rice black-streaked dwarf virus. XX FH Key Location/Qualifiers FH FT source 1..1899 FT /organism="Southern rice black-streaked dwarf virus" FT /segment="S9" FT /host="rice" FT /isolate="Hubei" FT /mol_type="genomic RNA" FT /country="China" FT /db_xref="taxon:519497" FT CDS 52..1095 FT /codon_start=1 FT /product="S9-1" FT /db_xref="InterPro:IPR009268" FT /db_xref="UniProtKB/TrEMBL:R4HG73" FT /protein_id="AEI59012.1" FT /translation="MADLERRTFGSYKIEELTIRNDQPTRNTNLSLSQSTENRLSTKKI FT PLLDDGIFELLNYLIDGTSFNKTCYCGFNYSHLPNLERDFNIASLYVRENFEICTDQLD FT LANYVRQPNISIKSPDFTVCLEYVLKTVVESESSTKDQKDDESQKPTSTDSTKNEQEKK FT FVEMSLLPLLNRESEESLTEEILEGEGAVVNVLKLFIKGFLMHLGENPNSYDRQLTVEK FT YRPLLVSIVGYEYLVGTTVSEKKINHIYYQLATFDNYPFDLLRFQLSSLISTPTSILER FT ITKEGLFKIITSSTLRSATRQTVLFRGINGSESFLNIKRYRRFRTRIVGNADSVIKSDF FT SSLKLDV" FT CDS 1159..1788 FT /codon_start=1 FT /product="S9-2" FT /db_xref="GOA:R4HGB7" FT /db_xref="InterPro:IPR009650" FT /db_xref="UniProtKB/TrEMBL:R4HGB7" FT /protein_id="AEI59013.1" FT /translation="MNPQSSVNIDTYTFNCPFELAKIQIESVKPIMQDFSDFDEIFERP FT LSDSELDDRVEKLELDIEAKVDPVVRRKYGKVGHIMSMIFSFFFFGIFKLTLKMFYHLF FT RCVCCNPLIRGIFSVVCTVVFYIVIFTLIYLVYFFFGGQILAVYHSLTEMSDSGLINST FT KIEEKVNNIIHEGSLFFGSVDPNTGHFQEVEKQVFNGGTVNYTLFH" XX SQ Sequence 1899 BP; 589 A; 334 C; 323 G; 653 T; 0 other; aagtttttaa gcctggaact gacacattcc tgcaggaacg aacgcaagag aatggcagac 60 ctagagcgta gaacgtttgg atcatataaa atagaagaat tgacaattag aaacgaccaa 120 ccaacaagaa atacaaacct ttcactttct caatcaaccg agaatcgtct ttcaaccaag 180 aaaattcccc tactcgacga cggcattttt gaacttttga actacctcat tgatggaacc 240 agtttcaaca aaacgtgtta ttgtggattt aattattctc atctcccaaa tctagaacgc 300 gactttaaca tcgcttcttt gtatgtacgt gaaaatttcg aaatttgcac agatcaattg 360 gacttggcta actacgttcg acaaccgaac atcagcatta aatctcctga cttcacagtt 420 tgtttggaat acgttttgaa aactgtcgtt gaaagcgaat cctcaactaa agaccaaaag 480 gatgatgaat cacagaaacc cacctccact gattcaacta agaatgagca agaaaagaag 540 tttgttgaaa tgtctttgct tcctctgtta aatcgcgaat ctgaagaatc tttgactgaa 600 gaaattttgg aaggtgaagg cgcagtggta aacgtactta aactattcat taaaggattt 660 ttgatgcatt taggtgagaa tccaaattct tatgatcgtc aactaaccgt tgaaaaatat 720 cgtccattat tggtttctat tgttggctat gaatatctag tcggtactac agtttctgaa 780 aagaaaatca atcacattta ttatcaactt gcaacttttg ataattaccc attcgatctt 840 ttaaggtttc aactttcttc actaatttcc actccaactt caatattgga aagaataaca 900 aaagaaggtt tgtttaaaat tattacatca agcactttgc gaagtgccac acgtcaaact 960 gttttgttca gaggtatcaa cggtagtgag tcatttttga acatcaaaag atatcgtcgt 1020 tttagaacca gaattgttgg taatgctgat agcgttatta agtccgactt ttcttcactt 1080 aaattggacg tctgatactt tacttcttgg tcaatttcat tgtatatcaa tggttgaaga 1140 atttttcttt tctacattat gaacccacag tcttcagtta atattgatac gtataccttc 1200 aactgtccct ttgaattagc aaaaatccaa attgaatccg tgaaaccaat tatgcaagat 1260 tttagtgatt ttgatgaaat ttttgaacgt cctttgtctg attctgaatt ggatgatcga 1320 gttgaaaaat tggaattaga tattgaagcc aaagtcgatc ctgtggtaag aagaaaatac 1380 ggtaaagttg gtcatataat gtcaatgatt tttagctttt ttttctttgg gatttttaaa 1440 ttaacgctta aaatgtttta tcatcttttt cggtgtgtat gttgtaatcc tttaattcga 1500 ggaattttta gtgttgtttg tactgtagtt ttctacatag tcatttttac gcttatttat 1560 ttagtttatt ttttctttgg aggtcaaatc cttgctgtat atcattcttt gaccgagatg 1620 agcgattctg gtttaatcaa ctccaccaaa atcgaagaaa aggttaacaa catcattcac 1680 gaaggttctt tattttttgg ttccgttgat cctaatactg gccactttca agaagtcgaa 1740 aaacaagtgt tcaatggagg tactgtaaat tatactttgt ttcactaagt ttctatttta 1800 tgtgactctg aaaatattca cgctcgtaag tcgattttct tgcagttgtg tatacgctac 1860 ccaacaaatt cgttctcaag ccggcttaca gctgatgtc 1899 //