ID   HM585270; SV 1; linear; genomic RNA; STD; VRL; 1797 BP.
XX
AC   HM585270;
XX
DT   07-MAY-2013 (Rel. 116, Created)
DT   07-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Southern rice black-streaked dwarf virus isolate Hubei segment S10,
DE   complete sequence.
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KW   .
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OS   Southern rice black-streaked dwarf virus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus.
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RN   [1]
RP   1-1797
RA   Zhang S., Wu Z., Wei T., Xie L.;
RT   "The complete genome sequence of Hubei isolate of Southern rice
RT   black-streaked dwarf virus, a new member of the genus Fijivirus";
RL   Unpublished.
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RN   [2]
RP   1-1797
RA   Zhang S., Wu Z., Wei T., Zhuang J., Xiao D., Lin Q., Xie L.;
RT   ;
RL   Submitted (23-JUN-2010) to the INSDC.
RL   Fujian Agriculture and Forestry University, Key Laboratory of Biopesticide
RL   and Chemical Biology, Ministry of Education, Kingshan, Fuzhou, Fujian
RL   350000, P.R. China
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DR   MD5; c11cd99a57df6840d3491dfe60c480b6.
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CC   GenBank Accession Numbers HM585270-HM585279 represent sequences
CC   from the 10 segments of Southern rice black-streaked dwarf virus.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1797
FT                   /organism="Southern rice black-streaked dwarf virus"
FT                   /segment="S10"
FT                   /host="rice"
FT                   /isolate="Hubei"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /db_xref="taxon:519497"
FT   CDS             22..1695
FT                   /codon_start=1
FT                   /product="capsid protein"
FT                   /note="structural protein"
FT                   /db_xref="InterPro:IPR008618"
FT                   /db_xref="UniProtKB/TrEMBL:R4HGK3"
FT                   /protein_id="AEI59011.1"
FT                   /translation="MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNSLFHE
FT                   SNIVKSPHIASSQTTVNLYIRKHLLTRLHDRLQTVETSTLPNITQLKEHIQSYFRNEHQ
FT                   PIFQTLTNNNLSDEFLGVTTFGLSLFATSKLDAEQIERVQIETLTEGNVTLKPFSADGL
FT                   EVILDDSYIGIIGKISGLEVHKLLDKCCREVPAQMGILTDEVKLLIRSGKLRIDGGYDF
FT                   NCPASTTDVTHYGGYDQYSRQMFEKLNLFFNISLSIIPVSALKTIHVFEKELSALDADK
FT                   SLLEQTWSGVSSFIETWKVKTKAKDEDRDEYELTGLSALRKGVDGNSVSSPYNDKKFIE
FT                   WYSKTFAKIEKGSSLRKTEIEDKNTSGTSNITKQVKIHFPVQYFDEVKSNGHEKSVTVI
FT                   TNKGEMSLESYRKIGEILSAIWKRGKALAAPCIDYIKLGVEKAYHLAPVIMKKYNLTID
FT                   DIIHFIEIGPSYLAKLDKIDDWSLIAKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRA
FT                   NNLLKADRDRLIKKATTANSSTSNSNSEHGQKIVLNKVTR"
XX
SQ   Sequence 1797 BP; 614 A; 323 C; 320 G; 540 T; 0 other;
     aagttttttt cctcatccat aatggctgac ataagacttg acatagcgcc cgatcttatc        60
     cataatggtg tgcctcaaag actttcagat acgataattc taaacaaccg accaacaatc       120
     acacttctgt ctcacttcaa ctctcttttt cacgaatcaa atattgttaa atcaccccac       180
     atcgcgtcat ctcagactac agttaattta tacattcgta agcatttgct gactcgactt       240
     catgatagat tacaaactgt cgaaaccagt actctaccga acattactca acttaaagaa       300
     catattcaaa gttattttcg taatgaacat caacctattt tccaaaccct gactaataat       360
     aatcttagtg atgaattttt aggtgtaact acttttggtt taagtttatt cgcaacttcg       420
     aagttggatg cagaacaaat agaacgagta caaatcgaga ccctaactga aggaaatgtt       480
     acacttaaac cattctccgc tgacggttta gaagtaattt tagatgatag ttacatcgga       540
     ataattggaa aaatttctgg tttagaagta cataaattgc tcgataaatg ttgtcgtgaa       600
     gttcctgctc aaatgggaat attaactgac gaagttaaac ttttaatacg ttccggaaaa       660
     ttaagaattg acggtggata cgatttcaat tgtcctgcta gtacaacaga cgtgacacac       720
     tatggcggtt acgaccaata ttcgagacaa atgtttgaaa aattgaattt gttctttaac       780
     atcagtttga gcattattcc tgtttctgca cttaaaacta ttcatgtatt tgagaaagaa       840
     ctaagcgctt tagatgctga caaatcactt ttagaacaaa catggagcgg agtctcctca       900
     tttattgaaa catggaaagt aaaaactaaa gctaaagatg aagatcgaga tgagtacgaa       960
     ctaactggac tgtctgcact tagaaaagga gtcgatggca attctgtatc tagcccttac      1020
     aatgataaga aattcatcga atggtattct aagacgtttg ctaaaataga gaaaggttca      1080
     tcgttgcgta agaccgaaat tgaagacaaa aatacatccg gcacctcaaa cataacaaag      1140
     caagttaaaa ttcattttcc tgttcagtat ttcgatgaag tcaaatctaa cggtcatgaa      1200
     aaaagtgtta ctgtaatcac caataaaggt gaaatgtcat tggaatctta ccgaaagata      1260
     ggtgaaatat taagtgcgat ctggaaacgt ggcaaggcat tagctgctcc ctgcatcgat      1320
     tacatcaaac ttggcgtcga aaaagcttat catttagctc ctgtaatcat gaagaaatat      1380
     aatttaacta ttgatgatat aattcatttt attgaaattg gtccttcata cttagcgaaa      1440
     ttggataaaa ttgatgattg gtccttaatt gcaaaattga ttattaccag tgttttgcca      1500
     aacatcattc aagcggtgta taaaacagat cctagcaata atgttatgaa ttcagttatt      1560
     attagcagag ccaacaattt attgaaggcg gatcgcgatc gtctaattaa gaaagctacc      1620
     actgcaaatt catctaccag taattcaaat tcagaacatg gtcaaaagat tgtgttaaat      1680
     aaagtcacca gatgataatt gaggtttcat cattagcgcg actagttcag tgctgtgtgg      1740
     tcttcagttc attatcgacg ccgagtgacg acggctaggg ggaaagcagc tgatgtc         1797
//