ID   HM566148; SV 1; linear; genomic RNA; STD; VRL; 1790 BP.
XX
AC   HM566148;
XX
DT   03-MAY-2012 (Rel. 112, Created)
DT   03-MAY-2012 (Rel. 112, Last updated, Version 1)
XX
DE   Chagres virus segment S, complete sequence.
XX
KW   .
XX
OS   Chagres virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Phenuiviridae; Phlebovirus; unclassified Phlebovirus.
XX
RN   [1]
RP   1-1790
RA   Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA   Travassos da Rosa A., Lipkin W.;
RT   "Genetic diversity of the Phlebovirus genus";
RL   Unpublished.
XX
RN   [2]
RP   1-1790
RA   Palacios G., Savji N., Sze W., Hutchinson S., Tesh R.,
RA   Travassos da Rosa A., Lipkin W.;
RT   ;
RL   Submitted (19-JUN-2010) to the INSDC.
RL   Center for Infection and Immunity, Columbia University, 722 West 168th
RL   Street, New York City, NY 10032, USA
XX
DR   MD5; 71f7af45ff65edf8d8a0933af17b57c1.
XX
CC   GenBank Accession Numbers HM566146-HM566148 represent the complete
CC   genome of Chagres virus.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1790
FT                   /organism="Chagres virus"
FT                   /segment="S"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:629727"
FT   CDS             60..800
FT                   /codon_start=1
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:I1T326"
FT                   /db_xref="InterPro:IPR009522"
FT                   /db_xref="InterPro:IPR015971"
FT                   /db_xref="UniProtKB/TrEMBL:I1T326"
FT                   /protein_id="AEL29643.1"
FT                   /translation="MANYQDIAVEFAGDLPTEAIIRTWVEEFAYQGFDASQVLRILAER
FT                   GGANWREDAKKMIILSLTRGNKPSKMMERMSEAGKATVSSLMTRYNLKSGNPGRNDLTL
FT                   SRVATALAGWTCQAIPIVQDFLPVTGVVMDGLSPAYPRPMMHPCFAGLIDPSLPKKTVD
FT                   ELVAAFSLYMLQFSKTINPSLRAAKREDIISSFRQPMQAAINSTFLTGAQRRQFLRTLG
FT                   VVNDNLEPSQNVVAAARVFRGTGV"
FT   CDS             complement(956..1756)
FT                   /codon_start=1
FT                   /product="nonstructural protein"
FT                   /db_xref="InterPro:IPR039434"
FT                   /db_xref="UniProtKB/TrEMBL:I1T327"
FT                   /protein_id="AEL29644.1"
FT                   /translation="MNYYATDIPLVSFSACQLRRIQVDYIPFNKQATEPHSNYSGMEFP
FT                   VTSYTQVPGIRSKLQDFYNHNQLPVSWGSGRPGVVNDSSSKYESLIKEISKLELRDVVK
FT                   HNEPNIRRALCWPYSYPTLIFFDLCGNKDSMGPWMFKGAAMTSFMRAGKCAQIDRSLVN
FT                   FHRMIVREAIELGENEAEFTGKDIIMECCSVICRRLLRAYPFDRTYDKPHSRLLTILED
FT                   FDNHFKFDYGESSELRVAVDEFDIHMKRREAEETFWGSDFTDSD"
XX
SQ   Sequence 1790 BP; 462 A; 401 C; 383 G; 544 T; 0 other;
     acacaaagac cctcgaagtc tatacaactt actattatct aaaccacatt ccggaagcca        60
     tggctaacta tcaggacatt gctgttgagt ttgcgggtga tctgcctact gaagctatca       120
     tcagaacctg ggtagaggag tttgcctatc aagggtttga cgcttcccag gtactgagaa       180
     tcttggctga gagaggtgga gctaactggc gtgaggatgc caagaaaatg attattctct       240
     ctctcactag gggcaataaa ccctctaaga tgatggagag aatgtctgag gctggaaagg       300
     caactgtgtc gtcgctaatg actcgctaca accttaaatc tggaaacccc gggaggaatg       360
     atctgactct gtctagagtg gcaactgccc ttgctggatg gacatgtcag gcaattccaa       420
     ttgtccaaga ctttcttcca gttactggtg tagtgatgga cggtctctct cctgcttacc       480
     cgaggccgat gatgcatcct tgctttgcag gactgattga tccgtctttg cccaagaaga       540
     cagttgatga gcttgttgca gcgttcagct tatacatgct tcagttttca aagactataa       600
     atccttctct ccgtgctgct aagagagagg acatcatctc aagcttccgt cagcccatgc       660
     aagcagctat caacagcaca ttcctaactg gtgctcagcg tcgccagttc ttgagaactc       720
     tcggtgtggt caatgacaat cttgagccat ctcagaatgt cgttgccgct gcccgggtct       780
     tcagaggaac tggagtctga gctgctgcca tctccctccc ttatttgtga ttaattggca       840
     ttccattttg tttgttaaat ttaattaata taatttgatt aataatttgt atatagagca       900
     attaggctaa attggggtta aattggcttt aattaaccag gggaaactgg cagtatcaat       960
     cactatctgt gaaatcagaa ccccagaaag tctcttctgc ctctcttctt ttcatatgaa      1020
     tgtcaaactc atctacagca actctcaact ctgagctctc accatagtca aatttaaagt      1080
     gattatcaaa gtcttctaaa atcgttagca atcgtgaatg tggcttgtca taagtcctat      1140
     caaaagggta tgctctaagc aatctcctac atattacact acagcattcc attattatgt      1200
     cctttcctgt aaactcagcc tcattctctc ccaactcaat agcctctcgc actatcatcc      1260
     tgtggaagtt cactaggctt ctatctatct gagcacattt gcctgctcgc ataaaggagg      1320
     tcattgctgc tcccttgaac atccatggcc ccattgaatc tttgttccca cacagatcaa      1380
     agaatattag tgttggatat gagtaaggcc agcaaagggc tctcctgata tttggttcat      1440
     tgtgttttac tacatcgcgc agttcaagtt ttgagatctc ttttattagt gactcatatt      1500
     tacttgacga gtcattgaca actccaggcc tccctgatcc ccatgagact ggtagctggt      1560
     tgtgattgta aaaatcttgt agtttagagc gaattcctgg gacctgtgtg tatgaggtaa      1620
     ctgggaactc catgccagag tagtttgagt gtggttcagt agcctgttta ttgaacggga      1680
     tataatctac ctgaatgcgc cgtaactgac aggctgaaaa tgaaaccaac ggtatgtctg      1740
     tggcatagta gttcattttt aactgatttt cgttcgaggg gtctttgtgt                 1790
//