ID HM566146; SV 1; linear; genomic RNA; STD; VRL; 4398 BP. XX AC HM566146; XX DT 03-MAY-2012 (Rel. 112, Created) DT 03-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Chagres virus segment M, complete sequence. XX KW . XX OS Chagres virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Phenuiviridae; Phlebovirus; unclassified Phlebovirus. XX RN [1] RP 1-4398 RA Palacios G., Savji N., Sze W., Hutchinson S., Tesh R., RA Travassos da Rosa A., Lipkin W.; RT "Genetic diversity of the Phlebovirus genus"; RL Unpublished. XX RN [2] RP 1-4398 RA Palacios G., Savji N., Sze W., Hutchinson S., Tesh R., RA Travassos da Rosa A., Lipkin W.; RT ; RL Submitted (19-JUN-2010) to the INSDC. RL Center for Infection and Immunity, Columbia University, 722 West 168th RL Street, New York City, NY 10032, USA XX DR MD5; c4eda77172946659dcb986768c252636. XX CC GenBank Accession Numbers HM566146-HM566148 represent the complete CC genome of Chagres virus. XX FH Key Location/Qualifiers FH FT source 1..4398 FT /organism="Chagres virus" FT /segment="M" FT /mol_type="genomic RNA" FT /db_xref="taxon:629727" FT CDS 35..3949 FT /codon_start=1 FT /product="glycoprotein" FT /db_xref="GOA:I1T324" FT /db_xref="InterPro:IPR009878" FT /db_xref="InterPro:IPR009879" FT /db_xref="InterPro:IPR010826" FT /db_xref="UniProtKB/TrEMBL:I1T324" FT /protein_id="AEL29641.1" FT /translation="MYIEIVSVMLLASTVYCAYILTASRPKGTTKICLSNLTPYNSLTS FT YWNNLNSDLENGDRQCSVGTSGMSYTTNSTIMSLIREVQISQAHITLTCKPLEAEDEKI FT SMRFDGLADDFHYPSVLNCENSSLSLGPIPNIVPDMGDLIREDANDKIGFLRDRLASME FT ERLVSETKLLEAEREIRNQELNDHSERYHFNDVRLKAHEDDIKDKDDKISEQKHIIAML FT SKNITILHDKLNKMSINPRAEMKVIPTVVSVALLSSSLTSAALSPHIRNRIGDGKYKLE FT DTDEESCRPVTYGSICPGFDLLTRSPHYPFFKSHYFHRSMLEALNDNIITKSDSAICTI FT NSSKGVNCHEEKQYLKMMCPNQFRSAHYLDLKGKIRAVKCEEGYELTEDCFHCRKIKPD FT TGKPLWKSSIALQDVVCQQGASTYSGPIVSPKEYCSIGGKKYKKCDSHSTKIETVPFVT FT FQSVGKMYLESLQVRNTETMSKESFICYDHMGQVNGQSTGQADSRLLKKFDISKCKNVD FT DTKSDICSGDELFCSAFQCSGENPVAQCIIAPGSGPLEVNINGVWLKPICVGFEKTIVK FT KENKRQVINQQSSCSNCLTSCLQEGILVRSTGFKMISAVACSHGSCSSVAQQPSTEIMI FT PYPGMMASAGGTVGIHVSHDDNSVSAKLSASCPPQDQCKAHSCSFCVEAIINYQCHSLI FT SGFMVFCFVFSLLLMVVILIINILKALRVSPKVLKKPLLWVLALLRWMASRILLFFHVR FT LVDLNQQIGWNGEVVVEQARPGRITRYMYTVGLLMSLITLVTPCSEVAVASSKMTRCST FT KGSKTTCKVSGSVLLRAGVIGSEACLLIKGHSDTQKTLLSIRTESSEIVCREGQSFWTG FT QFVSKCMSSRRCHGVGECIDQMCQEWKQNVTSSEFSSISKNERMSENVCIEQCGGLGCS FT CFNINPSCLFVHAELMSTRKEAVRVFNCIDWVHKLNFVVTDAQGQSEKVSLGSMSSKMF FT KWGTMTLSLDAEAITGSNSLLFMQNHNGGFALSDEQFSDIAREGYIGEIRCSSESAVIS FT AHSSCKRAPNLIKYRPILDIAECSTNLIDPFSMFLRGSLPQTRNGKTFTATKDSKSVQA FT LANAQINAQISLNIDDYDIEFKEDAPSCEAVFLNVSGCYSCNLGAQVCIKVSISEQGVF FT HAHSADNVVQIGFHVLASRKEYCQIVHFDSPHIDISLMYSCGLDERPIELKGSLIAIMP FT YDLRNNTVGASTVVNPRQGSWSFSNWAGGLISWIGGPLKSIFLIMVYIVASILGILVFL FT YISKRLISSAIMKLIARKTK" XX SQ Sequence 4398 BP; 1406 A; 885 C; 958 G; 1149 T; 0 other; acacaaagtc ggtgcaaatt tttctgaatt caaaatgtat atcgagattg tttcagttat 60 gcttttagca tcaacagtct actgtgctta tattcttact gcttcacgac ccaaagggac 120 gactaagata tgcctcagca acttgactcc ttacaattct ctaacctctt attggaataa 180 cttaaattca gatcttgaaa atggcgatag acaatgcagt gttggaacca gtggcatgtc 240 atatacgact aattccacga ttatgtcact gatcagggaa gtgcagattt ctcaagctca 300 catcactctg acctgtaagc cattagaggc tgaagatgag aaaatatcga tgagatttga 360 tggccttgca gatgattttc attatccatc tgtgctaaac tgtgagaact cttccttgag 420 tcttggccca atccctaata ttgtgccaga tatgggagac ctgataagag aggatgctaa 480 tgacaaaatt gggtttctca gagacaggct agctagcatg gaagaaagac tcgtatctga 540 aacaaagctc ctggaggcag agagagaaat aagaaaccaa gaattgaatg accacagtga 600 gagatatcat ttcaatgacg ttcgtctaaa ggcccatgag gatgacataa aagataagga 660 tgataaaatc tcagaacaaa aacatattat agctatgctc agcaagaaca taactatcct 720 gcatgacaag ctcaacaaga tgtccataaa tccacgagca gaaatgaagg tcattccaac 780 tgttgtctca gttgctcttc tctcatcatc actcactagt gctgctcttt cgccacatat 840 aagaaatcgg attggcgatg gaaaatacaa gcttgaggac acagatgaag aaagttgtag 900 accagtcact tatggctcaa tatgtccagg ctttgacttg ctcacgagaa gcccgcacta 960 tccttttttt aaatcacact actttcacag aagtatgcta gaggccctta atgacaatat 1020 catcaccaaa tctgattctg caatctgcac tatcaattcc tcaaaagggg tgaattgtca 1080 tgaggagaaa caatatctca agatgatgtg tcctaatcaa ttcagatctg ctcattactt 1140 ggacttgaag ggcaagatca gagctgtcaa atgtgaagaa ggctatgaac tcactgagga 1200 ctgcttccac tgccggaaga ttaagccaga tacagggaag cctttatgga agtcctcaat 1260 cgcactacaa gatgtagtat gtcagcaggg agcaagcact tactcaggcc caattgtttc 1320 tcccaaagaa tattgctcaa ttggtggaaa gaaatacaaa aagtgcgatt ctcactcaac 1380 aaaaattgaa actgtgcctt ttgtaacatt ccaatcagta gggaagatgt acttagagtc 1440 actccaggtg aggaatacag agacaatgtc aaaagagtct tttatatgtt atgatcacat 1500 gggtcaagtg aacgggcaga gcactggtca agctgattct agactgctta agaaatttga 1560 catatcaaag tgcaagaatg tcgatgacac aaagtctgac atctgttcgg gtgatgagct 1620 cttttgttca gcatttcaat gctcaggaga aaatcctgtt gctcagtgca taatagcacc 1680 aggatctgga ccactggagg tgaatatcaa cggtgtgtgg ctaaagccca tctgtgttgg 1740 ttttgagaaa actatagtta agaaggagaa taagagacag gttattaacc agcaatcatc 1800 atgcagtaat tgtctgacaa gctgcctcca ggagggcata ctagtcagaa gcacagggtt 1860 caagatgata tctgcagttg catgttcaca tggctcttgc tcgtctgtcg cccagcagcc 1920 atctactgaa atcatgatac cttatccagg aatgatggcc tctgctggcg gaactgttgg 1980 gattcatgtg tctcatgatg ataactcagt gagtgccaag ctgtctgcat cctgtcctcc 2040 acaagatcag tgcaaggctc actcatgctc attctgcgtt gaggcaatta tcaattacca 2100 gtgtcatagc ctaataagtg gatttatggt tttctgcttt gtctttagtc tcctcttgat 2160 ggtggttatc ctaataatta atatcctcaa ggctctgaga gtgagtccaa aggtgctcaa 2220 gaagccccta ctgtgggtct tagccctact caggtggatg gcctccagaa tactgctatt 2280 cttccatgtt agacttgtgg atttgaatca gcaaataggt tggaatggag aagtagtggt 2340 tgaacaagca cgtcctggga gaataacaag atacatgtac acagttggtc ttctaatgtc 2400 gctgataaca ctggtaacgc catgctctga ggtggctgtg gcaagctcaa aaatgacaag 2460 gtgcagcaca aaaggtagca agacaacatg caaagtctca ggatcagtgc tgttgagagc 2520 tggtgttatt ggatcagaag cttgcctcct cattaaaggg cactcagaca ctcaaaagac 2580 attactctca ataagaacag aatcaagcga gatagtatgc agagagggac agagcttctg 2640 gactggtcaa tttgtctcta aatgtatgag ctcaaggaga tgccatggtg taggtgagtg 2700 cattgatcag atgtgtcaag aatggaagca aaatgtgaca tcttctgaat tttcttctat 2760 atctaaaaat gagaggatgt ctgagaatgt atgtatagag cagtgtgggg ggctgggttg 2820 cagttgcttc aacataaatc cctcttgctt gtttgtacat gcagagctca tgtctaccag 2880 gaaagaggct gttcgcgtgt ttaactgtat agactgggtt cacaagctca attttgtggt 2940 cacagatgca caaggccaat ctgaaaaggt gtccctgggc tcaatgagct ccaagatgtt 3000 caaatggggc acaatgacac tgtccttgga tgccgaagca attacgggct caaatagcct 3060 tctttttatg caaaatcata atgggggttt tgctttgtct gatgagcagt tctctgatat 3120 tgcgagagaa ggctatattg gtgagatacg atgcagttca gagtctgctg tgatatctgc 3180 tcattcatca tgcaagagag cacctaatct catcaaatac aggcccatac ttgatattgc 3240 tgagtgctca actaacttaa ttgatccatt cagcatgttc ctgcgaggat cacttcctca 3300 gaccagaaat ggaaagacat tcacggcaac taaagactca aagtctgtcc aggcccttgc 3360 aaatgcacag ataaatgcac agatttcctt gaacattgat gactacgata ttgagtttaa 3420 agaagatgca ccaagttgtg aagcagtgtt cctaaatgtt agtggatgct attcctgcaa 3480 cctgggagca caagtttgca ttaaggtgtc aatatcagaa caaggagtat tccatgctca 3540 cagtgcagac aatgtagttc agataggatt tcatgtgtta gcatccagga aggaatattg 3600 ccagatagtg cactttgatt cacctcatat tgatatatcc ttgatgtata gttgtggcct 3660 agatgagaga ccaatagaac tgaagggttc attaatagcc attatgcctt acgacctccg 3720 aaataacaca gttggtgcct caacagtggt aaaccctaga caaggctcat ggtccttctc 3780 caactgggca ggagggctaa tcagctggat tggtggacct ctcaaatcaa tattcctcat 3840 catggtgtat attgtagcat cgatcttggg tatccttgtg ttcttgtaca tatccaagag 3900 gctaataagt tctgcaataa tgaagctcat agcccgcaag acaaagtaag agcaaagcca 3960 tggagaggca gctcaccaac ccaaaacaac aacacaataa gcaaatagaa ataaaatgaa 4020 acaattcaaa acaacaacaa aagaacacag aacaaacaat acaaaggtaa agaaaactaa 4080 aaaacagaga caaaacaaaa accaacacac aaacatgaca aaacaatcgg agaacaagca 4140 gtacagaaaa gaccaaaaac accacagact caaaagacaa acacaacaca caagaccaga 4200 acacacaacc attggcagca ctagccagta caataacatt gacaagttac aaagttgaga 4260 gcaatctttg ctgggttaag acgagagagt gacattcact gtgggacctc atgattctag 4320 aatgtgtgta tgtgacaagc atatgctaca tcatgaaagg gattttatta tatcatttag 4380 tagcaccggt ctttgtgt 4398 //