ID HM565953; SV 1; linear; genomic RNA; STD; VRL; 2290 BP. XX AC HM565953; XX DT 27-AUG-2010 (Rel. 105, Created) DT 26-NOV-2013 (Rel. 119, Last updated, Version 3) XX DE Heterobasidion partitivirus 2 isolate HetRV2-pa1 putative RNA-dependent RNA DE polymerase gene, complete cds. XX KW . XX OS Heterobasidion partitivirus 2 OC Viruses; Riboviria; Partitiviridae; Betapartitivirus. XX RN [1] RP 1-2290 RX DOI; 10.1007/s00705-010-0823-9. RX PUBMED; 20922436. RA Vainio E.J., Kerio S., Hantula J.; RT "Description of a new putative virus infecting the conifer pathogenic RT fungus Heterobasidion parviporum with resemblance to Heterobasidion annosum RT P-type partitivirus"; RL Arch. Virol. 156(1):79-86(2011). XX RN [2] RP 1-2290 RA Vainio E., Hantula J., Kerio S.; RT ; RL Submitted (19-JUN-2010) to the INSDC. RL Forest Pathology, Finnish Forest Research Institute, Jokiniemenkuja 1 POB RL 18, Vantaa 01301, Finland XX DR MD5; ef8404c01f4f869e60f3ebd1c6f93a44. DR EuropePMC; PMC6255973; 30515186. XX FH Key Location/Qualifiers FH FT source 1..2290 FT /organism="Heterobasidion partitivirus 2" FT /host="Heterobasidion parviporum isolate 7R18" FT /isolate="HetRV2-pa1" FT /mol_type="genomic RNA" FT /country="Finland" FT /isolation_source="Picea abies wood" FT /collected_by="T. Piri" FT /collection_date="2005" FT /db_xref="taxon:872291" FT CDS 65..2233 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase" FT /db_xref="GOA:E1AB81" FT /db_xref="UniProtKB/TrEMBL:E1AB81" FT /protein_id="ADL66905.1" FT /translation="MSTNPPEVLLPLPEVDPNANNVRYAKLLDQYRANPSNSNQKLLLE FT YAEQHGFNYFIPTDVPLPDDRKSAPGILSLDGFRFHTVAAFHRYQKMSRYGYNALGFIF FT KLILTLFNPFLWILTDYCRPSGSADAVFENFNQEVSPVEHVNPSRLAQIMPLIHHFFAI FT KPFCPIAFPDLRFYKWSLVTSADYHAHHSKDQQDESAHYWKHLKDSDLLQDRFDYSDRP FT RSKGYFFNTVLLSTRTIVHNIKYHCLPFQRHKRDTDSSVLQKLSFWFMKYPTVMYVRSQ FT ISKLSKLKVRPVYNAPFLFILIEAMLTLALMAQCRLPDSCLMWGFETVRGGMQELNRIS FT YNYDTFIMIDWSRYDQLLPFAIIYHFWCTFLPQLIRVDLGYMPTEQYTATQHKHAFTEK FT HNDQKESNPEYATFASRLKTHAPHIVMFSFIIFNLLAFIWLWYVKMVFVTPDGFGYVRL FT LAGVPSGIFMTQICDSFCNAFLLIDAMLEFGFTPDDIKLIRMFIQGDDNVIFYLGDFTR FT IFAFYEWLPEYCQQRWHMTISVDKSSITRLRNKIEVLGYTNLNGMPHRDCAKLIATLAY FT PERYVQDKTKYIVFMSRAIGIAYANAGHDRQVHDLCQRAYLQARKDSGLSYDELKNIKI FT EYQKLGFYEIFSVNIEELREHLIQDVSEFPNFHDIRDNLRHWHGPHTVYPMWPRHFDDD FT LSSIKSPHSLTTLYDVMQSGGLTFDYNF" XX SQ Sequence 2290 BP; 621 A; 682 C; 362 G; 625 T; 0 other; gaacaaggct catacgttaa ccctacaagt tcacgcaatc ctatcgtttt ccctgaccct 60 cagcatgtcg accaaccctc ctgaagtact ccttccctta ccagaggtag atcccaacgc 120 caacaatgtt cgctacgcaa agctccttga ccaatatcga gctaaccctt cgaactccaa 180 tcagaaactc ctcctcgagt acgctgaaca acatggcttc aactacttca tcccaacgga 240 tgtcccactt cccgacgacc gcaaatccgc tccaggtatt ctatccctag acggttttcg 300 cttccacact gtcgcagctt tccacagata tcaaaagatg tcacgctacg gatacaacgc 360 ccttggcttt atcttcaagc ttattttgac gcttttcaac ccatttctct ggattctcac 420 cgactattgt cgaccctccg gctccgccga cgcagtattc gaaaacttca accaagaagt 480 ttcacctgtc gagcacgtca acccttcccg cctcgcacaa attatgccac tgattcacca 540 cttcttcgca atcaagcctt tctgtccgat cgccttccct gacctccgct tttacaagtg 600 gtccctcgtt acttccgccg actaccatgc ccatcacagt aaagatcagc aagatgaatc 660 tgcccactac tggaaacacc tcaaagacag cgatctcctt caagatcgat ttgactactc 720 cgatcgccct cgatccaaag gttatttctt caacacagtc ctactttcta cacgtacaat 780 cgttcacaac atcaagtatc actgtctacc cttccaacgc cataaaagag acacagactc 840 ctcagtcctt caaaaactct cattctggtt catgaaatat cccacagtca tgtatgtccg 900 ctcccaaatt tccaagcttt ctaagctcaa agtcagaccc gtctacaacg ctcccttcct 960 gttcattctc atcgaagcaa tgctcacgct tgctctcatg gcacaatgtc gccttcccga 1020 ctcttgtctc atgtggggat ttgaaacagt acgcggtggt atgcaagaac tcaatcgtat 1080 atcatacaat tatgacactt ttatcatgat tgactggtcc cgatatgatc aacttctacc 1140 tttcgctatc atttaccact tttggtgcac tttccttcca caactcattc gtgttgacct 1200 cggctatatg cccacggaac aatacacagc tacgcaacac aaacatgcgt ttactgaaaa 1260 acacaatgac cagaaagaat ccaatccgga atatgctact ttcgcttcac gcctcaaaac 1320 tcatgcacct cacattgtta tgttttcctt catcattttc aacctcctcg ccttcatttg 1380 gctctggtac gtcaaaatgg ttttcgtcac tcctgacggc ttcggctacg tccgccttct 1440 cgctggtgta ccctctggaa tattcatgac acaaatatgt gactcattct gtaacgcttt 1500 ccttctcatc gatgcaatgc ttgaattcgg tttcacaccc gatgacatca agctcatccg 1560 tatgttcatt caaggagatg acaatgtcat cttttacctt ggtgatttca cccggatctt 1620 cgcattttat gaatggcttc cagaatactg tcagcaacgc tggcacatga ctatctccgt 1680 cgataaatca agtatcactc gtcttcgcaa caagattgaa gtccttggtt acaccaacct 1740 caacggtatg ccccatcgtg attgcgccaa actcattgcc actctcgctt accccgaaag 1800 atacgtacaa gacaaaacca agtacattgt gtttatgtca cgcgccatcg gtatcgctta 1860 cgcgaacgct ggacacgaca gacaagtcca tgacttgtgt caacgtgcat atcttcaagc 1920 aagaaaagat tcaggtctca gttatgatga actcaaaaac atcaaaattg aataccagaa 1980 acttggcttc tacgagattt tctccgtcaa tatcgaagaa cttcgcgaac atctaatcca 2040 agatgtgtct gaattcccaa attttcatga cattcgtgat aacctccgac actggcacgg 2100 ccctcacacc gtctatccaa tgtggccccg ccactttgat gatgacctca gctctattaa 2160 gagcccacat tccctaacaa ccctgtatga tgttatgcag tctggtggtt tgacatttga 2220 ctacaacttt tagttgctag tccatgcctc caccctcaaa aaaaaaaaaa aaaaaaaaaa 2280 aaaaaaaatc 2290 //