ID HM543465; SV 1; linear; genomic RNA; STD; VRL; 3897 BP. XX AC HM543465; XX DT 13-SEP-2010 (Rel. 106, Created) DT 19-NOV-2010 (Rel. 106, Last updated, Version 2) XX DE Great Island virus isolate CanAr 42 segment 1, complete sequence. XX KW . XX OS Great Island virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-3897 RX DOI; 10.1099/vir.0.024760-0. RX PUBMED; 20739272. RA Belhouchet M., Mohd Jaafar F., Tesh R.B., Grimes J., Maan S., RA Mertens P.P.C., Attoui H.; RT "Complete sequence of Great Island virus and comparison with the T2 and RT outer-capsid proteins of Kemerovo, Lipovnik and Tribec viruses (genus RT Orbivirus, family Reoviridae)"; RL J. Gen. Virol. 91(Pt 12):2985-2993(2010). XX RN [2] RP 1-3897 RA Belhouchet M., Mohd Jaafar F., Mertens P.P.C., Attoui H.; RT ; RL Submitted (14-JUN-2010) to the INSDC. RL Vector-Borne Diseases, Institute for Animal Health, Ash Road, Woking, RL Surrey GU24 0NF, United Kingdom XX DR MD5; f814a70986553a9efcdd8baf7295a342. XX FH Key Location/Qualifiers FH FT source 1..3897 FT /organism="Great Island virus" FT /segment="1" FT /isolate="CanAr 42" FT /mol_type="genomic RNA" FT /country="Canada" FT /db_xref="taxon:204269" FT CDS 12..3869 FT /codon_start=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:E1AA89" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/TrEMBL:E1AA89" FT /protein_id="ADM88592.1" FT /translation="MAAVEQRITSARSALRRIFNHKLFTQTQRCYEYYKFSQWQHSENE FT KRGYLYTVPVVRENGWQEIPRCVGARPRDALDVYYRSIQPISRIQPEEEFLRNYALDDG FT MESDLYRFMQHRAREEMAVYGDMALRHWYALVQQLADDFGIVPLGLSCMERFIDENGDP FT FHQSTRDLSKISDEVRSSSVVLLFEMSICEALLEYNVTLRSRESNITPTVRVGRLEIDR FT IEIIRELYTLMLPHPKKICNMLRASYSWFVKNWGIAASEVTLLESTAGDDRNSKDVTYQ FT RWRRIRNPYRDIILGTRFHRESLAANLKKVDEAVEYARSLANTPVSLSLFRTLMHDTYT FT QEFDPQNQGHVQLASLLLAVQTMAGYGRAWVVNASDDPERMLQPTKDNFVERVSRETER FT FFVNAYEEARVHGFDIIPPEDMYTSLLRLAKNTSSGFSTEVEVRKSYGPKAARREELVR FT VRSRQKALYLLREGHNIYSPHMMQMRYDSPECFQTRGTRDVPIKATRTIYAINVNVLAP FT QHILTLPLNEYFARAGGPTHPSVASIGGKVIIGDLEATGSRVMDAADTFRNTADSAIWT FT LALDYSNYDTHMTQHNFRRGMIAGIRSAIARHHALRYGQWDVFQLLEAGYGEGRVANTL FT WNGKRRVLRMDATAYEALPEAERTVPPDAPFRFRPPGTHPIRTLSLAAPATGNNVVLVV FT PWDGSDLARVSTHLSGENSTLVANSLHNMAMGRVIQDEVQARAPGVFEVLSEMYVGDDT FT LHYIRMLTLRPEHVDRAIDVIFKTIELCGHEASASKTTFAPFSAEKTQTHAKQGIYIPQ FT DRMMIISSERRKEIENVAGYMRAQVTTFVTKVSRGFSEDLAHRILLFKSALVGYRRMKA FT TIREGSVYRRRNFHSHEDGYTLCRVYDPTILYAPIDSGGYGVHPFALNVVQTRELHLDS FT QQLFPVYRDLVARRVIMDAFPPSWNESDVDTRLISTKTPMGLFSKIVRQTPRLALTDPE FT LMALVDQLPLGEHSPTRLSSTMMRGALLKEPRARTLLSPAYEEQFSKTLSSWREPVEFS FT PIGQHEVTSAYAKVLDLRVEKREAPIPFFPDQNLSPGFLAQKMYVGHRTTTRPLRSYVD FT QIDRILRGDTVMRGILTSSAIMSLLEKIGFDHDPTDLATVFELLNLEPRVARRLAEFVT FT SDRLRFDVHLLNRRGIGGDEFSMSLDVCTEGSRDERIDCPPEFTPVERDAVSLHGEQIQ FT MLYASHFGSSCRVVFQVRPEHRSALRRIRVKMRAPRQRIVRSASRAVRSASQALAEGQF FT L" XX SQ Sequence 3897 BP; 898 A; 1098 C; 1081 G; 820 T; 0 other; gtaaatatgt catggctgcg gtggagcagc ggatcacctc agcgagatca gcactacgac 60 gcattttcaa ccacaaactg ttcacccaaa cgcaaagatg ttatgaatac tacaaatttt 120 cacagtggca gcattcggag aatgagaagc gcggatatct atacaccgtc ccagttgtgc 180 gagaaaacgg atggcaggag ataccgagat gcgttggcgc acgccctcga gatgccctcg 240 acgtctatta ccgttccata caaccgatca gtcggataca gccagaggaa gagtttctgc 300 gtaactacgc gttagacgac gggatggagt ctgacctata ccgcttcatg cagcaccgag 360 cgcgtgagga aatggcggtt tatggtgaca tggcgttgcg ccactggtat gcgttggtgc 420 aacaactcgc ggatgatttt gggatcgttc cgctaggatt gtcgtgcatg gagaggttta 480 ttgacgaaaa cggagacccg ttccaccaga gtacgcgaga cctctcgaaa atctcagacg 540 aggtgaggtc tagttcagtc gtcctgctct ttgagatgtc gatatgtgag gcgctgctgg 600 agtacaatgt cacgttgcgc tcccgagagt cgaatatcac acccacagtg cgtgtcggcc 660 gacttgaaat cgatcggatc gaaatcattc gcgagttgta cacacttatg ttgccacacc 720 ccaagaagat ttgcaacatg ctgcgggcga gctactcctg gttcgtaaag aattggggga 780 ttgctgcctc cgaagttacg ttgctagaat cgacggctgg ggacgacagg aactcaaagg 840 atgtcacata tcaaagatgg cggaggatcc gaaaccctta ccgtgatatc atacttggga 900 ccaggttcca tcgcgaatca ctcgccgcga acctcaagaa agttgacgag gcggtcgagt 960 acgctcgtag cttagcaaac accccggttt ctctgtctct atttcggacc ctgatgcatg 1020 atacctatac ccaggagttc gacccgcaga accagggcca cgtgcaactg gccagcctgc 1080 ttctggcggt gcagacgatg gctggctatg gacgggcgtg ggtggtcaat gcgagcgatg 1140 atcccgagag gatgctacag ccgacgaaag acaacttcgt tgaacgcgtg tcgagagaga 1200 cagaacgttt tttcgttaac gcctatgagg aggcgagagt ccacggcttc gatatcattc 1260 ccccggagga catgtacacc tcactgctgc gcttggccaa gaacacgtct tccggcttct 1320 cgacggaagt tgaagttagg aaatcgtatg gacctaaagc ggcacgtcgg gaggagctag 1380 tgcgagtacg gtcacggcag aaggctctat acttgttgcg agagggacat aacatctact 1440 ccccacacat gatgcaaatg cggtacgact cgcccgagtg tttccagaca cgcggtacac 1500 gcgatgtccc gatcaaggcg actagaacta tttacgcgat caacgtcaac gtgctcgctc 1560 cacaacatat actaacgctt cccttgaatg aatacttcgc gcgcgcgggc ggaccaacac 1620 acccttcggt tgcgtcaatc ggtggtaagg tcatcatcgg cgacctggaa gcgacgggtt 1680 ctcgggtgat ggatgccgca gatacattca ggaacaccgc ggattctgcg atctggacgc 1740 tcgccctcga ctactcaaat tacgacacgc acatgacaca gcacaacttc cggcgtggaa 1800 tgatcgcggg cattcgaagc gctatcgcgc gacaccacgc attacggtat ggacagtggg 1860 acgtcttcca attgctcgag gcgggctatg gtgaggggcg cgtagcgaac actctatgga 1920 atgggaagcg acgggtcctt cggatggacg cgacggctta cgaggcattg cctgaggcgg 1980 agcggacggt ccccccagac gcaccattcc gcttccggcc ccccgggact cacccaattc 2040 gtacactttc gcttgccgca cccgcaaccg gtaacaacgt cgttctcgtt gtgccgtggg 2100 atgggtcaga cttagcgcgc gtttctacgc acctttcagg ggagaactca acattagtgg 2160 cgaattcgtt gcataacatg gctatgggtc gcgtcatcca ggacgaggtt caggcgaggg 2220 ctcccggggt ttttgaggtc ctttccgaga tgtacgtggg cgacgacacg cttcactata 2280 ttcgcatgct tacgctaagg cccgagcacg tcgaccgcgc gatcgatgtc attttcaaga 2340 caatcgagct atgtggacac gaggcttcgg cgtccaagac aacgttcgcg cccttttccg 2400 cggaaaagac ccagacgcac gcgaagcaag gcatttacat tccgcaggac agaatgatga 2460 ttatctcctc ggagcgccga aaggagatcg aaaatgtggc agggtacatg cgagcgcagg 2520 tcaccacctt cgtcacgaag gtcagccgcg gcttcagcga ggatctcgcg catcgcattc 2580 tgctcttcaa atccgctctc gtcgggtatc gacgcatgaa agccaccatc agggagggaa 2640 gcgtctaccg tcgccgcaac ttccactccc atgaagacgg gtacacgtta tgccgtgtgt 2700 acgaccccac aattctttac gcacccattg attcgggcgg gtatggcgta caccccttcg 2760 ccctaaacgt cgtccagaca cgggaactcc acctcgactc tcagcagctg ttccctgtgt 2820 accgggacct cgtcgcgcgc cgggttataa tggacgcatt cccaccctcc tggaacgaaa 2880 gcgatgtgga cacgcgactc atatcgacaa agacgccaat ggggctgttc tctaagatcg 2940 tccgccaaac gcctcgcctc gccctaacgg accccgagct catggcccta gtcgaccagc 3000 ttcccctagg agagcactcc ccgactcgtc tgtcgtcgac catgatgcgg ggcgccctgc 3060 tgaaagagcc cagagcacga acgcttctct ctccggcgta cgaggaacag ttttccaaaa 3120 cgctgagctc gtggagggag cctgttgagt tctcgccgat cgggcaacac gaagtgacgt 3180 ctgcgtatgc taaggtccta gatctgcgag tcgagaaacg tgaagcccca atcccgtttt 3240 ttccagacca gaacctgtcc cctggcttct tggcgcaaaa gatgtacgtc ggccaccgaa 3300 cgacgacgcg accactgcga tcttacgtcg atcaaattga ccgaatccta cgcggcgaca 3360 cggtaatgag gggtatcctt acgtcaagtg cgatcatgag cctactcgaa aagattggct 3420 tcgatcacga tccgaccgat ctcgctacag tctttgagct gctgaatctt gaaccgcgag 3480 ttgcacgacg cctagcggag ttcgtcacga gtgacagact acgctttgat gtgcatctgt 3540 taaaccggcg gggaatcggg ggtgacgagt tttcgatgtc tctcgacgtt tgtaccgagg 3600 gttcgcgcga cgagcggatc gactgtccac ccgagttcac gcctgtcgag agagacgccg 3660 tctcactcca tggagaacaa atccagatgc tttacgcctc ccacttcggc agctcgtgtc 3720 gagtagtctt tcaggtacga cccgagcatc gatcggccct aagacgcatc cgtgttaaaa 3780 tgcgtgcgcc tcgccagcgt atcgtccgaa gtgcgagtcg cgcagtgcga tctgcgtcgc 3840 aggcgctcgc tgagggacag ttcctgtaag gggacgttcc gcctgacata atcctac 3897 //