ID   HM454196; SV 1; linear; genomic RNA; STD; VRL; 858 BP.
XX
AC   HM454196;
XX
DT   21-OCT-2010 (Rel. 106, Created)
DT   21-OCT-2010 (Rel. 106, Last updated, Version 1)
XX
DE   Papaya ringspot virus strain Avinashi coat protein gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-858
RA   Salma M., Kumar K., Angappan K., Balasubramanian P.;
RT   "Cloning of PRSV genes from the Tamil Nadu isolates";
RL   Unpublished.
XX
RN   [2]
RP   1-858
RA   Salma M., Kumar K., Angappan K., Balasubramanian P.;
RT   ;
RL   Submitted (02-JUN-2010) to the INSDC.
RL   Center For Plant Molecular Biology And Biotechnology, Department Of
RL   Biotechnology, Tamil Nadu Agriculture University, Marudamalai Main Road,
RL   Coimbatore, Tamil Nadu 641 003, India
XX
DR   MD5; 85774f0c4bf15b2a08fea9992314f00f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..858
FT                   /organism="Papaya ringspot virus"
FT                   /strain="Avinashi"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Tamil Nadu"
FT                   /collection_date="Mar-2009"
FT                   /PCR_primers="fwd_name: coat protein forward primer,
FT                   fwd_seq: tccaaraatgaagctgtggatgt, rev_name: coat protein
FT                   reverse primer, rev_seq: gttgcgcatacccaggagag"
FT                   /db_xref="taxon:12205"
FT   CDS             <1..>858
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:E3ULQ9"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:E3ULQ9"
FT                   /protein_id="ADO33172.1"
FT                   /translation="SKNEAVDVVLNDKLKEKEKERDKEREKEKKDKKDASDGGYVSTST
FT                   KTGERDRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKAVLNLNHLLQYNPQQIDISNTR
FT                   ATQSQFEKWYEGVRNDYALSDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDY
FT                   PIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDF
FT                   YEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSL
FT                   LGMRN"
XX
SQ   Sequence 858 BP; 299 A; 147 C; 212 G; 200 T; 0 other;
     tccaagaatg aagctgtgga tgtggttctc aatgataagc tgaaggagaa agaaaaagaa        60
     agagataaag agagagaaaa agaaaagaaa gacaagaagg atgctagtga cggaggttat       120
     gtgtcaacta gcacaaaaac tggagagaga gatagagatg tcaatgctgg gactagtggt       180
     acattcacag ttccaagaat caagtcattt actgataaaa tgattttgcc cagaattaag       240
     gggaaagctg tccttaattt gaatcatctt cttcagtata atccacagca aattgacatc       300
     tcaaacactc gtgccacaca atcacagttt gagaagtggt atgagggagt gaggaatgac       360
     tatgccctta gtgataatga aatgcaagtg atgttaaatg gcttaatggt ttggtgtatc       420
     gaaaatggta catctccaga catatctggt gtctgggtca tgatggatgg tgagactcag       480
     gtcgattacc caattaaacc attaattgaa catgcaactc cttcatttag gcaaatcatg       540
     gctcatttca gtaacgcggc agaagcatat atcgcgaagc gaaatgcaac tgagagatac       600
     atgccgcggt atggaatcaa gagaaatttg actgacatta gcctcgctag atatgctttc       660
     gatttctatg aggtgaactc aaaaacacct gatagagctc gagaggctca tatgcagatg       720
     aaggcagctg cactgcggaa cacaaatcgc agaatgtttg gaatggacgg cagtgtcagt       780
     aacaaggaag aaaacacgga gagacacaca gtggaagatg tcaatagaga catgcactct       840
     ctcctgggta tgcgcaac                                                     858
//