Dbfetch
ID HM448898; SV 1; circular; genomic DNA; STD; VRL; 2751 BP. XX AC HM448898; XX DT 29-JUN-2010 (Rel. 105, Created) DT 29-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Kenaf leaf curl virus segment DNA-A, complete sequence. XX KW . XX OS Kenaf leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2751 RA Ding M., Zhang Z.; RT "First report of Kenaf leaf curl virus infecting tomato in China"; RL Unpublished. XX RN [2] RP 1-2751 RA Ding M., Zhang Z.; RT ; RL Submitted (03-JUN-2010) to the INSDC. RL Yunnan Academy of Agricultural Sciences, Institute of Biotechnology and RL Genetics, Xueyun Road 9, Kunming, Yunnan 650223, China XX DR MD5; 71fb60d1d110ce2f08b469686d55916e. XX FH Key Location/Qualifiers FH FT source 1..2751 FT /organism="Kenaf leaf curl virus" FT /segment="DNA-A" FT /host="Lycopersicon esculentum" FT /isolate="YN377" FT /mol_type="genomic DNA" FT /country="China:Yunnan Province" FT /collected_by="Ming Ding" FT /collection_date="16-Nov-2006" FT /db_xref="taxon:449400" FT gene 129..476 FT /gene="AV2" FT CDS 129..476 FT /codon_start=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:D9MNI0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D9MNI0" FT /protein_id="ADJ19040.1" FT /translation="MWDPLVNEFPDTVHGFRCMLAIKYLQLLSEGYSPDTVGYDLIREL FT ISIVRSRNYVEASCRYRHFYPRVEGASPAELRQPLCNPCSCPHCPRHKISHVGEQAHEP FT QAQNVQDVQKS" FT gene 289..1059 FT /gene="AV1" FT CDS 289..1059 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D9MNI1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D9MNI1" FT /protein_id="ADJ19041.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPTGTPQDFGDVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVKVNNYVAYNQQEAGKYENH FT SENALMLYMACTRASNPVYATLKIRIYFYDSVTN" FT gene complement(1062..1466) FT /gene="AC3" FT CDS complement(1062..1466) FT /codon_start=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:D9MNI2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D9MNI2" FT /protein_id="ADJ19042.1" FT /translation="MHLRTGEPITAAQAWSGAYIWEVPNPLYFKILNHDNRPFTMNMDI FT ITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPRTGLFLRVFKTQVLKYLTNLGVISINA FT IIRAVDHVLWKKLEQTMYVDMTSEIKLNIY" FT gene complement(1159..1611) FT /gene="AC2" FT CDS complement(1159..1611) FT /codon_start=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:D9MNI3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D9MNI3" FT /protein_id="ADJ19043.1" FT /translation="MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYYLSIN FT CFNHAFTHRGTHHCSSSMEWRLYLGSSKSPLFQDPQPRQPSIHDEHGHHHNQDPIQLQP FT SESSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSPQVSHKSGCNLN" FT gene complement(1508..2600) FT /gene="AC1" FT CDS complement(1508..2599) FT /codon_start=1 FT /gene="AC1" FT /product="AC1 protein" FT /db_xref="GOA:D9MNI4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D9MNI4" FT /protein_id="ADJ19044.1" FT /translation="MATPNRFKINAKNYFLTYPKCSLTKEEALSQFLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCRNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYM FT EKDGDILDHGIFQVDGRSARGGCQSANDAYAEAINAGSKSQALNILKEKAPRDFLLQFH FT NLNSNLDRYFQEPTAPYVSPFSSSSFDQVPEELEEWAAENVVDAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYSVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWALKNAIFVTLQGPL FT YSGSNQSTAQGSEETQQEEESRS" FT gene complement(2149..2448) FT /gene="AC4" FT CDS complement(2149..2448) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D9MNI5" FT /protein_id="ADJ19045.1" FT /translation="MKMGLLTCMFSSSSKASSSAGTIDSSTSHPQVGQHISIQTFRELK FT AQAMSKPTWRKTETSLIMEFSKSMEDQLEEVASLPTTHMPRQSTQGPNLRPSIY" XX SQ Sequence 2751 BP; 688 A; 572 C; 670 G; 821 T; 0 other; accggatggc cgcgcgattt tttatgggcc cccccactaa ctgctgtctg ccaatcacat 60 gacgcgctca aagcttaaat aatttcccgc cgttataaat acttcggctc taagtatccg 120 cttgcaaaat gtgggatcca ctggtaaacg agttccccga tacggttcac gggtttcggt 180 gcatgttagc aatcaagtat ctccagttac tctctgaagg ctactccccc gacacggttg 240 gttacgatct gatacgtgaa ttaatttcta ttgtgcgttc caggaattat gtcgaagcgt 300 cctgcagata tcgtcatttc tacccccgcg tcgaaggtgc gtcgccggct gaacttcgac 360 agcccctatg caacccgtgc agttgtcccc actgtccgcg tcacaaaatc tcgcatgtgg 420 gcgaacaggc ccatgaaccg caagcccaga atgtacagga tgtacagaag tcctgatgtt 480 ccacgaggct gtgagggtcc atgtaaggtc caatcctttg agtctagaca cgatgtagtc 540 catataggga aggttatgtg tattagtgat gtcactcgcg gtactgggct gacccataga 600 gttgggaagc gtttttgtgt aaagtctgtc tatgtgttgg gtaagatatg gatggatgaa 660 aatatcaaga gcaagaatca cacgaacaat gtcatgtttt tccttgtccg tgatcgacgt 720 ccgaccggca cgcctcagga ttttggagat gtctttaaca tgtttgacaa cgagccaagt 780 acagcaactg tgaagaatgt gcatcgagat cgttaccagg tcttgaggaa gtggtatgca 840 actgtcactg gtggacagta tggagcaaag gaacaggctt tggttaagaa gtttgttaag 900 gtcaataatt atgttgctta caatcagcaa gaggctggga agtacgagaa ccattccgag 960 aatgccttga tgttgtatat ggcatgtacc cgtgcctcta atcctgtgta cgctaccctt 1020 aagattagga tctacttcta cgattctgta accaactgat attaataaat atttaatttt 1080 atttctgaag tcatgtctac atacatagtt tgctctaatt ttttccataa tacatgatca 1140 actgccctaa taatagcatt aattgagatt acacccagat ttgtgagata cttgaggact 1200 tgggttttga atacccttaa gaaaagacca gtccgagggt gtaaggtcgt ccagattcgg 1260 taggttagaa aacacttgtg cactcccaga gctctccgaa ggttgtagtt gaattggatc 1320 ctgattgtga tgatgtccat gttcatcgtg aatggacggt tgtcgtggtt gaggatcttg 1380 aaatagaggg gatttggaac ttcccagata taggcgccac tccatgcttg agctgcagtg 1440 atgggttccc ctgtgcgtaa atgcatggtt gaagcagttg atagacagat aataagaaca 1500 cccgcattca agatcgactc tcctcctcct gttgcgtttc ttcgcttccc tgtgctgtac 1560 tttgattgga acctgagtac agtggtcctt ggagggtgac gaagatcgca ttcttgagag 1620 cccaattctt tagtgcggtg ttcttttcct cgtcgaggaa ttctttatag ctgctattgg 1680 gaccaggatt gcataggaag attgtcggta tcccgccttt aatttgaact ggcttcccgt 1740 attttgtgtt ggattgccag tccctttggg cccccatgaa ctctttaaag tgttttagga 1800 agtgcgggtc gacgtcatcg atgacgctgt accacgcgtc gttgctgtag actttgggac 1860 tcaggtctag atgtccacat aagtagttgt gtgggcctaa tgatctggcc cacattgtct 1920 tcccggtacg actatctccc tcaatgacta tactttgggg tctcaagggc cgcgcagcgg 1980 catcgacaac gttctcggcc gcccactctt caagttcttc gggaacttga tcgaaagaag 2040 aggatgaaaa aggagaaaca taaggagctg ttggctcctg aaaataccta tctaaatttg 2100 aatttaaatt atgaaattga agtagaaagt ctcttggggc tttctccttt aatatattga 2160 gggcctgaga tttggaccct gcgttgattg cctcggcata tgcgtcgttg gcagactggc 2220 aacctcctct agctgatctt ccatcgactt ggaaaattcc atgatcaagg atgtctccgt 2280 ctttctccat gtaggttttg acatcgcttg agcttttagc tccctgaatg tttggatgga 2340 aatgtgctga cctacttggg gatgtgaggt cgaagaatct attgttcctg cactggaact 2400 tgccttcgaa ctggatgaga acatgcaagt gaggagtccc atcttcatga agctctctgc 2460 agattctaat gaattttttg gaagttgggg tttggagatt taagaattgg gaaagtgcct 2520 cttctttagt gagggagcac ttgggataag tgaggaaata atttttggca tttattttaa 2580 accgattggg ggttgccatg ttgactaagt caatcggtgt ctctcaattt gttctatgta 2640 tcggtgtatt ggagtcctat atatatggag actctaatgg cataattgta ataaaataat 2700 tataatttga aattcaaacg aaaaggctaa agcggccatc cgtctaatat t 2751 //