ID HM368372; SV 1; circular; genomic DNA; STD; VRL; 2759 BP.
XX
AC HM368372;
XX
DT 04-JUL-2010 (Rel. 105, Created)
DT 28-OCT-2012 (Rel. 114, Last updated, Version 2)
XX
DE Watermelon chlorotic stunt virus isolate LB1 segment DNA-B, complete
DE sequence.
XX
KW .
XX
OS Watermelon chlorotic stunt virus
OC Viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-2759
RX DOI; .1094/PDIS-04-12-0366-PDN.
RX PUBMED; 30727474.
RA Samsatly J., Sobh H., Jawjari M., Najjar C., Haidar A., Abou-Jawdah Y.;
RT "First Report of Watermelon chlorotic stunt virus in Cucurbits in Lebanon";
RL Plant Dis. 96(11):1703-1703(2012).
XX
RN [2]
RP 1-2759
RA Samsatly J., Abou-Jawdah Y., Sobh H.;
RT ;
RL Submitted (30-MAY-2010) to the INSDC.
RL Plant Protection, AUB, American University of Beirut-Bliss street - Hamra,
RL Beirut 7546, Lebanon
XX
DR MD5; 625bccad417f87a032b4504ca21af6ee.
XX
FH Key Location/Qualifiers
FH
FT source 1..2759
FT /organism="Watermelon chlorotic stunt virus"
FT /segment="DNA-B"
FT /host="Cucumis melo (melon)"
FT /isolate="LB1"
FT /mol_type="genomic DNA"
FT /country="Lebanon"
FT /collection_date="Nov-2009"
FT /db_xref="taxon:35341"
FT gene 522..1286
FT /gene="BV1"
FT CDS 522..1286
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /db_xref="GOA:D9J2U7"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR001530"
FT /db_xref="UniProtKB/TrEMBL:D9J2U7"
FT /protein_id="ADJ38377.1"
FT /translation="MPVIRRYDGTPHGTRGRKRKQFFRPFKSGLFRRRQASRRLFAEKP
FT REKLSRRCLEDVHSGPSYALMNQCDVTSYVTYPILGLEGNGGRRSDFIKLMNVRVSGTI
FT NVTPLPAEPMSDRSPMNGIFVLLLIVDRKPFVPEGVNVLPSFKELFGEYECVYGIPRVK
FT ENQRHRYRILGMWKQYVSGDDSAVQKDFTLRRNISGPRYNVWAAFKDIDQMSTGGNYKN
FT VSKNAILACNVWVSTVRSKCEVYSQFVLDYVG"
FT gene complement(1326..2321)
FT /gene="BC1"
FT CDS complement(1326..2321)
FT /codon_start=1
FT /gene="BC1"
FT /product="BC1 protein"
FT /db_xref="GOA:D9J2U8"
FT /db_xref="InterPro:IPR000211"
FT /db_xref="UniProtKB/TrEMBL:D9J2U8"
FT /protein_id="ADJ38378.1"
FT /translation="MIIYCVQSYLHLRIELRRKVPVENGMEGAYTVTNKYIHTKRTEYT
FT LTTDATPITLQFPSSIEQTRVRLLGRCMKIDHIIIEYRNQVPFNATGSVIIEIRDNRIS
FT DEEAAQAAFTFPIACNVDLHYFSSSFFSVAEQCPWEIVYRVEDSNVLNGVRFASFKAKL
FT RLSSARHSTDIMFKAPTIKILTKGYKEDCIDFWSVERGETRRRLLNPTPSAQSNRALSK
FT RPITILPGETWATKSHVGLPSASDSQSRDTYRSQSMRLDHTRSFTGTSYESDDTPYAGL
FT HRLQTATLDPGDSVSQTRSETFSRQDLESILENTINKCLIKNKNDNNQML"
XX
SQ Sequence 2759 BP; 698 A; 605 C; 683 G; 773 T; 0 other;
accgggtggc cgccggatcc catttgtgcg gaccccacac agtctccaaa tggcattttg 60
gtaatttccg tttactaaga tggttttttt gtaatttacg tttaattaaa aagagggacc 120
accgcactat cactctcttg gccaatcaaa ttgcaccctg attcttaagg ggataaattt 180
gggcctcggc ccaatttatc gatgtgacgg gacgtacgtc tgctttatga gattggcccg 240
caacgactgc tttgtctgac aggaccacat gtgacactga cagttctgtt ctttaacctt 300
aagaaaattc aaggaatttt cccgcctatt tcgcctcgag gagcaaacag tcgttggatg 360
cccgccacct gtcacttgtt cgttcgttcg atttccgttt ttcgattaat ttgtggtctc 420
tgtacatgtt ggcctgttat ttatgacagt gtggcgccca tactgaggtg tccaactggg 480
actgtattcg tattgagagg atatacgtat cctcccaagc tatgccagtg attcgtcgct 540
atgatgggac acctcatggt acgcgtggac gaaagcggaa gcagttcttt cgcccgttca 600
agtctggtct gtttagacgc cgtcaggcgt cgaggcgtct gtttgccgaa aagccacgcg 660
agaaactctc acgccgttgc ctggaggatg ttcacagtgg gccgtcttat gcactgatga 720
atcagtgcga cgtgacatct tatgtgacgt atcctattct cggtctagag ggcaacgggg 780
gacgtagaag tgactttatt aagctgatga acgtgcgcgt ttctggcacg atcaacgtga 840
cccctttgcc tgcagagccc atgtctgatc gttctcctat gaacggtata tttgttctac 900
ttttgattgt ggacaggaaa ccattcgtac ccgaaggtgt gaacgtattg cccagtttca 960
aggaactgtt cggcgagtat gaatgcgtct acggcattcc acgagtgaag gaaaatcagc 1020
gtcataggta caggattctg ggcatgtgga aacaatacgt cagcggtgac gatagtgcgg 1080
tgcagaagga ctttactttg cgaaggaaca tcagtggccc gagatacaac gtatgggcag 1140
cattcaaaga cattgatcaa atgtccacag gaggaaatta caagaacgtg agcaagaatg 1200
ccattcttgc ctgtaatgta tgggtctcta cagttcgttc gaaatgtgaa gtgtattcgc 1260
aatttgtact ggattatgtg ggctgaaata aaattcaatt ttatttatgc gttcaacaat 1320
cgttattaca gcatttgatt attatcgttt ttgttcttaa ttaggcactt attaatcgta 1380
ttttctaaaa tagattctag gtcctgcctc gagaaagtct ctgatcttgt ctgggagact 1440
gagtctcccg ggtctagcgt ggctgtttgt agtctgtgca gccctgcata tggcgtgtcg 1500
tcggactcat atgaggtccc cgtgaaactg cgtgtgtggt ccagtctcat cgactgggat 1560
ctgtacgtgt cgcgactttg agagtccgac gcagaaggca acccaacatg cgactttgtg 1620
gcccaagttt ctccaggtaa tatcgtaatt ggcctctttg acagggcccg attcgattgg 1680
gccgacgggg ttgggttgag cagccttcgt cgtgtttcgc ctcgttcaac ggaccagaag 1740
tctatgcagt cctccttgta accctttgtc aggatcttga tcgtcggagc cttgaacatg 1800
atgtccgttg aatgtcgtgc agaactcagt cgcaacttgg ctttgaaaga agcaaaccgg 1860
acaccgttca agacgttcga gtcctcgacc ctgtacacga tctcccaggg acactgctcg 1920
gcgactgaaa aaaacgacga agagaagtag tgaagatcta cgttgcaagc tatcgggaag 1980
gtgaaggcag cctgtgctgc ttcctcgtcg gagatacggt tgtcccgtat ctcaataatc 2040
acagatcccg ttgcgttaaa cgggacctgg tttctgtact caatgataat gtggtcgatc 2100
ttcatgcatc ttcccaacag acgcactctt gtctgctcga tcgaactggg aaactgaagg 2160
gttataggag tggcgtctgt agtgagcgta tattccgtcc tcttggtatg tatgtacttg 2220
ttagtgacgg tatacgcgcc ctccattccg ttctccacag gaacctttcg acgaagttca 2280
attctgaggt gcagatagct ctgcacacaa taaattatca ttaacacagg caaagcaaca 2340
agagaacgga gattattcta ttatataaaa taaggccccg caggggaaat actcaaaaca 2400
caccgagaaa ggacgtaatg ggcatactat ggcctaaagg atttttaagc gaaattaatt 2460
gagctgataa tcgtattggg tgttttggag tatttcataa actctaattc gttcgggcgt 2520
attaggaact ggtgttcgtc gtggagagaa ctcgaactga attcccaaat agaaaaaccc 2580
taatgaccga acaaatagat tggggagata aaataaggag aaaaaagctc tttcatgtac 2640
ggaactggag acacctccca gcccttctat ccctgtgaat tggagactgg agacaatata 2700
tagaagtagt atgatatatt actaggattt tgacacgtat gcggccatcc tataatatt 2759
//
File [/WEB-INF/themes/result_foot.jsp] not found