Dbfetch

Dbfetch

ID   HM352771; SV 1; linear; genomic RNA; STD; VRL; 714 BP.
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AC   HM352771;
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DT   03-OCT-2010 (Rel. 106, Created)
DT   03-OCT-2010 (Rel. 106, Last updated, Version 1)
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DE   Apple stem grooving virus isolate TS2 coat protein gene, complete cds.
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KW   .
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OS   Apple stem grooving virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae;
OC   Capillovirus.
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RN   [1]
RP   1-714
RX   DOI; 10.1007/s10658-010-9631-z.
RX   AGRICOLA; IND44407025.
RA   Wu Z.-B., Zheng Y.-X., Su C.-C., Chang C.-J., Jan F.-J.;
RT   "Identification and characterization of Apple stem grooving virus causing
RT   leaf distortion on pear (Pyrus pyrifolia) in Taiwan";
RL   Eur. J. Plant Pathol. 128(1):71-79(2010).
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RN   [2]
RP   1-714
RA   Jan F.-J.;
RT   ;
RL   Submitted (24-MAY-2010) to the INSDC.
RL   Department of Plant Pathology, National Chung Hsing University, 250 Kuo
RL   Kuang Rd., Taichung 402, Taiwan R.O.C.
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DR   MD5; 6483d9fd475faa932f6d691b97434d11.
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FH   Key             Location/Qualifiers
FH
FT   source          1..714
FT                   /organism="Apple stem grooving virus"
FT                   /host="Pyrus pyrifolia var. Hengshen (pear)"
FT                   /isolate="TS2"
FT                   /mol_type="genomic RNA"
FT                   /country="Taiwan"
FT                   /collection_date="Apr-2004"
FT                   /db_xref="taxon:28347"
FT   CDS             1..714
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:E2GGZ2"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:E2GGZ2"
FT                   /protein_id="ADN92572.1"
FT                   /translation="MSLEDVLQQARRHRVGVYLWKTHIDPAKEILTVPPPESFKEGESF
FT                   EGRELYLLLCNHYCKYLFGNVAVFGSSDKTQFPAVGFDTPPVHYNLTSTPKEGETEEQR
FT                   KAREGSSSEKTKIWRIDLSNVVPELKTFAATSRQNSLNECTFRKLCEPFADLAREFLHE
FT                   RWSKGLATNIYKKWPKAFEKNPWVAFDFATGLKMNRLTPDEKQVIDRMTKRLFRTEGQK
FT                   GVFEAGSESNLELEG"
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SQ   Sequence 714 BP; 214 A; 139 C; 178 G; 183 T; 0 other;
     atgagtttgg aagacgtgct tcaacaagcg aggcgccacc gggtaggagt gtatctctgg        60
     aagacacaca tagacccagc aaaggaaatt ctgacggttc ctccccctga aagttttaag       120
     gaaggtgaaa gctttgaagg cagagagctt taccttcttc tctgcaacca ttactgtaaa       180
     tatttgtttg gtaatgttgc tgtttttggg tcatctgata agacccagtt tcccgctgta       240
     ggatttgaca ctcccccggt tcactataat ctgacatcga ccccaaaaga aggagaaact       300
     gaagaacaaa ggaaggctag agagggatcg tctagcgaaa agacaaaaat ttggagaatc       360
     gacttgtcaa atgttgtccc tgaattgaaa acttttgctg ccacttccag gcagaactct       420
     ttgaacgaat gtacgttcag aaagctttgc gagccatttg ctgacttggc tcgtgaattt       480
     cttcatgaaa ggtggtcaaa aggattggcc accaacattt acaagaaatg gccaaaagct       540
     ttcgaaaaaa acccttgggt ggcatttgat tttgccacag gtctcaaaat gaatcgttta       600
     acacctgacg aaaagcaggt gattgatagg atgaccaaaa ggctttttcg tactgaagga       660
     cagaaggggg ttttcgaggc aggttcggag agtaacttgg aactggaggg ttag             714
//