ID   HM346960; SV 1; linear; genomic RNA; STD; VRL; 1615 BP.
XX
AC   HM346960;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Zanzibar11-1 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1615
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1615
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; 6fdec18f7b27404fd5f684809b069621.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1615
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Zanzibar11-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Zanzibar"
FT                   /collection_date="Oct-2008"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1512
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZE8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZE8"
FT                   /protein_id="ADW23672.1"
FT                   /translation="GPYIKWFMEGIGLEGLYKLVEPYQNKMASAPCVFAFVNKVGDDPI
FT                   IFKGVLRGEIVVPRGPNSFGWDPIFQPLNWRRTFADMMDEEKNMISHRFRALSLVRDFL
FT                   KNSSYFSFAKGVDRDFFIDAQAIDKDEIEAEITKLKEMWRHNKPTGTRSPFESKRLRAP
FT                   QVARVSELLKQLRDAGIQTSKRPCGEPDEGELASPESSEDEEQRTNKGKEPMESPTERN
FT                   QSEKLIGEEEEKHKKTRFRIRAGGGSEKRDDIDKISTNALEFRKSFKPPKVSQAAYVWI
FT                   PRSQRDNLTPDVIQNFLAYVPPSHAIDNQLASGVEVENWAIKVSKAYGVTIQEFYRTIL
FT                   PAWIVNCIVNGTSDERKNEKSWRAVELNAQGEDIDDSEYPMEPMYKFALPTMRKIMRNF
FT                   SSQAILMYQNSVTAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILA
FT                   ANVGRSKTKLFALAAPGDDNNVDKERHTTRDVSATRHSYAGAAIE"
FT   mat_peptide     376..1509
FT                   /product="coat protein"
XX
SQ   Sequence 1615 BP; 523 A; 263 C; 406 G; 423 T; 0 other;
     gggccataca tcaagtggtt tatggaaggg attggattgg aaggattgta taagttggtg        60
     gagccatatc agaataaaat ggctagcgct ccctgtgtgt ttgcttttgt gaataaagtt       120
     ggtgatgatc cgataatctt taagggtgtg ctaagaggtg agattgtggt accacgtgga       180
     ccaaattcat ttgggtggga cccaattttc cagccactta actggagaag gacatttgct       240
     gacatgatgg acgaagaaaa gaatatgata tctcatcgat ttcgagctct gtcgttagtg       300
     agagactttt tgaaaaactc aagctacttc agctttgcta agggcgttga tcgtgatttc       360
     tttattgatg ctcaagcaat tgacaaggat gagattgaag ctgagataac aaaattaaag       420
     gagatgtgga ggcacaacaa gccaactgga actcgaagtc catttgagtc aaagaggctt       480
     cgtgctcctc aagtggcccg tgtgagtgaa ctgcttaaac aactgagaga tgctgggata       540
     caaacaagta agaggccatg tggagaacct gatgaaggag aacttgctag cccagagtca       600
     agtgaagacg aggagcaacg aacaaataaa ggaaaagagc ctatggaatc acctactgaa       660
     cgaaatcaat cagagaaact tataggtgag gaggaagaga aacataaaaa gacaaggttc       720
     agaataagag ctggtggtgg aagtgagaag agagatgata tagataagat ctcaaccaac       780
     gctctagaat ttcgaaagag cttcaaaccg ccaaaagtgt cacaagcagc atatgtgtgg       840
     ataccgcgtt cgcaaagaga taatttgacg cctgatgtca tacagaactt tctagcgtac       900
     gtgcctccat cacatgctat agacaatcaa ttggcttctg gagttgaagt tgagaattgg       960
     gccattaaag tttcaaaagc ttatggggtt accattcaag agttttatag gacgatccta      1020
     cctgcttgga ttgtcaattg tattgtgaat gggactagcg atgaaaggaa gaatgagaaa      1080
     tcgtggagag ctgttgagtt aaatgcacag ggtgaggata ttgatgattc agaataccct      1140
     atggaaccaa tgtacaaatt tgctctcccg acaatgagga aaataatgag gaatttttcc      1200
     agccaagcaa ttctaatgta tcagaatagt gtgactgctg gaaaagcttt tgtaataaaa      1260
     gcagcccgaa atgctgggta tacaagcatt gaaaacaagt ggctgggtat tgacttccta      1320
     gccgaagcac aattgtcaca aagccaactt gatatcaaac atcaaatatt ggctgccaac      1380
     gttggtagaa gtaaaaccaa gttgtttgct ttagctgctc ctggtgatga taataatgtg      1440
     gataaagaaa ggcacactac gcgggatgtt agtgcaacta ggcatagcta tgcaggtgct      1500
     gctattgaat aaattaattt gaaagtcaag tttggtggag ttttaggtag cttgttatat      1560
     tttggttgtg aagccaagat atattcagga gccctttctc catatccttc tgtta           1615
//