ID   HM346959; SV 1; linear; genomic RNA; STD; VRL; 1615 BP.
XX
AC   HM346959;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Zanzibar13-1 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1615
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1615
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; dd65abfc313a24bd40900c2df21df301.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1615
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Zanzibar13-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Zanzibar"
FT                   /collection_date="Oct-2008"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1512
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZE7"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZE7"
FT                   /protein_id="ADW23671.1"
FT                   /translation="GPYIKWFLEGIGLEGLYKLVEPYQNRMASALCVFAFVNKVGDDPI
FT                   IFKGAIRGEIVMPRGPSSFGWDPIFQPLDWKRTFAEMMTEEKNMISHRYRALSLVRDFL
FT                   KSSSYFSFAKGLDRNIFIDVQAFDKDEIEAEITKLKELWRSNKPTKTRSPFESRRLRAP
FT                   QVARVDELLKQLKDAGIQTSKRPCGEPDEGEVASPELSEDEEQQTDKGKAPMEPPAERS
FT                   QSEKSKSENEEKQKKTRFRIRAGGESEKRDDIDKIPTNALEFRKSFKPPKVSQAAYVWI
FT                   PRSQRDNLTPDVIQNFLAYVPPSHAIDNQLASGVEVENWAIEVSKAYGVTIQEFYRTIL
FT                   PAWIVNCIVNGTSDERKNEKSWRAVELNAQGEDIDDSEYPMEPMYKFALPTMRKIMRNF
FT                   SSQAILMYQNSVTAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILA
FT                   ANVGRNKTKLFALAAPGDDNNVDKERHTTRDVSATRHSYAGAAIE"
FT   mat_peptide     376..1509
FT                   /product="coat protein"
XX
SQ   Sequence 1615 BP; 516 A; 264 C; 416 G; 419 T; 0 other;
     gggccataca tcaagtggtt cttggagggg attggactgg aaggactata taagttggtg        60
     gagccatatc agaatagaat ggctagtgct ctctgtgtgt ttgcttttgt aaataaagtt       120
     ggtgatgatc ctataatttt taagggtgcg ataagaggtg agattgtaat gccacgcgga       180
     ccaagttcgt ttggatggga tccaattttt cagccactgg attggaagag aacatttgct       240
     gagatgatga ctgaggagaa aaacatgata tcccatcgat atcgagcctt gtcgttggtg       300
     agagatttct tgaagagctc gagctatttt agttttgcaa agggcttaga tcgtaacatc       360
     tttattgatg ttcaagcatt tgacaaggat gagattgaag ctgaaataac aaaattgaag       420
     gaattgtgga ggagcaacaa gccaactaaa actcgaagtc cattcgagtc aaggaggctt       480
     cgcgcccctc aagtagctcg tgtggacgaa ctgctcaaac aactgaagga tgctgggata       540
     caaacaagta aaaggccatg tggagagcct gatgaagggg aagttgctag cccagagtta       600
     agtgaagacg aggagcagca gacggataaa gggaaagcgc ccatggagcc acctgctgaa       660
     cgaagtcaat cagagaagtc taaaagtgag aatgaggaga aacagaaaaa gacaagattc       720
     agaataagag ctggtggtga gagtgaaaag agagatgata tagataagat accaaccaat       780
     gctctagaat ttcgaaagag cttcaagcca ccaaaggtgt cgcaagcagc atatgtgtgg       840
     ataccacgtt cgcaaagaga taatttgaca cctgatgtca tccagaactt tctagcgtac       900
     gtgcctccat cacatgctat agacaatcaa ttggcttctg gagttgaagt tgaaaattgg       960
     gctatcgaag tctcaaaagc ttatggagtt accattcaag agttttatag aacgatccta      1020
     cctgcttgga ttgtcaattg tattgtgaat gggactagtg atgagaggaa gaatgagaaa      1080
     tcgtggagag ctgttgagct aaatgcacag ggtgaggaca ttgatgattc agaataccct      1140
     atggaaccaa tgtataaatt tgctctcccg acaatgagga aaataatgag aaatttttcc      1200
     agccaagcaa tattgatgta tcagaatagt gtgactgctg gaaaggcttt tgtgataaaa      1260
     gcagcccgaa atgccgggta cacaagcatt gaaaataagt ggttaggtat tgacttccta      1320
     gccgaagcac aattgtcaca aagccaactt gatattaaac atcaaatatt ggctgctaat      1380
     gttggtagaa ataaaactaa gttgtttgct ttagctgctc ctggtgatga taataatgtg      1440
     gataaagaaa ggcacactac gcgtgatgtt agtgcaacca ggcacagcta cgcgggtgcc      1500
     gctatcgaat aaattagttt gaaagtcaag tttggtggag ttttaggtag cttgttatgt      1560
     tttggttgtg aagccaagat gtattcagga gccctttctc catatccttc tgtta           1615
//