ID   HM346957; SV 1; linear; genomic RNA; STD; VRL; 1615 BP.
XX
AC   HM346957;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Zanzibar8-2 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1615
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1615
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; e99bd18b086cacd88386fad1a37ae5e6.
DR   EuropePMC; PMC6472602; 31007377.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1615
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Zanzibar8-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Zanzibar"
FT                   /collection_date="Oct-2008"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1512
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZE5"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZE5"
FT                   /protein_id="ADW23669.1"
FT                   /translation="GPYIKWFMEGIGLKGLYKLVEPYQNKMGSALCVFAFVNKVGDDPI
FT                   IFKGVLRGEIVMPRGPKSFGWDPIFQPLNWRRTFAEMMTDEKNMISHLFPALSLVRDFL
FT                   KDSSYFSFAKGVDRDLFIDVQAVDEGEIEAEITKLKELWRSNKPTRTRSPFESRRLRAP
FT                   QVARVNELLLQLKDAGIQTSKRPCGEPDEGEVANPESVEDEEQRTDKGKVPMEPPAERS
FT                   QSEKSIGEDEEKQKKTRSKIRAGGGSEKRDDIDKIPTNALEFRKSFKPPKVSQAAYVWI
FT                   PRSQRDNLTPDVIQNFLAYVPPSHAIDNQLASGVEVENWAIEVSKAYGVTIQEFYRTIL
FT                   PAWIVNCIVNGTSDERKNEKSWRAVELNAQGEDIDDSEYPMEPMYKFALPTMRKIMRNF
FT                   SSQAILMYQNSVTAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILA
FT                   ANVGRNKTKLFALAAPGDDNNVDKERHTTRDVSATRHSYAGAAIE"
FT   mat_peptide     376..1509
FT                   /product="coat protein"
XX
SQ   Sequence 1615 BP; 518 A; 258 C; 409 G; 430 T; 0 other;
     gggccataca tcaagtggtt tatggaaggg attggactaa aagggttata taagttggtg        60
     gagccatatc aaaataaaat gggtagtgct ctctgtgtgt ttgcttttgt gaataaagtt       120
     ggtgatgatc ctataatttt caagggtgtg ctaagaggtg agattgtaat gccacgtgga       180
     ccaaagtcat ttgggtggga cccaatcttt cagccactta actggagaag gacatttgct       240
     gagatgatga ctgatgaaaa gaatatgatt tctcatctat ttccagctct gtcattggtg       300
     agagactttt tgaaggactc gagctatttc agctttgcaa agggtgttga tcgtgatctc       360
     tttattgatg ttcaagcagt tgacgagggt gagattgaag ctgaaataac aaaattaaag       420
     gaattgtgga ggagcaacaa gccaactaga actcggagtc catttgaatc aagaaggctt       480
     cgtgcccccc aagtagcccg tgtgaatgaa ctgcttctac aactgaaaga tgctgggata       540
     caaacaagca aaaggccgtg tggagaacct gatgaagggg aagttgctaa tccagagtca       600
     gtggaagacg aggagcaacg aacagataaa ggaaaagtac ctatggagcc acctgctgag       660
     cgaagtcagt cagaaaagtc tataggtgag gatgaggaga aacagaaaaa gacaagatcc       720
     aaaataagag ctggtggtgg aagtgaaaag agagatgata tagataagat tccaaccaat       780
     gctctagaat ttcggaagag cttcaaacca ccaaaggtgt cacaagcagc atatgtgtgg       840
     ataccgcgtt cgcaaagaga taatttgaca cctgatgtca tacagaactt tctagcgtac       900
     gtgccaccgt cacatgctat agacaatcaa ttggcttctg gagttgaagt tgagaattgg       960
     gcaattgaag tatcaaaagc ttatggagtc accattcagg agttttatag aacgatctta      1020
     cctgcttgga ttgtcaattg tattgtgaat gggactagtg atgagaggaa gaatgagaaa      1080
     tcgtggagag ctgttgagct aaatgcacag ggtgaggata ttgatgattc agaataccct      1140
     atggaaccaa tgtataaatt tgctctcccg acaatgagga agataatgag aaatttttcc      1200
     agccaagcaa ttttgatgta tcagaatagt gtgactgctg gaaaagcttt tgtgataaaa      1260
     gcagcccgaa atgctgggta cacaagtatt gaaaataaat ggttaggtat tgacttccta      1320
     gccgaagcac aattgtcaca aagccaactt gatattaaac atcaaatatt ggctgctaat      1380
     gttggcagaa ataaaactaa gttgtttgct ttagctgctc ctggtgatga taataatgtg      1440
     gataaagaaa ggcacaccac gcgtgatgtt agtgcaacca gacacagcta cgcgggtgcc      1500
     gctattgaat aaattagttt gaaagtcaag tttggtggag ttttaggtag cttgttatgt      1560
     tttggttgtg aagccaagat atattcagga gccctttctc catatccttc tgtta           1615
//