ID   HM346956; SV 1; linear; genomic RNA; STD; VRL; 1614 BP.
XX
AC   HM346956;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Zanzibar6-2 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1614
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1614
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; b8e45dc4a74327ef396a694076d28a67.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1614
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Zanzibar6-2"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Zanzibar"
FT                   /collection_date="Oct-2008"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1512
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZE4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZE4"
FT                   /protein_id="ADW23668.1"
FT                   /translation="GPYIKWFMEGIGLEGLYKLVEPYQNKMASALCVFAFVNKVGDDPI
FT                   IFKGVLRGEIVMPCGPNSFGWDPIFQPLNWRRTFAEMMTEEKNMISHRFRALSLVRDFL
FT                   KNSSYFSFAKGVDRDLFIDVQAIDKDEVEAEITKLKELWRNNKPTRTRSPFESRRLRVP
FT                   QVARVNELLKQLKDAGIQTSKRPCGEPDEGEAASPESSEDEEQRTDKGKTPMEPPAERG
FT                   QSENPIGEDEEKHKKTRFRLRAGGGSEKRDDIDKIPTNALEFRKSFKPPKVSQAAYVWI
FT                   PRSQRDNLTPDVIQNFLAYVPPSHAIDNQLASGVEVENWAIEVSKAYGVTIQEFYRTIL
FT                   PAWIVNCIVNGTSDERKNEKSWRAVELNAQGEDIDDSEYPMEPMYKFALPTMRKIMRNF
FT                   SSQAVLMYQNSVTAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILA
FT                   ANVGRSKTKLFALAAPGDDNNVDKERHTTRDVSATRHSYAGAAIE"
FT   mat_peptide     376..1509
FT                   /product="coat protein"
XX
SQ   Sequence 1614 BP; 525 A; 264 C; 398 G; 427 T; 0 other;
     gggccataca tcaagtggtt tatggaaggg attggactag aaggattata taagttggtg        60
     gagccgtatc agaacaaaat ggctagtgct ctctgtgtgt ttgcttttgt aaataaagtt       120
     ggtgatgatc ctataatctt taagggcgtg ctaaggggtg agattgtaat gccatgcggg       180
     ccaaattcat ttgggtggga tccaattttt cagccactta actggagaag gacatttgct       240
     gagatgatga ccgaggagaa gaatatgata tctcatcgat ttcgagcttt gtcgttagtg       300
     agagattttt tgaagaactc gagctatttt agctttgcaa agggcgttga tcgcgatctc       360
     ttcattgatg ttcaagcaat tgacaaagat gaggttgagg ctgaaataac aaaattgaag       420
     gaattgtgga ggaacaacaa gccaactaga actcgaagtc catttgaatc aaggaggctt       480
     cgtgttcctc aagtagctcg tgtgaatgag ctgcttaaac aactgaaaga tgctgggata       540
     caaacaagta aaaggccatg tggagaacct gatgaagggg aagctgctag cccagagtca       600
     agtgaagacg aggagcaacg cacagacaaa ggaaaaacgc ctatggaacc acctgctgag       660
     cgaggtcaat cagagaatcc tataggtgag gatgaggaga aacacaaaaa gacaaggttc       720
     agattaagag ctggcggtgg aagtgaaaag agagatgata tagataaaat tccaaccaac       780
     gctctagaat ttcggaagag cttcaaacca ccaaaagtgt cacaagcagc atatgtatgg       840
     ataccgcgtt cgcaaagaga taatttgaca cctgatgtca tacagaactt tctagcgtac       900
     gtacctccat cacatgctat agacaatcaa ttagcttctg gagttgaagt tgagaattgg       960
     gccatcgaag tttcaaaggc ctacggagtt accattcaag agttttatag aacgatccta      1020
     cctgcttgga ttgtcaattg cattgtgaat ggaactagtg atgaaagaaa gaatgagaag      1080
     tcttggagag ctgttgagct aaatgcacag ggtgaggata ttgatgattc agaataccct      1140
     atggaaccaa tgtataaatt tgctctcccg acaatgagga aaataatgag aaatttttcc      1200
     agccaagcag ttttaatgta tcaaaatagt gtgactgctg gaaaagcttt tgtgataaaa      1260
     gcagcccgaa atgccgggta cacaagcatt gaaaataagt ggttaggtat tgacttccta      1320
     gccgaagcac aattatcaca aagccaactt gatatcaaac atcaaatatt ggctgctaat      1380
     gttggtagaa gtaaaactaa gttgttcgct ttagctgctc ctggtgatga taataatgtg      1440
     gataaagaaa ggcacactac acgggatgtt agtgcaacta ggcatagcta tgcaggtgct      1500
     gctattgaat aaattaattt gaaagtcaag tttggtggag ttttaggtag cttgttatat      1560
     tttggttgtg aagccaagat atattcagga gccctttctc catatccttc tatt            1614
//