ID   HM346954; SV 1; linear; genomic RNA; STD; VRL; 1615 BP.
XX
AC   HM346954;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Naliendele3-1 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1615
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1615
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; a05ddbe7d58499c146e94609db19df47.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1615
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Naliendele3-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Tanzania:Naliendele"
FT                   /collection_date="Nov-2007"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1512
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZE2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZE2"
FT                   /protein_id="ADW23666.1"
FT                   /translation="GPYIKWFMEGIGLEGLYKLVEPYQNKMASALCVFAFVNKVGDDPI
FT                   IFKGVLRGEIVMPRGPKSFGWDPIFQPLNWRRTFAEMMAEEKNMISHRFRALSLVRDFL
FT                   KDSSYFSFAKGVDRDLFIDVQAVDKGEIEAEITKLKELWKNNKPTKTRSPFESRRLRAP
FT                   QVARVNELLQQLKDAGIQTSKRPCGEPDEGEVASPESSEDEEQQTDKGKAPMESPTELN
FT                   QSEKSVGESEEKHKKTKFKIRAGGGNEKRDDIDKIPTNALEFRKSFKPPKVSQAAYVWI
FT                   PRSQRDNLTPDVIQNFLAYVPPSRAIDNQLASGVEVENWAIEVSKAYGVTIQEFYRTIL
FT                   PAWIVNCIVNGTSDERKNEKSWRAVELNAQGEDIDDSEYPMEPMYKFALPTMRKIMRNF
FT                   SSQAILMYQNSVSAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILA
FT                   ANVGRSKTKLFALAAPGDDNNVDKERHTTRDVSATRHSYAGAAIE"
FT   mat_peptide     376..1509
FT                   /product="coat protein"
XX
SQ   Sequence 1615 BP; 525 A; 257 C; 403 G; 430 T; 0 other;
     gggccataca ttaagtggtt tatggaaggg attggattgg aaggattata taagttggtg        60
     gagccgtatc agaataaaat ggctagtgct ctctgtgtgt ttgcttttgt gaataaagtt       120
     ggcgatgatc ctataatctt caagggtgtg ctaagaggtg agattgtaat gccacgcgga       180
     ccaaagtcat ttgggtggga cccaattttt cagccactta attggagaag aacatttgct       240
     gagatgatgg ctgaggagaa gaacatgata tctcatcggt ttcgagcttt gtcgttggta       300
     agagattttt taaaggactc gagttatttc agctttgcaa agggcgttga tcgtgatctt       360
     ttcattgatg ttcaagcagt tgacaagggt gagattgaag ctgaaataac aaaattgaag       420
     gaattgtgga agaacaacaa gccaactaaa actcggagtc catttgagtc aaggaggctt       480
     cgtgcccctc aagtagctcg tgtgaatgaa ctgcttcaac aactgaaaga tgctgggata       540
     caaacaagta aaaggccgtg tggagagcct gatgaagggg aagttgctag cccagaatca       600
     agtgaagacg aggagcaaca aacggacaaa ggaaaagcgc ctatggaatc gccaactgaa       660
     ttgaatcaat cagagaagtc tgtgggtgaa agtgaggaaa aacataaaaa gacaaaattc       720
     aaaataagag ctggtggtgg aaatgagaag agagatgata tagataaaat tccaaccaac       780
     gctctagaat tccggaagag cttcaaacca ccaaaagtgt cacaagcagc atatgtatgg       840
     ataccacgtt cgcaaagaga taatttgaca cctgatgtca tacagaattt tctagcgtac       900
     gtgcctccat cacgtgctat agacaatcaa ttggcttctg gagttgaagt tgagaattgg       960
     gccattgagg tttcaaaagc ttatggagtc accattcaag agttttatag aacgatccta      1020
     ccagcttgga ttgttaattg tattgtgaat gggactagtg atgaaaggaa gaatgagaaa      1080
     tcgtggagag ctgttgagct aaatgcgcag ggtgaggata ttgatgattc agaataccct      1140
     atggaaccaa tgtacaaatt tgctctcccg acaatgagaa aaataatgag aaatttttcc      1200
     agccaagcaa tcctaatgta tcagaatagt gtgtctgctg gaaaagcttt tgtaataaaa      1260
     gcagcccgaa atgccgggta tacaagcatt gaaaataagt ggttgggtat tgacttccta      1320
     gccgaagcac aattgtcaca aagccaactt gatatcaaac atcaaatatt ggctgctaat      1380
     gttggtagaa gtaaaactaa gttgtttgct ttagctgctc ctggtgacga taataatgtg      1440
     gataaagaaa ggcacactac gcgggatgtt agtgcaacta ggcacagcta cgcaggtgct      1500
     gctattgaat aaattaattt gaaagtcaag tttggtggag ttttaggtaa cttgttatat      1560
     ttcggttgtg aagccaagat atattcagga gccctttctc catatccttt tgtta           1615
//