ID   HM346953; SV 1; linear; genomic RNA; STD; VRL; 1614 BP.
XX
AC   HM346953;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Nampula1-1 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1614
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1614
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; e882d73ac9b0cce442130f82d30716a5.
DR   EuropePMC; PMC6472602; 31007377.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1614
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Nampula1-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Mozambique:Nampula"
FT                   /collection_date="Nov-2007"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1512
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZE1"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZE1"
FT                   /protein_id="ADW23665.1"
FT                   /translation="GPYIKWFMEGIGLEGLYKLVEPYQNKMASALCVFAFVNKVGDDPI
FT                   IFKGVLRGEIVVPRGPNSFGWDPIFQPLNWRRTFAEMMDEEKNMISHRFRALSLVRDFL
FT                   KDSSYFSFAKGVDRDLFIDAQAIDKDEIEAEITKLKEMWRNNKPTRTRSPFESKRLRAP
FT                   QVARVNELLKQLKDAGIQTSKRPCGEPDEGEVASPESSEDEEQRTNKGKEPMESPTERN
FT                   QSEKSTGEEEEKHKETRFRIRAGGGSEKRDDIDKIPTNALEFRKSFKPPKVSQAAYVWI
FT                   PRSQRDNLTPDVIQNFLAYVPPSHAIDNQSASGVEVENWAIEVSKAYGVTIQEFYRTIL
FT                   PAWIVNCIVNGTSDERKNEKSWRAVELNAQGEDIDDSEYPMEPMYKFALPTMRKIMRNF
FT                   SSQAILMYQNSVTAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILA
FT                   ANVGRSKTKLFALAAPGDDNNVDKERHTTRDVSATRHSYAGAAIE"
FT   mat_peptide     376..1509
FT                   /product="coat protein"
XX
SQ   Sequence 1614 BP; 533 A; 262 C; 400 G; 419 T; 0 other;
     gggccataca ttaagtggtt tatggaaggg attggattag aaggattgta taagttggta        60
     gagccatatc agaataaaat ggctagcgct ctctgtgtat ttgcttttgt gaataaagtt       120
     ggtgatgatc cgataatctt taagggtgtg ctaagaggtg agattgtggt accacgcgga       180
     ccaaattcat ttgggtggga cccaattttt cagccactta actggagaag gacatttgct       240
     gagatgatgg acgaagagaa gaatatgata tctcatcgat ttcgagctct gtcgttagta       300
     agagactttt tgaaggactc aagctatttc agctttgcaa agggtgttga tcgtgatctc       360
     ttcattgatg ctcaagcaat cgacaaggat gagattgaag ctgaaataac aaaattaaag       420
     gaaatgtgga ggaacaacaa gccaactaga actcgaagtc catttgaatc aaagaggctt       480
     cgtgctcctc aagtggcccg tgtgaatgaa ctgcttaaac aactgaaaga tgctgggata       540
     caaacaagta agaggccatg tggagaacct gatgaaggag aagttgctag cccagagtca       600
     agtgaagacg aggagcaacg aacaaataaa ggaaaagagc ctatggaatc acctactgaa       660
     cgaaatcaat cggagaaatc tacaggtgag gaggaggaga aacataaaga gacaaggttc       720
     agaataagag ctggtggtgg aagtgaaaag agagatgata tagataagat cccaaccaac       780
     gctctagaat ttcgaaagag cttcaaaccg ccaaaagtgt cacaagcagc atatgtgtgg       840
     ataccacgtt cgcaaagaga taatttgacg cctgatgtca tacagaactt tctagcgtac       900
     gtgcctccat cacacgctat agacaatcaa tcggcgtctg gagttgaagt tgagaattgg       960
     gccattgaag tttcaaaagc ttatggggtt accattcaag agttttatag aacgatccta      1020
     cctgcttgga ttgtcaattg tattgtgaat ggaactagcg atgaaaggaa gaatgagaaa      1080
     tcgtggagag ctgttgagtt aaatgcacag ggtgaggata ttgatgattc agaatatcct      1140
     atggaaccaa tgtacaaatt tgctctcccg acaatgagga aaataatgag aaatttttcc      1200
     agccaagcaa ttctaatgta tcagaatagt gtaactgctg gaaaagcttt tgtaataaaa      1260
     gcagctcgaa atgctgggta tacaagcatt gaaaacaagt ggctgggtat tgacttccta      1320
     gccgaagcac aattgtcaca aagccaactt gatatcaaac atcaaatatt ggctgcaaat      1380
     gttggtagaa gtaaaactaa gttgtttgct ttagctgctc ctggcgatga caataatgtg      1440
     gataaagaaa ggcacaccac gcgggatgtt agtgcaacta ggcatagcta tgctggtgct      1500
     gctattgaat aaattaattt gaaagtcaag cttggtggag ttttaggtag cttgttatat      1560
     tttggttgtg aagccaagat atattcagga gccctttctc catatccttc tgtt            1614
//