ID   HM346952; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   HM346952;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Kabanyoro4-3 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1677
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1677
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; 0b59801df4a03fbb7d8d116ad5361f55.
DR   EuropePMC; PMC3458115; 23049780.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Kabanyoro4-3"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda:Kabanyoro"
FT                   /collection_date="May-2007"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1479
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZE0"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZE0"
FT                   /protein_id="ADW23664.1"
FT                   /translation="GPYIKWFLKELGLEGVVKMLAAFGDKSAYALCTFAYVHNESSDPI
FT                   VFKGVVNGEIVPPRGNNGFGWDPIFKPDECSCTFAEMSSSMKNDFSHRRRALEKVKSFL
FT                   DNLVVKQEEKKARVALTIDVQALNQEEVEAEITALKKLWRDNGPTRTRSPFEARRLRAP
FT                   QVERVNELLQKLKDEGLQTKKRPCGEPDDGEVVDDDSDDGNNQRSGKEVIDESQNNQQV
FT                   DPRKPKFKIRGDGSAVRRDDIDKIPTNALEIKKTFKPPKVSQSAYIWIPRSQRDNLTPD
FT                   VIQNFLAYVPPSHAIDNQLASGIEVENWAIEVAKAYGVNIQEFYRTILPAWIVNCIVNG
FT                   TSDERKNEKSWRAVELNSQGEDVDDFEYPMEPMYKFALPTMRKVMRNFSSQAILMYQNS
FT                   VAAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILAANVGRTKTRLF
FT                   ALAAPGDDNSVDRERHTTHDVSANRHSYSGAAIE"
FT   mat_peptide     376..1476
FT                   /product="coat protein"
XX
SQ   Sequence 1677 BP; 543 A; 247 C; 419 G; 468 T; 0 other;
     gggccataca tcaagtggtt tttaaaagaa ttgggtcttg aaggtgttgt caaaatgctg        60
     gcagcatttg gagataagtc agcgtacgca ctatgtacat ttgcatatgt gcacaatgag       120
     tcgtctgatc caattgtgtt taaaggagtt gtgaatggtg aaattgtgcc accgcgaggt       180
     aacaatggtt ttggttggga tcctatattc aaacctgatg aatgtagttg tacgtttgca       240
     gaaatgtcaa gcagcatgaa gaatgatttt tcccatagaa gaagagcttt agagaaagtc       300
     aaatcatttc ttgataactt ggtggtgaag caagaggaga agaaggcaag ggtggctcta       360
     acgattgatg ttcaggctct gaatcaggag gaagtagaag cagagatcac tgctttaaag       420
     aagctgtgga gagataatgg gccaacaagg acgcgtagtc catttgaggc taggagattg       480
     agagccccac aagttgagcg tgtgaatgag ttacttcaga aactgaaaga tgaaggattg       540
     caaacaaaga agaggccatg tggagaacca gatgatgggg aagtggtgga tgatgatagt       600
     gatgatggta ataatcagag atctggaaag gaagttattg atgaaagcca gaataatcag       660
     caagttgatc caagaaagcc aaaattcaaa attagaggag atggaagtgc tgttagacgg       720
     gatgacattg ataaaattcc aactaatgct cttgagatca agaaaacatt taagcctcca       780
     aaggtttcac aatcagctta catttggatt ccacgctccc agagggataa tctgactcct       840
     gatgtaattc agaatttctt ggcatatgta cctccatctc atgcaataga taatcaactt       900
     gcttcaggaa ttgaagttga gaactgggca attgaggttg ctaaagcata tggagttaat       960
     atacaggaat tttatcgcac aattttgcca gcttggattg tgaactgtat agtgaacggt      1020
     actagcgatg aaaggaagaa tgagaagtca tggcgagcag ttgaattgaa ttctcagggg      1080
     gaagatgttg atgattttga gtatccaatg gagccaatgt acaaatttgc attgccaact      1140
     atgaggaagg ttatgagaaa cttctctagc caagctatcc tcatgtatca gaatagtgtt      1200
     gctgcaggta aggcgtttgt gataaaagct gctagaaatg ctggatacac aagcattgaa      1260
     aataaatggc taggtataga ttttcttgcc gaggctcaat tgtctcagag tcaacttgat      1320
     atcaagcatc agattctggc agcgaatgtt ggtagaacaa agacaagact gtttgcatta      1380
     gcagctcctg gagatgataa tagtgtagat agagaaaggc acacgacaca cgatgtcagt      1440
     gcaaacaggc acagctacag tggtgccgca attgaataaa tgaaatatta ggttttctga      1500
     ttgggtttga atgagattat agcttagttg gaaagctaag ttatatttca aatttaaatt      1560
     caaatactta aatattgtat ttcgttttca agtttggtgg agttttggat agccaattac      1620
     attttggtta gataagccag aatgtatctt ggagatcttt ctccatatcc ttctgtt         1677
//