ID   HM346950; SV 1; linear; genomic RNA; STD; VRL; 1677 BP.
XX
AC   HM346950;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Chumani21-1 polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1677
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1677
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; 5516bd35d88346fa85804b19703acc37.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1677
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Chumani21-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Kenya:Chumani"
FT                   /collection_date="Oct-2008"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1479
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZD8"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZD8"
FT                   /protein_id="ADW23662.1"
FT                   /translation="GPYIKWFLKELGLDGVVKMLSAFGDKSAYALCTFAYAHNELSDPI
FT                   VFKGVVNGEIVPPRGNNGFGWDPIFKPDGCGCTFAEMPSSIKNDFSHRRRALEKVKLFL
FT                   DNLVVKQEEKKARVALTIDVQALNQEEIEAEITALKKLWKDNGPTRTRSPFEARRLRAP
FT                   QVERVNELLQKLKDEGLQTKKRPCGEPDDGEVVDDDSDGGNNQRSGKEVIDESQNNQQV
FT                   DPIKPKFKISGNGNAIRRDDIDKIPTNALEIKKTFKPPKVSQSAYIWIPRSQRDNLTPD
FT                   VIQNFLAYIPPSHAIDNQLASGIEVENWAIEVAKAYGVNIQEFYRTVLPAWIVNCIVNG
FT                   TSDERKNEKSWRAVELNSQGEDVDDFEYPMEPMYKFALPTMRKIMRNFSSQAILMYQNS
FT                   VAAGKAFVIKAARNAGYTSVENKWLGIDFLAEAQLSQSQLDIKHQILAANVGRTKTRLF
FT                   ALAAPGDDGNVDKERHTTHDVSANRHSYSGAAIE"
FT   mat_peptide     376..1476
FT                   /product="coat protein"
XX
SQ   Sequence 1677 BP; 553 A; 256 C; 406 G; 462 T; 0 other;
     gggccataca ttaagtggtt cttaaaagag ttgggtcttg atggtgttgt caaaatgctg        60
     tcagcatttg gagataaatc agcgtacgca ctatgtacat ttgcatatgc gcacaatgag       120
     ctatctgatc caattgtgtt caaaggagtt gtgaatggtg aaattgtacc accgcgaggt       180
     aataatggtt ttggctggga tcctatcttt aagcctgatg gatgtggttg tacgtttgca       240
     gaaatgccaa gcagcataaa gaatgatttt tctcacagaa gaagagcttt agagaaagtc       300
     aaattgtttc ttgataactt ggtggtgaag caagaggaga agaaagcaag ggtggctcta       360
     acaattgatg ttcaggcctt aaatcaggag gaaatagaag cagagattac tgctttaaag       420
     aagctgtgga aagataatgg gccaacaaga acgcgtagtc catttgaggc taggagattg       480
     agagccccac aagttgagcg tgtaaatgag ttacttcaga aactgaaaga tgaaggattg       540
     caaacaaaga agaggccatg tggagaacca gatgatgggg aagtggtaga tgatgacagc       600
     gatggtggta acaatcagag atctggaaag gaagttattg atgaaagcca gaataatcag       660
     caagttgatc caataaagcc aaaattcaaa attagtggaa atggaaatgc tattagacgg       720
     gatgacattg ataaaattcc aactaatgct cttgaaatta agaagacgtt caagcctcca       780
     aaggtgtcac agtcagctta catttggatt ccacgctctc aaagagacaa tctaacccct       840
     gatgttattc agaatttcct ggcatatata cctccatctc atgctataga taaccaactt       900
     gcctcaggaa ttgaagtaga aaattgggca attgaggttg ctaaagcata tggagttaat       960
     atacaggaat tttatcgcac agttttgcca gcttggatag tgaactgtat agtgaacggc      1020
     actagcgatg aaaggaaaaa cgagaagtca tggcgagcag tcgagttgaa ttctcaaggg      1080
     gaggatgttg atgattttga gtatccaatg gagccaatgt acaaatttgc attgccaact      1140
     atgaggaaga ttatgagaaa cttttctagc caagctatcc tcatgtatca gaatagtgtc      1200
     gctgcaggaa aggcgtttgt gataaaagct gctagaaatg ctggatacac aagtgttgaa      1260
     aacaaatggc taggtataga ctttctcgcc gaagctcaat tgtctcaaag tcaacttgac      1320
     atcaagcatc agattttggc agcaaatgtt ggtaggacaa agacaaggct gtttgcatta      1380
     gcagctcctg gggatgatgg taatgtagat aaagaaaggc acacgacaca cgatgtcagt      1440
     gcaaacagac acagttatag tggtgccgca attgaataaa taaaatatta gtgtttctag      1500
     ttaggtttga gtgagattat agcttagtta gaaagctaag ctatatttca aatttgaatt      1560
     taagtactta aatatcgtat tttattttca agtttggtgg agttttggat agccaattac      1620
     attttggttg ggtaagccaa aatgtatttt ggagatcttt ctccatatcc ttctgtt         1677
//