ID   HM346945; SV 1; linear; genomic RNA; STD; VRL; 1678 BP.
XX
AC   HM346945;
XX
DT   03-FEB-2011 (Rel. 107, Created)
DT   23-MAR-2011 (Rel. 108, Last updated, Version 2)
XX
DE   Cassava brown streak virus isolate Mriana8-1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
XX
RN   [1]
RP   1-1678
RX   DOI; 10.1099/vir.0.026922-0.
RX   PUBMED; 21169213.
RA   Mbanzibwa D.R., Tian Y.P., Tugume A.K., Patil B.L., Yadav J.S.,
RA   Bagewadi B., Abarshi M.M., Alicai T., Changadeya W., Mkumbira J.,
RA   Muli M.B., Mukasa S.B., Tairo F., Baguma Y., Kyamanywa S., Kullaya A.,
RA   Maruthi M.N., Fauquet C.M., Valkonen J.P.;
RT   "Evolution of cassava brown streak disease-associated viruses";
RL   J. Gen. Virol. 92(Pt 4):974-987(2011).
XX
RN   [2]
RP   1-1678
RA   Abarshi M.M., Maruthi M.N.;
RT   ;
RL   Submitted (20-MAY-2010) to the INSDC.
RL   Natural Resources Institute, University of Greenwich, Blake Building,
RL   Central Avenue, Chatham Maritime, Kent 44, England
XX
DR   MD5; 03884a45195104301fa315d348dcbbb3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1678
FT                   /organism="Cassava brown streak virus"
FT                   /host="Manihot esculenta"
FT                   /isolate="Mriana8-1"
FT                   /mol_type="genomic RNA"
FT                   /country="Kenya:Mriana"
FT                   /collection_date="Oct-2008"
FT                   /db_xref="taxon:137758"
FT   CDS             <1..1479
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:E9KZD3"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR002637"
FT                   /db_xref="InterPro:IPR029001"
FT                   /db_xref="UniProtKB/TrEMBL:E9KZD3"
FT                   /protein_id="ADW23657.1"
FT                   /translation="GPYIKWFLKELGLEGVVRMLSAFGDKSAYALCTFAYAHNESSDPI
FT                   VFKGVVNGEIVPPRGDNGFGWDPIFKPDGCGCTFAEMPSSIKNDFSHRRRALEKVKLFL
FT                   DNLVVKQEEKKARVALTIDVQALNQEEIEAEITALKKLWKDNGPTRTRSPFEARRLRVP
FT                   QVERVNELLQKLRDEGLQTKKRPCGEPDDGEVVDDDSDDGNNQRSGKEVVDESQNNQQV
FT                   DPRKQKFKIMGDGSAIRRDDIDKIPTNALEIKKTFKPPKVSQSAYIWIPRSQRDNLTPD
FT                   VIQNFLAYIPPSHAIDNQLASGIEVENWAIGVAKAYGVNIQEFYRTILPAWIVNCIVNG
FT                   TSDERKNEKSWRAVELNSQGEDVDDFEYPMEPMYKFALPTMRKIMRNFSNQAILMYQNS
FT                   VAAGKAFVIKAARNAGYTSIENKWLGIDFLAEAQLSQSQLDIKHQILAANVGRTKTKLF
FT                   ALAAPGDDNNVDRERHTTHDVSANRHSYSGAAIE"
FT   mat_peptide     376..1476
FT                   /product="coat protein"
XX
SQ   Sequence 1678 BP; 549 A; 246 C; 414 G; 469 T; 0 other;
     gggccataca tcaagtggtt tttaaaagaa ttgggtcttg aaggtgttgt tagaatgctg        60
     tcagcatttg gagataaatc agcgtacgca ttatgtacat tcgcatatgc gcacaatgag       120
     tcatctgatc caattgtgtt taaaggagtt gtgaatggtg aaattgtgcc accacgaggt       180
     gataatggtt ttggctggga tcctatcttt aagcctgatg gatgtggttg tacgttcgca       240
     gaaatgccaa gcagcatcaa gaatgatttt tctcacagaa gaagagcttt agagaaagtc       300
     aaattgtttc ttgataactt ggtggtgaag caagaggaga agaaggcaag ggtggctcta       360
     acgattgatg ttcaggcctt aaatcaagag gaaatagaag cagagattac tgctttaaag       420
     aagttgtgga aagataatgg accaacaagg acacgtagtc catttgaggc taggagactg       480
     agagtcccac aagttgagcg tgtaaatgag ttacttcaga aactgagaga tgaaggattg       540
     caaacaaaga agaggccatg tggagaacca gatgatgggg aagtggtgga tgatgacagc       600
     gatgatggta ataatcagag atctggaaag gaagttgttg atgaaagtca gaataatcag       660
     caagttgatc caagaaagca gaaatttaaa attatgggag atggaagtgc tattagacgg       720
     gatgacattg ataaaattcc aactaatgct cttgagatca agaagacgtt caagcctcca       780
     aaggtgtcac agtcagctta catttggatt ccgcgctctc aaagggataa tttgactcct       840
     gatgtaattc agaatttcct ggcatatata cctccatctc atgctataga taaccaactt       900
     gcttcaggaa ttgaagttga gaattgggca attggggttg ctaaagcata tggagttaat       960
     atacaggaat tttatcgcac aattttgcca gcttggatag tgaactgcat agtgaacggc      1020
     actagcgatg aaaggaaaaa tgagaagtca tggcgagcag tcgagttgaa ttctcagggg      1080
     gaagacgttg atgattttga gtatccaatg gagccaatgt ataaatttgc attgccaact      1140
     atgaggaaga ttatgagaaa cttctctaac caagcaatcc tcatgtatca gaatagtgtt      1200
     gctgcaggaa aggcgtttgt aataaaagct gctagaaatg ctggatatac aagtattgaa      1260
     aataaatggc taggtataga ttttcttgct gaagcccaat tgtctcagag tcaacttgat      1320
     atcaagcatc agattctggc agcgaatgtt ggcaggacaa agacaaaact gtttgcatta      1380
     gcagctcctg gagatgataa caatgtagat agagaaaggc acacgacaca cgatgtcagt      1440
     gcaaacaggc acagttacag tggtgccgca attgaataaa taaaatatta gtgtttctaa      1500
     ttgagtttaa atgagattat agcttagttg gagagctaag ttatatttca aatttgaatt      1560
     caagtactta aatattgtat tttgttttca agtttggtgg agttttggat agccaactat      1620
     attctggtta gataagccag gatgtatttt ggagatcttt ctccatatcc ttttgtta        1678
//